Strongylocentrotus purpuratus (purple sea urchin): 764301
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Entry
764301 CDS
T01019
Name
(RefSeq) LOW QUALITY PROTEIN: DIS3-like exonuclease 1
KO
K18681
DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
764301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spu03019
]
764301
Messenger RNA biogenesis [BR:
spu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
764301
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
CSD2
Rrp44_CSD1
Rrp44_S1
OB_HELZ2
EGF2_RECK
Motif
Other DBs
NCBI-GeneID:
764301
NCBI-ProteinID:
XP_030832821
UniProt:
A0A7M7SUQ5
LinkDB
All DBs
Position
Unknown
AA seq
1045 aa
AA seq
DB search
MLKIEKVIQLKTKQGKPLRVVREQYLRDDVPCNSELCPKSCSMSERCVGRNVSHYVIPDG
GTARDYLDILELEEFRGLIVLQTVLHFVQHNGSRRLLNRLKGKVKDKKQGCAFFADEFCR
GAFSPRQHGESEEEWQTRLVYASAVWYYNHLEERIAIVVLTDNQQAIERYGNQTMNVHVC
AVGNYLSLFWPDLTQAQDILESVKASLAAAEEEEEDGSKEYRDHLTSDDLGSGIKTGRYM
DGMLRVNKHHAQEEAYLQRKGSGLGSKDTELECDILISGTKNRNRAVHGDIVVVELLPKA
QWTGKKLVLKSGDDREAEDVSDAVPCGRVVGILERNWRDYVATFPEKDETGASRGSKILV
IPWDYRIPKIRVSTRQADALNDQRIVVRLDNWPADSQYPNGHYVRSLGPIGQLETEVAAT
LIENSLPVGPFSEGQIKEMPVNTXGQPWLMTDEEIGKRKDLRNSHLIFSIDPKGCEDVDD
TLSVRELGNGNIELGVHIADVSYFVKEGSLTDLEARLRSTTVYLADRRYDMLPEILSADL
CSLIGGVDRYAVSVLWELKPFTFEVIKDKVWYGRTIIRSAYKMFYEAAQMLHDGKTLSAD
DIPELRDVDDMTKELELQRLKWAVDQLMMIARRLKAQREVGGAVQLEGTEVKVELNEEQE
IENLVPKQTMEIHETIAECMIYANHWVAKKIAQSYPQAALLRHHPLPRQEQFQDLITSAR
SKGFHVDTSTNKKLAESLDGCIDRRDPVFNKILRSLATKAMSNALYFSTGSLSVDQFFHY
GLAMDRYTHFTSPIRRYADIIVHRLLLAAVEEEREAEIGLLSNQNLQELCRHLNKKHRAA
QTAQKDSQELFQAMFFQDRDAQDEACIVDAVIQNLRNNGILAYIPRYGIKGAVYLRDKAG
LVCDTSIPHQPQWVQGSLSRSEFAITVQGGGHVSTYQLFDHITVGIRVQSSRAHPHSLRL
ELLASEPHNAGLQTDGLGSTLRTNIVQEVKSLSDESPFSSITLQDQIKVLGSSLPVLHRQ
YGQTDGSFYTMFQDFSHMNLKEKDS
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagatagagaaagttattcagttgaagaccaagcaagggaaaccattgcgagta
gtgcgtgaacaatatctgagagatgatgtaccatgcaacagtgaattgtgtccaaagagc
tgttcaatgtctgaaaggtgtgttggtagaaatgtatctcactatgtgattcctgatgga
ggaactgctcgagactacctggatatcctggagctagaagaattcagaggtctcatagtc
cttcaaacagtcctgcattttgtgcagcataatggaagcagacgtctacttaaccgactt
aaaggcaaagtgaaagacaagaaacaaggctgtgccttctttgctgatgaattctgtaga
ggggctttctctccaagacagcatggagagagtgaagaagagtggcaaactagattggtg
tatgcttcagcagtctggtattataatcatttagaagaaaggattgccatcgttgtgctg
actgataatcaacaggcgattgagaggtatgggaatcagaccatgaatgtacatgtctgt
gcagtggggaactatctatccttgttctggccagaccttactcaagctcaggacattctg
gaatcagtgaaagcatctcttgcagcagctgaagaagaagaagaagatggaagtaaagag
tatagagaccacctaacaagtgatgatttgggttctggaatcaagacgggaagatacatg
