Strongylocentrotus purpuratus (purple sea urchin): 763695
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Entry
763695 CDS
T01019
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5-like
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
763695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spu03019
]
763695
Messenger RNA biogenesis [BR:
spu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
763695
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
763695
NCBI-ProteinID:
XP_030840757
UniProt:
A0A7M7SYI7
LinkDB
All DBs
Position
Unknown
AA seq
227 aa
AA seq
DB search
MATTPRERSSAGWPRGRSVSDSSNHKSTAGVHRERTAILYPLTNYTFGTKEPLYEKDSSV
PARFQRMKDEFQKMGTRRSVEGVLIVHEHDLPHVLLLQLGTTFFKLPGGELKAGEDEMDG
LKRLMTEILGRQDGVQQDWMVEDIIANWYRPNFEPPQYPYIPAHITKPKEHKKLYFVQLA
EKALFAVPRNYKLVAAPLFELYDNSPGYGPVISSLPQLLSRFNFIYQ
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atggctactaccccgcgtgaacgaagttctgctggctggcccagaggaaggtctgtttca
gactctagcaatcacaaaagtacagctggtgtgcatcgtgaaaggacagcaatattatat
cctttgacaaactacacatttggcaccaaagagcccctgtatgagaaagattccagtgta
ccagccaggttccaacggatgaaagatgaattccagaagatgggcacaaggcggtctgta
gagggagtcctcatcgttcatgaacatgatcttcctcatgttttattgctgcagttgggc
acaacattcttcaaattgcctggtggagaactcaaagctggagaagacgagatggacggt
ctcaagagactcatgacagaaattcttggaagacaagatggtgtccagcaagactggatg
gtagaagatatcattgcaaactggtacagacctaactttgaacctcctcagtatccttac
attccagctcatataacaaagccaaaggaacataaaaaactgtactttgtacaactagcg
gaaaaggccctatttgctgttccaaggaattacaagctggtagctgcgcctctctttgaa
ctctacgacaattcaccaggatatggccctgtcatatccagcttaccgcagctacttagc
agattcaacttcatttaccagtaa
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