Strongylocentrotus purpuratus (purple sea urchin): 594440
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Entry
594440 CDS
T01019
Name
(RefSeq) protein SMG5
KO
K11125
protein SMG5
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
594440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spu03019
]
594440
03032 DNA replication proteins [BR:
spu03032
]
594440
Messenger RNA biogenesis [BR:
spu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
594440
mRNA cycle factors
Common to processing body (P body) and stress granule
594440
DNA replication proteins [BR:
spu03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
594440
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Cytokin_check_N
Chordopox_A30L
Motif
Other DBs
NCBI-GeneID:
594440
NCBI-ProteinID:
XP_030832851
UniProt:
A0A7M7N8J0
LinkDB
All DBs
Position
Unknown
AA seq
1098 aa
AA seq
DB search
MVKIGDSSEDGNESRISFKSDVERLQQTRRVYRSAQDLTHKLESIFRHKQAYRVVFEKDA
IEMRMRLRDLCERLMMLHPIDFGRKAEEILWWKVYYNVITLAKKSKKNIRSGSSLECAYR
THLLAATGFYHHLLMRLQWEYGLQENHVMDFISFPDQDQVKETCMDANKPEAKDWAQKAC
HRCLIYLGDLARYRQEFEGPSSCLLAQRFYHQALVLNPAVGMPHNQLGTLAGTRYQGLDA
AYHYLRCWLSDLRFDGAIANLEKVFERNQKRFHELPSSPSPDLPPELQRPRDIKQFLIRF
LYLQEMFQPSNKTSTDTLPSLCQEVLQGFHQCMLHGAVPHARQRDEEGRESYLSNDIIFK
LVVLTLMSTYRLQKAGSKQTSTAVVFTLALFSYTLNHLCEKLNNAIYRKIYPDQTTATFT
KAQDSDGSSDGRASPADTITPILSRDIDSDGTVKPAKKKQQKKKPKTVLKAMRRRRKRAG
LGAHTSEESDLSEGEPGEDNHSNGGSSGGESGEERVLAAESDSDYFMDSQELELDEEESS
ERHSLHEDSKTPPPGSGEESGLSIMSDITVEDISSQLIAPPTGPTHTPPGRRNIRLAPSF
DAYNKETMSAQSKEEGKETRERKGESPTGSTQTPPGRENRDTGGSSVTSASTSPSDLQTN
PIPLPLIMEILTSEGLLPVIKILTDWLRTNEDFIIKTAQSSQPLWARLASLLNMCPHEKS
LVNQDWCGSVGLRQLLEGSLESGKGKSWYQPMPLTEDIAIWTMPPLQYLQKKMKYGIHHE
LDLTLQEEVGDAITPKATSMLRVWDYLHPSASEIATYCSFLETCFVLFTVIRVLCLRQFG
YYLSSIDGISLSCDDDHFTSETVDLSDEQDEEELHQPDEDDEPQPSTRPEEKEEDIDARR
QQVMRGMAQLRLQSEVSQLEGSIEPLNMDALSPYLIPDTAVLSNQLPVLRSLVATSRFIV
IIPKAVVSQLDINKKHQPKAREAIKFMEKEFQIGNRYLRAQKDKENLRFDENSKVKIDDI
NVRTFCSIAECAHFFALRCGDPALRSPANPNPGGMVTILTHQEPSDDPRVTTTIDKLLNV
GVDVTTARDFQARWQAHT
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagattggagattcatccgaagatggaaacgaaagtcgtatttcgtttaaatcc
gacgttgaacgtcttcagcagacgcggcgtgtttaccgctctgcccaagacttgacacac
aagctggagtccattttcaggcataagcaggcatacagagtcgtctttgaaaaagatgca
attgaaatgcgcatgagattacgtgatctatgtgagcggttgatgatgcttcatcccata
gactttggaaggaaagcagaggagatcctttggtggaaagtttattacaatgtcatcacc
ctggccaagaagagcaagaagaacatccgtagcggctcatctctggaatgtgcttacagg
acacacctcctggcagctacaggattctaccatcatctcctcatgagactacagtgggag
tatggtctgcaggagaaccatgtcatggacttcatcagcttcccggatcaggatcaggtc
aaagagacatgcatggatgccaacaaaccagaggccaaggactgggcccagaaggcttgt
catcgatgtcttatctacctcggtgatctagcaaggtacaggcaggaatttgaaggtcca
agcagttgtctcctagctcaacgcttctaccaccaggcccttgtgcttaatcctgccgtg
