Strongylocentrotus purpuratus (purple sea urchin): 757112
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Entry
757112 CDS
T01019
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit isoform X1
KO
K07466
replication factor A1
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03030
DNA replication
spu03420
Nucleotide excision repair
spu03430
Mismatch repair
spu03440
Homologous recombination
spu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
757112
03420 Nucleotide excision repair
757112
03430 Mismatch repair
757112
03440 Homologous recombination
757112
03460 Fanconi anemia pathway
757112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spu03000
]
757112
03032 DNA replication proteins [BR:
spu03032
]
757112
03400 DNA repair and recombination proteins [BR:
spu03400
]
757112
Transcription factors [BR:
spu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
757112
DNA replication proteins [BR:
spu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
757112
DNA repair and recombination proteins [BR:
spu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
757112
MMR (mismatch excision repair)
757112
DSBR (double strand breaks repair)
HR (homologous recombination)
757112
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CDC24_OB3
HROB
EGF_CA
Motif
Other DBs
NCBI-GeneID:
757112
NCBI-ProteinID:
XP_030847891
UniProt:
A0A7M7P923
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MNNLLSRGAIAAIFRGENVSCPVLQLLACKKMNAAASGKAVDRYRLMLSDGEHTCTAMLA
TQLNEMVSTGELDVKAAMKLKNYSCNPIANDRRVIVVLDLDIVKKGSEIGVSIGDPTPMR
APGQGGGPAPAQQQSRPDSTVSHDPPQTARPTSYGTGAAPASATPNKQGTFYGQSNSAMG
GSTTSPKKVQPISSLTPYQNRWTIKARVTNKTAIRTWSNARGEGKLFSMDLLDQSGEIRC
TAFKDMVDKYYEMIEIGKVYFVSRGTLKPANRQYTSINNDYELTFNNDTMVEPCVEEDVS
IPAVQFDFKSISHLEDTPEDSMIDVIGVCKSTSDLTAVTIKSSNREVNKRSLQLVDDSQK
EVSLTLWGKEAEDFDGSGNPVIAVKGARLSGFGGRSLSVLQNSIFQVNPDIPKAHHLKGW
FDSEGHSQDSQSISTRQGSGGGGGANTNWMTFHDVHAQNLGQGEKPDYFTVKGTILFVRK
ENCMYMACPSAECNKKVSENGDGSYRCEKCSKDYENFKYRLLLSANVADSTDNQWATCFQ
ETAEQLLLKSAQELGSLKDQGEATEKEFNQVFQDACFIDYMFRMRIKMETYNEEARLKCT
CVSAQPINVRDYTNKLIKDIRLMASA
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaataatttgctttccagaggggccattgcggccattttcagaggagaaaatgtcagt
tgccctgtgttacagcttttggcatgtaagaagatgaatgctgccgccagtggcaaagct
gtggatcgttacaggcttatgctttcagatggagaacacacatgcacagctatgttggct
acacaactcaacgagatggtttccactggagagctagatgtcaaagccgccatgaaactc
aagaactactcctgtaatccaatagccaacgacaggcgagtcattgtcgttttagacctg
gatattgtgaagaagggaagtgagattggtgtgtcaatcggtgaccctacaccaatgaga
gctccggggcagggaggaggacctgcgccagcacagcagcagtctagaccggatagtaca
gtgagccatgatccacctcagactgcgagacccaccagctatggtacaggagcagccccg
gctagcgcaacgcccaacaaacaagggacattctacggtcaatcaaactcggccatgggt
ggtagtaccacgtcacccaagaaggtccagcccatctccagtctaaccccataccaaaat
agatggaccatcaaggctcgtgtgaccaacaagacggccatccgtacctggagcaatgcc
cgtggtgagggtaagctcttctccatggatctcctagatcagtccggtgagatccgctgt
actgccttcaaggacatggtggataaatactatgagatgatagagattggaaaggtctac
ttcgtatctcgaggcaccctgaagcccgccaatcgtcagtacacctccatcaataatgac
tatgagcttaccttcaacaatgatacgatggtagagccctgtgtggaggaagatgtgtcc
attccagctgttcagtttgacttcaagagcatctctcatcttgaggacacgcccgaggat
tccatgatagatgtgattggagtgtgtaagagtacgagtgacctgacagcagtgaccatc
aagtcgtctaatcgagaggtcaacaagaggtcattacagctggtcgatgattctcagaag
gaggtttctctgaccctgtggggcaaggaggctgaggactttgatggttcaggaaacccc
gtgatcgctgtgaagggagctcgtctgtctggcttcggaggaagatctctgtcggtcctg
cagaatagtattttccaggtcaatcctgacatccccaaagcacatcatctcaaaggatgg
tttgacagcgagggtcactcccaggattcccagtccatctccactagacagggatcagga
ggcggaggaggagctaacacaaactggatgacattccatgatgtacatgcacagaaccta
ggccaaggtgaaaagcctgattatttcacagtgaagggcaccatactgtttgtccggaag
gagaactgcatgtacatggcctgtccgtcggctgagtgtaacaagaaggtctctgagaac
ggagatgggtcgtacagatgtgagaagtgttccaaagactatgaaaatttcaagtataga
ctcctgctttctgctaatgttgcagactccacagacaaccaatgggcgacctgctttcag
gagacagcagaacagctccttttaaaatcagcacaggaactgggtagtctcaaagatcag
ggtgaggcgacagaaaaggaatttaatcaggtcttccaagatgcttgcttcattgattac
atgttcaggatgaggatcaagatggaaacttataatgaggaagcccgtctgaagtgcacc
tgcgtcagcgctcaacccattaacgtgcgggattacaccaacaaactgatcaaagatatc
agactcatggcctctgcttag
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integrated database retrieval system
