Strongylocentrotus purpuratus (purple sea urchin): 594475
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Entry
594475 CDS
T01019
Name
(RefSeq) small RNA degrading nuclease 5 isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
594475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spu03009
]
594475
Ribosome biogenesis [BR:
spu03009
]
Eukaryotic type
Pre-60S particles
RNases
594475
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-GeneID:
594475
NCBI-ProteinID:
XP_030840462
UniProt:
A0A7M7NTE7
LinkDB
All DBs
Position
Unknown
AA seq
663 aa
AA seq
DB search
MHSAHRDTSAQICKEIYIGNVRIPFRRISITHAGLTSSKMGVAENSTKPSRKRKSAAIVT
SSKQDEEEPSGKKQKKKEKTVVAQAVNREETISDAVPSPKREHKYSAEETAEWKKRKVYF
QKMKMQQPKLFLNENTPKMNGNHIANNGSSTEKSVDSPKIKVPTIFKRKDPITLTEVLYL
LQYGLLGNSASFPPSWCKLLRVGKIKKVVFIILNGVTSRIYRRKRHCFPNIASKSLSTKV
IPALSYFAMLQDVLSTVKSNTKFSLHKHRIIAAMKYEKAVKENQVEEELKLIEGKAENGI
VDGAPQPGKTHYLVSREEMESRGYPRPGDEGCVHTRIVEQVTDQSPIIGIDCEMVITTAG
TELARVSLTDDKGKMLYNSLVKPINPVRDYVTRYSGITKKLLEPVETRLADAQKAVIDVL
PRDAILVGQGLENDLRALKIYHPHCVDTSNMFTASGRRVKLKLLAKEYLNRDIQCGTAGH
DSVEDAAAAMDLFKLKLAKGDKLRTYYRECNAGPVFAARESIFEIAQEQGKKVTAVDTRF
TLKKFKKEPVSCNVCFNDKEICKKACNALSTSDFVYMQFHGYNNLTQGNTVDEADTETTL
SLMDERVGTVLDALPDNSLHVILMPGTTEMRKVKDPKRGDYKMRHGRCVIGLKLEEITYP
GNR
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgcactcagcccatcgcgacacctcagcacaaatctgtaaggagatttatattggcaac
gtcagaattccatttcgacggatttcaatcacgcatgcagggctgacatcaagtaaaatg
ggtgtagcagagaattcaaccaagccaagcaggaagcgtaaatctgctgccattgtgact
tcatccaaacaggatgaggaggaaccttcaggaaagaagcagaagaagaaagaaaaaaca
gttgttgctcaggcagtaaatcgtgaagaaaccatcagcgatgcagtgccgtctcccaaa
cgcgaacataaatactcagcagaagaaacggcagaatggaagaagaggaaagtttatttt
cagaagatgaagatgcaacaaccaaaattgtttctaaatgagaatacaccaaaaatgaat
ggtaaccacatcgcaaacaatggcagcagcacggaaaagagtgtagattcaccaaagata
aaagtgccaaccatatttaaacgaaaagatccaataacactcacagaagtcttgtatctt
ctccagtatggactgctagggaactctgcaagttttccaccaagttggtgcaagctactg
agggttggtaagatcaagaaggtcgtctttatcattctgaatggtgttaccagccgaatc
tacaggagaaagagacattgcttcccaaacatagcttctaaatccctttctaccaaagtc
attccagctctcagttactttgccatgctccaagatgttctatctaccgtgaaaagcaac
accaagttcagccttcacaagcataggataatagcagctatgaaatatgagaaagcagtc
aaggagaaccaggtcgaagaagaactgaaattgattgagggaaaggctgaaaatggcatt
gtggatggagcaccgcagccagggaagacccactacctagtcagcagggaggagatggag
agtaggggctacccccgtccgggtgacgaggggtgtgttcacaccaggattgtggagcaa
gtcactgatcagagccccatcataggcattgactgtgaaatggtgataacgactgctggt
actgagctagctagggtctctctcaccgatgacaaagggaagatgctctacaactcactg
gtcaaaccaataaaccctgtcagggattatgtgaccaggtatagcgggatcaccaagaag
ttgctggagcctgttgagacccggctggccgacgcccagaaggctgtgatagatgtccta
ccaagggatgccatcctggtaggacagggactagagaatgatctcagagctctgaagatc
tatcaccctcactgtgtggatactagtaatatgttcactgcatcgggaaggagagtcaag
ctgaaactcctagccaaggaatacctcaatcgtgatatacagtgtggtacagctggtcat
gactctgtagaagatgctgcagcagccatggatctcttcaagctcaaactagccaagggg
gataagctcagaacctactacagagaatgcaatgctggacctgtctttgcagcaagagag
agtatatttgagatagcccaggagcaggggaagaaagtaactgctgttgacacccgattc
acactcaagaaattcaagaaagagcctgtcagctgtaacgtctgcttcaatgataaagag
atctgcaagaaagcctgtaatgcactctccacctcagactttgtttacatgcaatttcat
ggttataacaatctaactcaaggcaacacggtggatgaagcagatacagagacgaccctc
tccctaatggacgaacgagtaggcacggtattggacgcccttccagacaactccttacat
gtgatccttatgcctgggactacagagatgagaaaggtcaaagatcccaagcgaggcgac
tacaagatgagacacggcagatgcgtcattggtctgaagctagaagaaatcacataccca
ggaaacagataa
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