Strongylocentrotus purpuratus (purple sea urchin): 764228
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Entry
764228 CDS
T01019
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03030
DNA replication
spu03410
Base excision repair
spu03420
Nucleotide excision repair
spu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
764228
03410 Base excision repair
764228
03420 Nucleotide excision repair
764228
03430 Mismatch repair
764228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spu03032
]
764228
03036 Chromosome and associated proteins [BR:
spu03036
]
764228
03400 DNA repair and recombination proteins [BR:
spu03400
]
764228
DNA replication proteins [BR:
spu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
764228
DNA Replication Termination Factors
ELG1-RFC complex
764228
Chromosome and associated proteins [BR:
spu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
764228
DNA repair and recombination proteins [BR:
spu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
764228
Check point factors
HRAD17(Rad24)-RFC complex
764228
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_11
RuvB_N
AAA_22
AAA_24
ResIII
AAA_14
AAA_16
AAA_assoc_2
DUF815
AAA_30
RCF1-5-like_lid
DEAD
TIP49
AAA_7
AAA_5
nSTAND3
AAA_19
PhoH
bpMoxR
Thioredoxin_6
Mg_chelatase
ATPase_2
AAA_28
BrkDBD
DUF3802
AAA_29
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
764228
NCBI-ProteinID:
XP_030831515
LinkDB
All DBs
Position
Unknown
AA seq
328 aa
AA seq
DB search
MSRANEHKNLPWVEKYRPNSLDDLISHTEIINTIQKFIKQDRLPHLLFYGPPGTGKTSTI
LAVAKQLYAPKEFNSMVLELNASDDRGIGIVRGSILNFASTRTIFKSGFKLVILDEADAM
TNDAQNALRRVIEKFTENTRFCFICNYLSKIIPALQSRCTRFRFGPLDNQQIVPRLEFVV
REENVDMTEDGKKALITLAKGDMRRVINILQSTSMAHEKVTEENVYLCTGHPLRTDIENI
VNWMLNEDFTAAFNHINQLKTLKGLALLDILLEVHTYVHRIEFPQKVRIYLLDKMSDIEY
RLAAGTSEKLQLGSLVAAFQSAREMVAA
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtgcaaatgaacacaagaatttaccatgggtggagaagtatcgacccaactcg
ctagacgaccttatctcacatacagaaatcatcaacaccattcagaagttcatcaagcaa
gatcgcctgccccacctactcttctatggacccccaggaacggggaaaacatccaccatc
ttggcagttgctaagcaactgtacgctcccaaggagttcaactcgatggtcttggagctc
aatgcgtcagatgaccgaggtatcggcattgtcagaggtagcatcttgaactttgccagc
accaggaccatcttcaaatcgggcttcaagctggtcatcttggatgaagccgacgccatg
accaacgatgcacagaatgcactcaggagagtcattgagaagttcacagagaacacccgg
ttctgcttcatctgtaactacctgtccaagatcatccctgccctccagtccaggtgcacc
cgcttccgattcggtccccttgacaaccagcagattgtacccaggctggagtttgtcgtc
agggaagaaaatgttgacatgacggaggatggtaagaaggctctcatcacgttggccaaa
ggagacatgagaagagtcatcaacatcttacagagcacatccatggcacatgagaaagta
acggaagagaatgtttacctgtgtaccggccaccctctcaggacagacatcgagaacatc
gtcaactggatgctgaatgaagactttactgccgctttcaaccacatcaaccagctgaag
acactcaaaggtctcgcccttctagatatcctgttagaagtccatacttatgtacacaga
attgaatttccacagaaggttcggatatacctcttggacaagatgtcagatattgagtac
cgcctggcagcagggaccagcgaaaagctacagcttgggtctttggtagcagccttccag
agcgcacgagagatggtggctgcatag
DBGET
integrated database retrieval system
