Strongylocentrotus purpuratus (purple sea urchin): 763660
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Entry
763660 CDS
T01019
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
763660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spu03041
]
763660
Enzymes [BR:
spu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
763660
Spliceosome [BR:
spu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
763660
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
WHD_HA2
HA2_C
DEAD
AAA_22
AAA_19
AAA_30
nSTAND_NTPase5
nSTAND3
Flavi_DEAD
SRP54
TsaE
Motif
Other DBs
NCBI-GeneID:
763660
NCBI-ProteinID:
XP_030853549
UniProt:
A0A7M7PMQ6
LinkDB
All DBs
Position
Unknown
AA seq
1040 aa
AA seq
DB search
MASGSLDQWVKDELYDVLGISDRYIAEFLVGLAKRATSSSDLVERIKETGTIDISNSVVS
FAGELYNKIPRKQQAVNPNRLKEKQAVEQELKNRSYQLLSDDEEEEEQLVRMVREKRQKT
TKREHIRKQKKESSDDDSEPEPKRQAIKEESSSESDSTEDEEKERRRDLEERDAFAARLR
NKDKERTKKKSNKSSKKDLAEAKRRLEEAEEDRKKTVPDIRKESRQKYLKMRREDKLKEL
EADIHDDEYLFAQESLTERERKEMKYKKTVLDLAKEHKRAGEKEREGRYYMPRDDEKQSE
RYVEPVGEEGAGNYEQKRWEDEHVRKGEMHFGAKDAKQRHKQKEYDLVVDDFEEIEFVAA
FTAPGTMKESDDDEDDDAPKKMSASEKKKQSIQEVRKSLPIYPFRDDLISAIRDHQVLII
EGETGSGKTTQITQYLHEAGFTKKGMKIGCTQPRRVAAMSVAARVAEEMGVKLGNEVGYS
IRFEDCTSDRTIIKYMTDGMLLREFLGEPDLASYRVLIVDEAHERTLHTDILFGLVKDIS
RFRPDLKLLISSATLDTEKFAAFFDDAPIFRIPGRRYPVDILYTKAPEADFLDACTISVL
QIHLTQPDGDCLVFLTGQEEIETCMEMLQERVKKLGNRVKELLVLPIYSTLPSDLQARIF
EPTPPGARKVILATNIAETSLTIDGIIYVIDPGFCKQKSYNARTGMESLVVTPISKASAN
QRAGRAGRVAAGKCFRLYTAWAFKNELEENTIPEIQRTNLGNVVLLLKSLGINDLIHFDF
MDPPPHETLVLALEQLYALGALNHKGELTKMGRRMAEFPVDPMLAKMILASEKYKCSEEI
LSITAMLSVNNSVFYRPKDKIVHADNARVNFFTPGGDHLTLLNVYNQWVETGFSTQWCFE
NFIQHRSMRRARDVRDQLQGLMERVEMEIVSCGMDSVVIRKAVTAGFFYHTARFSKGGNY
KTVKHQQTVMVHPNSGLFEEQPRWLIYHELVFTTKEFMRQVIEIENGWLLEAAPHYYKAK
ELEDASSKKMPKGVGKSAGS
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggcatctggcagtcttgaccagtgggtcaaggatgagctctatgatgtccttgggatc
agtgatcggtacatagcagagttcctcgtcggactcgccaagagggcaacaagtagttca
gacctggtagagagaattaaggagactgggaccattgatatctcaaatagcgtggtcagc
ttcgctggagagctctacaacaagatccctagaaagcagcaagctgttaatcccaataga
ttgaaggagaagcaagcagttgaacaagaactgaagaacagatcttaccagctcctctcg
gacgatgaagaagaagaagagcaactcgtcaggatggtcagagaaaagagacagaagact
acaaagcgagagcacatcaggaaacagaagaaagaaagtagcgatgatgatagcgagcca
gagcccaagagacaagctataaaggaggagtcaagctcagaatcggacagtacggaggat
gaagagaaggagaggagaagagatcttgaagagagggatgctttcgctgccagactgaga
aacaaggataaggaacgaacaaagaagaaaagtaacaagagcagcaagaaggacctagct
gaggccaagagaaggctggaggaggcagaagaggaccggaagaagacggttccagacata
aggaaggaatctcgtcagaagtacctcaagatgaggagagaggataaactcaaggagtta
