Strongylocentrotus purpuratus (purple sea urchin): 755644
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Entry
755644 CDS
T01019
Name
(RefSeq) pre-mRNA-splicing factor SYF1 isoform X1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
755644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spu03019
]
755644
03041 Spliceosome [BR:
spu03041
]
755644
Messenger RNA biogenesis [BR:
spu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
755644
Spliceosome [BR:
spu03041
]
Complex B
Other components
Prp19-related factors
755644
Complex C
755644
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_2
ARM_TT21_C
TPR_12
TPR_8
TPR_15
ARM_TT21
NRDE-2
TPR_1
Uso1_p115_C
Motif
Other DBs
NCBI-GeneID:
755644
NCBI-ProteinID:
XP_030852951
UniProt:
A0A7M7PLR4
LinkDB
All DBs
Position
Unknown
AA seq
851 aa
AA seq
DB search
MPISGPEHSRDLIFEEDDLAYEEEILRHPFSVKCWLRYTEHKSKGPPAGLHLIYERALKE
LPGSYKLWYNYLKLRRKAIKGRCITDPGYEDVNNAFERALVFMHKMPRIWLDYCQFLMDQ
CKVARTRRTFDRALRAMPISQHHRIWPLYLKFVRSMPLQETAVRVYRRYLKLCSENAEEY
IEYLVDILRLDEGAVRLADIVNQEAFVSKEGKSNHQLWHDLCDLICKHPTKVTSLKVDPI
IRGGIKRFSDERGKLWCSLADYYIRSGHFEKARDIYEEAIFTVKTVRDFTQVFDAYAQFE
ESMLKAKMETSAESGSTEDDDIDIELRLERFEDLMDRRPLLLNSVLLRQNPHNVHEWHKR
AKLFEGKPKEVINTYTEAVQTVTPQLATGKLHTLWVEFAKFYEKHSQIMEARVIFEKGTK
VEYMKVDELAGVWCEWAEMEIRHENYDAALKLMRRATAAPGRKAAYHDKSEPVQNRLYKN
LKLWSMYADLEESFGTFKSTKAVYDRVIDLRIATPQIIINYGMFLEENQYFEEAFKAYEK
GIGLFKWPNVYDIWNTYLTKFMERYGGKKLERTRDLFEQCLEDCPPKFTKTLYLLYAKLE
EKYGLSRHAVAVYDRATKAVLPKEQHEMFNIYIKRVAEVYGVTQTRPIYEKAVEILPDIE
AREMCLRFADLERKLGEIDRARAVYAHCSQMCDPRVTATFWQVWKDFEIKHGNEDTVREM
LRIKRSIQAKFNTQVNFMSAQMIAAEGAAKPNLAAVDDMQLLEQRAQALAAEAEADKPRL
KKDILFVRGDTEAKREAVAEATRAANPAEINIDDDEDEDSEEEVDEVNVERKGVPSEVFG
SIKAVQDEEED
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgccgatatcaggacctgagcactcgagagatttgatatttgaagaggatgacttggcc
tatgaggaggagatcttacgtcatccgttctctgtcaagtgttggctgcgttataccgag
cacaaatctaaaggccccccggcaggactacatctcatctatgagagggccctcaaggaa
ttaccaggaagctacaagctctggtataactacctgaagctgagaaggaaggcgatcaag
ggccgttgcatcacggaccctggatacgaggatgtcaacaatgcctttgagagagccttg
gtcttcatgcacaagatgccccgaatctggctggactactgccagttcttgatggaccag
tgcaaggtcgcccggacgcgccggacgttcgaccgcgccctgagggccatgcccatctcc
cagcatcacaggatctggcccctctacctcaagtttgtccgctccatgccgctccaggag
acggccgtccgggtgtacaggaggtacctcaagctgtgttctgagaatgctgaggagtac
attgagtacctggttgacattttgcgcttggacgagggcgctgttcgtttggcagacatc
gtaaatcaggaggcctttgtgtccaaagagggaaaatcaaaccaccagctgtggcatgac
ctctgtgacttgatctgcaagcacccgaccaaggtcacgtcgctcaaggtcgatcccatt
atccggggagggatcaaacgcttcagcgatgagagggggaaactgtggtgctctctggct
gactactacatcaggagcggtcactttgagaaggcaagggacatctatgaagaagccatc
tttacagtgaaaactgtcagggatttcacccaggtgtttgatgcctatgctcagtttgag
gagagcatgctgaaagcaaagatggaaacctctgcggaatctggttcaacggaagatgat
gacatcgacatagagctgagactggaacggtttgaagacctgatggacagacgccctctg
ttgttgaatagtgtcctattgaggcagaatccccacaatgtccatgagtggcacaagagg
gctaaactctttgaggggaagcctaaagaagtcattaacacctacacagaggctgttcag
acggtgacccctcagctagcgacagggaagcttcacacgctgtgggtggagtttgccaag
ttttacgagaagcatagccagatcatggaggctagggtgatatttgagaaaggaaccaag
gttgagtacatgaaagtagatgaactggccggagtctggtgtgaatgggcagagatggag
ataagacacgagaactatgatgctgcactgaagctgatgcgtagggcgacggcggcaccc
ggcaggaaggctgcgtaccatgacaagagtgaacctgtccagaacagactttataagaac
ctgaagctctggtctatgtatgctgatctagaggagagctttggaactttcaagagtacc
aaggcagtgtacgatcgtgtcattgatctccgtattgccacgccccagatcatcatcaac
tatggcatgttcctggaggagaaccagtactttgaggaggcttttaaggcatatgagaag
gggatcggtctcttcaagtggccaaatgtgtatgacatctggaatacctatcttacaaag
ttcatggagagatatggaggcaagaaactggagagaaccagagacctctttgaacagtgc
cttgaagactgtcctcccaaatttaccaagactttgtacctgttgtatgccaaactcgag
gagaaatacggattatcccggcatgctgtggccgtctatgacagggctaccaaagcagtg
cttcccaaagagcaacacgagatgttcaacatttacatcaagcgagttgccgaggtgtac
ggcgtcacccagaccagacccatctatgagaaagctgtggaaattctacccgacatcgaa
gccagagagatgtgcctccggtttgctgatctggaacgcaagctgggcgagatcgacaga
gcgagggcggtctacgctcactgctcgcagatgtgtgatccacgcgtgacggcaactttc
tggcaggtgtggaaggactttgagatcaagcacggcaacgaggatacggtcagggagatg
ctgaggatcaagaggagcatccaggccaagtttaacactcaggtgaatttcatgtcagct
cagatgattgccgcagaaggagcagccaaacccaacttagctgcagtggatgacatgcag
ttactggaacagagagcacaggcacttgctgctgaggccgaggctgataaaccaagactc
aagaaagatattctctttgtcaggggtgatactgaagctaagcgggaggcggttgccgag
gcaacaagagcagccaacccagcagagatcaacattgatgatgatgaggatgaggacagt
gaagaagaagtggatgaggttaatgtggagcggaaaggtgtcccatctgaggtgtttggt
agtatcaaagctgtccaggatgaagaggaggattaa
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