Strongylocentrotus purpuratus (purple sea urchin): 594243
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Entry
594243 CDS
T01019
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03022
Basal transcription factors
spu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
594243
09124 Replication and repair
03420 Nucleotide excision repair
594243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spu03021
]
594243
03400 DNA repair and recombination proteins [BR:
spu03400
]
594243
Transcription machinery [BR:
spu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
594243
DNA repair and recombination proteins [BR:
spu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
594243
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Lipoprotein_16
Motif
Other DBs
NCBI-GeneID:
594243
NCBI-ProteinID:
XP_030845510
UniProt:
A0A7M7P5H4
LinkDB
All DBs
Position
Unknown
AA seq
566 aa
AA seq
DB search
MAMSSEEVLLVVAQVRSRKSNGSLYLMGKRLAWQEDNKEVFTVSHYYADVKQQRISQDTS
SKVQLQILLHNGSSTKFHFANRDGSAAQKQDRNDVKELLQQLLPKFRSQASRELEEKNKM
LKDDPELFQLYRDLVMSGVMTADEFWASRINMSQQESAAASSASTSASDGGQGVGVSAAF
LSDIKPQTDGCNGVKYNLTADIIDSIFRIYPAVRKKHLESVPHTMSEKEFWTCFFQSQYF
HRDRINAGSKDLFAECAKKDEKDMTEEANQTVQDPLLDIQGLSDNTINEEFGFSLDNMMK
PNAVNKSIIKRFNHHNTRVLAASESNKRNLADDTDAPSTSSQSLSQNSNTNHRTDGGGGD
GDESSAKKARLREAIEIEDLSSSSKQDGVSLKLQRTDRYYHGPTVVQSTDYFSSEVVMGA
LRAVQSEVMSSVPNLHKVISSNTARSVMGELTPGGALMASLSTQPVHTMYSPETQKEVKR
LYSALAELLRHFWSCFPVTNRSLEEKVFRMKGTLEQFHAKKIKPFKDTLAKQHIGLNLVN
HMEELLQTAYKKYANWQSKKLGAKLS
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggccatgtcatcagaggaagtgttgctggtggtggctcaggtccgcagcaggaagagc
aatggtagcctgtatctcatggggaagcgtctggcctggcaggaggacaataaagaggtc
ttcacagtcagccattactacgcagacgtcaagcaacagagaatcagtcaggacaccagt
tccaaggtccagcttcagatcctgctccacaacgggtccagtaccaagttccactttgca
aaccgtgatgggtctgcggcccagaagcaggaccgtaatgacgtgaaggagctcctacag
cagctcctgcccaagttcaggagccaagctagcagagaactggaggagaagaataagatg
ctgaaggatgacccggaactgtttcagttgtaccgtgaccttgtgatgagtggtgtcatg
actgcagatgaattctgggccagccgcattaatatgtcccagcaagagagtgctgctgct
tcatctgcctcaacatcagccagtgatgggggtcaaggggtcggggtatcagcggccttc
ctctctgacattaaaccccaaacagacggctgcaacggagtcaagtacaacctcacagct
gacatcattgattctatattccgtatctatccggcagtgagaaagaagcatcttgagagt
gttccacatactatgtcagagaaagaattctggacgtgtttcttccagtcccagtatttc
caccgagatcgaatcaatgcaggaagcaaagacctcttcgctgagtgtgccaagaaggac
gagaaagatatgacagaggaagctaaccagactgtccaagacccactccttgatatccag
gggctgtctgacaacacaataaatgaggagtttggattttccttggataacatgatgaaa
cctaacgcagtcaataagtccatcatcaaacggttcaaccatcacaacacacgggtatta
gctgcttcagaatcaaataagagaaaccttgcagacgacactgatgcaccatcaaccagc
tcccaatctttgagccagaactccaacacaaaccaccggacagacggaggaggaggagac
ggagacgagagcagtgcaaagaaagccagattacgagaggccatcgagattgaggattta
tcgtcatcgtccaaacaagatggtgtctccttgaagctgcaaagaacagacaggtattac
catggtcccaccgttgtccagtctacagactacttctcatcagaggtggtgatgggtgcg
ttgagagccgttcaatctgaagtcatgtcatctgtgcctaatctacacaaggttatatcc
agtaacacagcgaggtcagtaatgggagaactaacaccaggaggtgcccttatggcatcc
ttatcaactcagcctgttcatactatgtacagccctgaaacccagaaagaagtaaagagg
ctgtattcagcattggcagagctcctgaggcatttctggtcgtgtttccccgtcaccaat
cgctcactggaggagaaggtcttcaggatgaagggcactctggaacagtttcatgccaag
aagattaagcctttcaaggatacactcgccaaacaacatataggactcaatctggtaaac
catatggaagagctccttcaaactgcgtacaagaaatacgcaaactggcaaagcaagaaa
ctaggcgccaagttatcatga
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