Strongylocentrotus purpuratus (purple sea urchin): 765046
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Entry
765046 CDS
T01019
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
765046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spu03021
]
765046
03019 Messenger RNA biogenesis [BR:
spu03019
]
765046
Transcription machinery [BR:
spu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
765046
Messenger RNA biogenesis [BR:
spu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
765046
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCHC
zf-CCCH_2
zf-CCCH_4
zf-CCCH_3
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
765046
NCBI-ProteinID:
XP_030839982
UniProt:
A0A7M7NSC2
LinkDB
All DBs
Position
Unknown
AA seq
322 aa
AA seq
DB search
MQAIVANVENVHFEVEMQINMQLGTLPLPFSGMDKSNSAVCQYYKNHSCIKAALCPFRHV
KGDKAVVCKHWLRGLCKKGDECEFLHQFDMTKMPECFFFAKFGMCSNKDCPFLHIDPDTK
RKDCPWYDRGFCKHGPHCKNRHVRRVYCPNYLLGFCPDGANCKYVHPTFDLPMPGDMKEI
GQKKVWNCHSCGEPGHKAINCPKKNPVQPYNTAAPPMSFSQKQAAERQQQGIRVLGNSDI
NSQSTQQNKETNAPFQPRHGGRGGHQGGQRTYDHITCYKCGEKGHFANHCPKGHLAFLSN
ALPGNQSAAPPPPQQQQQQHPQ
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgcaggctattgtagctaacgttgaaaatgtacattttgaggtggagatgcagattaac
atgcagcttgggaccttaccacttcccttttctggcatggacaagtccaactctgcagta
tgccagtactacaagaatcattcttgtataaaagcagctctgtgtccgttcagacatgtc
aagggagacaaggccgtcgtgtgcaagcattggctgagaggcttgtgcaagaaaggcgac
gagtgtgaatttctccaccagtttgacatgacgaagatgcctgagtgtttcttttttgcc
aaattcggtatgtgcagcaacaaagattgtccattccttcacattgatcctgatacaaag
aggaaggattgtccttggtatgacaggggcttctgtaaacatggtcctcattgtaagaat
cgccatgtgagaagagtttactgtcctaactacctccttggtttctgtcccgatggtgcg
aactgcaaatatgtacatccaaccttcgacctaccaatgcccggtgatatgaaggaaata
ggtcagaagaaggtatggaactgtcacagttgcggtgagccaggtcataaagctattaat
tgtcccaagaagaaccctgtccagccctataataccgctgcaccaccgatgtccttcagc
cagaaacaagctgcagaaaggcagcaacaagggatccgtgttctaggtaactctgacatc
aactctcaatccactcaacagaacaaagagacaaatgcaccatttcaaccgaggcacgga
ggtcgaggaggtcatcaaggaggtcaaaggacgtatgaccacatcacttgctataagtgt
ggagagaagggtcattttgccaaccattgcccgaagggtcatttagcattcctgagcaat
gcattaccaggtaaccagagcgcagcaccaccaccaccacaacaacaacaacaacaacat
cctcagtga
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