ggcatgcctcacaaccaacttggtacactggctggaacacgttatcaggggctcgatgcg
gcctatcactacctgagatgctggttatctgacttgaggtttgatggtgctattgccaat
ttggaaaaggtatttgagagaaatcagaagaggtttcatgagttgccttcaagtcccagc
ccagatcttcctccagaattgcaaagaccacgagatatcaaacagtttctgattcgcttc
ctctacctgcaagagatgttccagcctagcaacaagacatccaccgacaccctaccgtcg
ctatgtcaggaggtgctgcagggcttccaccagtgcatgctacatggggctgttcctcac
gcaaggcaaagggatgaggagggcagagaaagctatctgtctaatgacatcatctttaaa
ctggttgtgctaacgctgatgagcacatacaggctgcagaaagcaggctccaaacagaca
tctacagctgttgttttcactctggctctgttttcatatacactcaaccatctctgtgag
aaactgaacaatgctatctacaggaagatctatccagaccagactactgccacttttaca
aaagcacaagactcagacggatcatccgatggccgagccagtccggccgacaccatcaca
cccatcctgagccgggacatcgacagcgacggcaccgtcaaaccagccaagaagaaacaa
cagaagaagaaacctaagacggtcctgaaggccatgcgacgtcggcgtaagagggccggt
ctgggagcccacaccagcgaggagtctgatctgagtgagggggagcctggagaggataat
cattctaatggtggtagctcagggggagagtccggtgaggagagggtactggctgctgag
tctgatagtgattacttcatggacagtcaggagctggagctggatgaggaagagtcttca
gagagacatagtctgcatgaggattctaagacccctccccctggctcaggcgaggagagc
ggtctctccatcatgagtgacatcacggtagaagacatctcctcccagctgatcgcccct
cctaccggccccacccacacccctcctggtaggcgtaacatccgcctagcacccagcttt
gatgcgtacaacaaggagacgatgtctgcccagtccaaggaggagggcaaggagacaagg
gagaggaagggggaatccccaacagggtctacgcagactcctccgggtagagaaaacaga
gatacaggtggatccagtgtaaccagtgcatcgaccagcccttcagatctacagaccaat
ccaatccctctaccactaatcatggagatactaacaagtgagggactcctaccggtcatt
aagatcctcactgattggctgcggacaaatgaagacttcatcatcaagactgctcagagt
tcccaacctctctgggccagactggccagtctcctcaacatgtgtcctcatgaaaagtca
cttgtaaatcaagactggtgcggtagcgttggcctgcggcagctgttagagggcagtctt
gaaagcgggaagggaaagagttggtatcagcctatgcctctgacagaagacatcgccatc
tggactatgcctcctctacagtacctacagaagaagatgaagtatggtatccatcatgag
ctggatcttactttacaagaagaggtaggtgatgccattacacccaaagctacatccatg
cttagggtttgggattatcttcacccaagtgcttctgaaatagccacatactgttcattt
ttagagacttgttttgttctatttaccgtgattagagtcctgtgccttcgtcagtttggt
tactacctgagcagtatagatgggatcagtctttcttgtgacgatgatcactttaccagt
gaaactgtagacctgtctgatgaacaagatgaagaagaactgcatcaaccagacgaggat
gatgaaccgcaaccaagtactagacctgaagagaaagaagaagacatcgatgctcgtaga
cagcaggtgatgagaggcatggcacagctaagattacagtctgaagtgagtcagcttgag
ggcagtattgaaccccttaacatggacgccctatctccctacctcatccctgatacagcc
gtcctatctaatcagctaccggtcttgagatcgttggtagccacatcacgtttcatcgtt
atcatacccaaagcagttgtgtctcaattagacatcaataagaagcatcaacccaaggct
cgagaggctatcaagttcatggagaaggaattccagattggcaacaggtatctaagagct
cagaaagataaagagaatctacgctttgatgagaattccaaggtcaagatagatgacatt
aatgtcagaaccttttgcagtatagcagaatgtgctcatttctttgccctacgctgtggt
gaccctgcattgcgtagccctgctaaccccaacccaggagggatggttaccattctcacc
catcaagaaccatcggatgatcctagggtgacgactaccatcgacaagctgctcaacgtc
ggggtcgacgtcacgacggccagggacttccaagctcggtggcaggctcatacttga
DBGET
integrated database retrieval system
