Strongylocentrotus purpuratus (purple sea urchin): 762470
Help
Entry
762470 CDS
T01019
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spu03041
]
762470
Spliceosome [BR:
spu03041
]
Common components
Common spliceosomal components
General mRNP proteins
762470
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RBD_DEAH11
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
762470
NCBI-ProteinID:
XP_001198098
UniProt:
A0A7M7G095
LinkDB
All DBs
Position
Unknown
AA seq
689 aa
AA seq
DB search
MIYIPGVISRSDLDVVVSGNKYKMTEDLDVEAMLEAPYMYKKEEAAPENGDKAKEVVVPE
EEAPAPKKKEERRRSRSRSKGRKRSRSKSRERHRDRKDRDKGRDKDRERGRDSHRDRERD
RGDRDHDRDRGDRRDRDGDRKDRDGDRKDRDRERERRRSPVRRRSRSRERYGGYRGGDRR
GGGGGYRGGRGYRDREEDNYRSKRSRSKERNKDKEISPVRDDPDADTRDARTVFVMQLSQ
RAKERELKEFFSSVGKVRTVKIITDRNSRRSKGVGYVEYDVADSVPLALGLNNQKLLGVP
IIVQPSHAEKNRSAGQNVTLQKVNSGPMRLYVGSLHYNITEAMLRGIFEPFGKIDNIQLM
MDTDANRSKGYGFITFHDAEDAKRALDQLNGFELAGRPMKVNHVTERNEQGQQAPSFLDS
EELDKRGITLNTTGRLQLMAKLAEGTGFQIPAAAAEALHPLSQVPGLGLPGLQGLQIIPN
QPITLPPATMNLQESLQAAQLQAHHSAQALAAATASAAQTNLALGMGSIPDVLSGIPPLG
PGLLPEPPQVQPQQVAQAPVAQAPAPAAAGPGPTGAGSTACFMLSNMFDPQAETMLGWET
DIRDDVIEECNKHGGVLHIHVDKASPQGNVYVKCPTAQIAMAALNNLHNRWFAGKMITAA
YMPVANYHAIFPQAASATMLLQPSTPRRV
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgatatacatacccggtgtaatatcgaggtcagatcttgacgtggtagtgagcggaaat
aaatacaaaatgacagaggatttggacgttgaggccatgttggaggcaccttacatgtac
aaaaaagaggaagctgcccctgagaatggtgacaaagctaaagaagtagtagtgccagag
gaggaggctccagcaccaaagaaaaaggaagaaaggagaagaagtcgcagcaggagcaaa
ggcaggaaacgaagccgtagcaagagcagagaaagacacagggatcgcaaggaccgagac
aaaggccgagacaaggatcgtgagaggggcagggacagccacagggatcgagagcgggat
agaggggatagagatcatgacagggaccgaggagacaggagggatcgggatggagacagg
aaggatcgagatggagacagaaaggatcgtgatagagagagggagagaagacgcagccca
gtgaggaggaggagccggagcagggaacgttatggaggatacaggggaggtgaccgaagg
ggaggaggaggaggctataggggtggacgagggtatagagacagggaggaagataactac
aggtcaaagaggtcacgcagcaaagaacgcaacaaggacaaggaaatcagccctgtgcga
gatgatcctgatgcagacacccgagatgcaagaacagtctttgtgatgcagctctcacag
agagcaaaggaaagggaactcaaagaattcttctcatcagttggaaaggtgagaactgta
aaaatcatcacagatcgtaactcgaggagatcgaaaggagttggttatgtggagtatgat
gttgcagattcagtaccactggctctaggattgaacaatcagaagctgttaggtgtgcct
atcatagtacagccgtcccatgcagagaagaaccgttccgctggtcagaatgtgactcta
cagaaagtcaactcaggtcctatgaggctctacgtaggatctctacattataacatcaca
gaagccatgcttagaggcatctttgaaccatttggaaagattgacaatattcagttgatg
atggatacagatgccaaccgatccaaaggatatggatttattactttccatgatgctgag
gatgcgaagagagctttagatcagctgaatggttttgagttagctggaagaccaatgaaa
gtcaaccatgtaacagagaggaatgaacaaggtcaacaagctccatcattcctggatagc
gaagagttagataagagaggtattacactcaataccactggaagattgcaactcatggcc
aaactagctgaaggtactggtttccagatcccagcagcagcagcagaggcgttacatcca
ttgagtcaggtaccaggactaggtctaccaggtctacaaggtctccagatcattcccaat
cagcccatcaccttaccaccagctactatgaacctacaggaatcattacaagctgctcag
ttacaagctcatcacagtgcacaggctctagcagcagctacagcatccgctgcacagact
aacttggcgcttggaatgggatccattccagacgtgttatcaggtataccacctctagga
cctggtctattacctgaacccccacaagtacaaccacagcaggtagcacaagcacctgta
gcccaggccccagcaccagctgcagcaggacctggacctactggagctggatctacagct
tgcttcatgctctctaacatgtttgatcctcaagcagagacaatgttaggttgggagacg
gatatcagagacgacgtgattgaggaatgtaacaaacacggaggagttcttcacatacat
gtagataaagcatcaccacaaggcaatgtctatgtcaagtgcccgactgcacagatagct
atggctgccctcaataaccttcacaacagatggtttgcaggtaaaatgatcactgcagcc
tacatgcctgtcgctaactaccatgccatctttcctcaagctgcatcagctacaatgctt
cttcagccaagcacacccagaagagtataa
DBGET
integrated database retrieval system