gatgggatgctacgggttaacaaacatcatgctcaagaagaggcttacttacagagaaaa
ggttcgggccttggatcaaaagatactgagttagaatgtgacattttgatatccggaact
aaaaacagaaatcgagcagtgcatggagacatagtggtggttgaattgcttccaaaggct
caatggactggcaagaaactggtcttaaaatctggagatgatagagaggcggaggacgtg
agcgatgcggttccatgtggtagagtggttggtatcttagagagaaactggagggattat
gtagctacattcccagagaaagatgagacaggagcaagtcgaggaagtaagattctcgtc
atcccatgggattatagaatccctaagataagggttagtaccagacaagcagatgcactc
aatgatcaaaggattgttgttcgacttgacaactggcctgcagactcccagtatcctaat
ggtcactatgtgcggtcactcggtcctattggtcaactggagacagaagtggcagctacc
ttgattgaaaacagcttaccagtgggtcctttctctgaaggacagattaaagaaatgcct
gttaataccntgggacaaccctggctaatgactgacgaggagattggtaaacggaaagac
ctgcgcaactcacaccttatcttcagtattgaccccaaaggctgtgaggatgtggatgat
actttatctgtgagggagcttggcaatggaaacatagagcttggtgtgcacatagcagat
gtatcctactttgttaaggaaggctctctcacagatcttgaagcaagattaagatcaacc
acggtatatctagcggacagacgctatgacatgcttcccgagattcttagtgctgatctc
tgctctctgattggtggagttgatcgctatgctgtcagtgtgctgtgggagttgaaacca
ttcacatttgaagtgatcaaggataaagtttggtatgggagaaccattatccgctcagct
tacaagatgttctatgaggctgctcaaatgctgcatgatgggaagacattgtcagcagac
gacatccctgaactgagagatgtagatgatatgaccaaggaactagagctgcagaggttg
aagtgggccgtggatcagctgatgatgattgctaggcggctcaaggcacagcgggaggtt
gggggcgctgttcagctagaagggacagaggttaaagttgaactcaacgaagagcaagag
attgaaaaccttgtaccaaagcagactatggagatacatgagaccatagctgaatgcatg
atctatgccaaccattgggtagctaagaagatagctcagtcttaccctcaagctgctctg
ctgagacaccatccacttccgaggcaagaacagttccaggatctgataaccagcgccagg
tccaagggatttcatgtagataccagtacaaacaagaaacttgccgagtcacttgatgga
tgtatagatagaagagacccagtgtttaacaaaatccttcgttccttagcaaccaaggcc
atgtctaatgctctctacttctcaactggtagtctgtctgtcgatcagttctttcactat
ggtctggcaatggacaggtacacccattttacatctccaatacgcagatatgctgatatt
attgtgcatcgtctgttgcttgcagctgttgaagaggaacgagaagcagaaattgggtta
ctaagcaaccagaatctgcaggaactctgtcgacacctgaacaagaaacatagagctgca
cagactgcccagaaagactcacaggaactgtttcaggccatgttttttcaggatcgagac
gcacaggatgaagcatgtatcgttgatgctgtcattcagaacctgaggaataatggcatc
ctggcttatattccaaggtatggtattaagggagcagtttaccttcgagacaaagctgga
ctagtttgcgatacatccatcccacatcaaccgcaatgggtacaaggttctctctcaaga
tcagagtttgctatcactgtgcagggagggggacacgtatccacataccaactctttgac
cacatcacggttggtatacgagttcaaagctccagagctcacccacattcactcagattg
gagctactagcatcagagcctcataatgctggcctgcagactgatggactaggcagcaca
ctcaggactaacattgtacaggaggtgaagtcgctgagtgatgagagcccgttttcatcg
ataaccctgcaggaccaaatcaaagtcttaggatccagccttcctgtactacacagacag
tatggacagactgatggaagcttctacaccatgtttcaagacttctctcatatgaactta
aaagagaaagattcatga
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