gaagccgatatccatgacgatgaatacctctttgctcaggaaagtttaacagagcgtgag
agaaaagagatgaagtataagaagacagtgctggacttggccaaggagcataagagagct
ggagagaaagaaagagaaggaagatattatatgccaagagatgatgagaaacaatctgag
aggtacgtggagcccgtcggggaagaaggcgcaggtaactatgagcagaagcgatgggag
gatgagcatgttcgtaaaggagagatgcactttggagctaaggatgctaaacagaggcac
aagcaaaaggaatatgaccttgtggtagatgactttgaggagattgagtttgtcgcagcc
ttcactgccccagggaccatgaaagagagtgacgacgatgaagacgacgatgcgcctaaa
aagatgtcggcctcggagaagaagaagcagtccatccaggaggtgaggaagagcctgccc
atctatccgttccgtgacgatctcatctctgcgatcagggaccatcaggtcttgatcatc
gagggtgaaacagggtcaggaaagacaacacagatcacgcagtacctgcatgaggctggt
tttaccaagaaaggaatgaagattggttgcacccagcccaggagggtcgcagccatgagt
gtagctgcaagagtagcggaagagatgggcgtcaaactcggcaatgaggttggatacagt
atcaggtttgaagactgcacgtcagaccgtaccatcatcaagtacatgacggacggtatg
cttctcagggagttccttggtgaacccgatcttgctagctacagagtactgattgttgat
gaagctcacgagaggactctccacaccgacattctctttggtctggtcaaagacatctct
agattcagaccggacctcaagctgctcatctccagtgctactctagacacagagaaattt
gctgcattctttgatgatgctcctatcttcaggatacctggtaggcgttaccctgtggat
atcttatataccaaggcacccgaagctgatttcttggatgcttgcacgatctcggtgctt
cagatccatctgacccagcctgatggcgattgtctggtcttcttgaccggtcaggaggaa
attgagacgtgcatggaaatgctacaggagagggtcaagaaacttggcaaccgggtgaag
gagctcctggtcctgcccatctactccaccctcccctccgacctccaggcccgcatcttc
gagcccactcctccaggagcacgcaaggtcatcctggctaccaacatcgccgagacctcc
ctgacgatagacggcatcatctacgtgatcgatccggggttctgtaagcagaagagctac
aatgcacggacgggcatggaatccttggtggtcactccaatctcaaaggcatcagccaat
cagagagcaggacgagctgggcgtgtggccgcaggaaagtgtttccgtctctacacagca
tgggccttcaagaatgaactagaggagaatactataccagagatccagaggaccaacctc
ggcaatgtggtcctgctactcaagagcctgggaatcaacgatctgatccactttgacttc
atggacccgccccctcacgagaccctggtcctggccttggagcagctctatgccctgggg
gccctcaaccacaagggggagctcaccaagatgggccgcaggatggccgagttccccgtc
gatcccatgctggccaagatgatcctagcctcagagaagtacaagtgttcagaagagatt
ctcagcatcaccgccatgctgtcggtcaacaattccgtcttctaccggcctaaagacaag
atagtccacgccgacaacgctagggtgaacttcttcactccgggaggtgatcatctcaca
ctgctcaacgtctacaaccagtgggtagagactggtttctcaactcagtggtgctttgag
aacttcatccagcatcgatcgatgagacgggcgcgggatgttcgtgatcagctccaggga
ctcatggagagagttgagatggagattgtgagctgtggtatggatagcgttgttattaga
aaggctgtaactgctggtttcttctaccatactgcacgcttcagtaagggaggtaactac
aagacagtcaagcaccagcagacagtcatggttcatcccaatagcggtctctttgaagaa
caaccaagatggctcatctaccatgaacttgtctttacaaccaaggagtttatgagacag
gtgatagagatagagaacggttggttgctagaggctgctccacactactacaaggccaag
gaactagaggacgcatcaagcaagaagatgcctaagggtgtcggcaagtcggccggtagc
tga
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integrated database retrieval system
