Sinomonas puerhi: AB5L97_08100
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Entry
AB5L97_08100 CDS
T10941
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
spue Sinomonas puerhi
Pathway
spue03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spue00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AB5L97_08100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spue03400
]
AB5L97_08100
Enzymes [BR:
spue01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AB5L97_08100
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AB5L97_08100
DNA repair and recombination proteins [BR:
spue03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AB5L97_08100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
NFACT_N
DUF5795
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
XDP46935
UniProt:
A0AB39L7W6
LinkDB
All DBs
Position
complement(1780281..1781201)
Genome browser
AA seq
306 aa
AA seq
DB search
MPELPEVTALAAYLDARLAGARIMSVQIGAINALKTADPPYTALVGRQVEGVGRRGKYIV
LLTGTPEGTEEGTARGEADDGGPLAVVVHLSLGGWVRVLDHLPEPKVPRGRGYIAARFGL
VRNGEESGIELTEAGTWKRLAVHIVRRLEDVPGIADLGPEPLEDSFTLEAFRKVLAHKKQ
IKGLLRDQKLIAGIGNAYSDEILHAAKISPFAIASTLDSTTAERLYEAMRTVLADAVAHA
MGLPADELKDEKRATMRVHRRAGEPCPVCGDTILEVSFADSALQYCPTCQTGGKPLADRR
TSKFLK
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactccccgaggtgacagccttggccgcatatctcgatgcgcggctggcgggg
gcccgcatcatgtccgtccagatcggtgcgatcaacgcgctcaagacggccgacccgccc
tacaccgcactggtcggacggcaggtcgagggcgtgggccgccgcggcaagtacatcgtc
ctcctgactggcacgccggaaggcacggaggaaggcacggcgcgaggcgaggccgacgac
ggcggcccgctcgccgtcgtcgtgcatctctcactgggcgggtgggtgcgcgtgctcgac
catctgcccgagccgaaggtgccgcgcgggcggggctacatcgcggcccggttcgggttg
gtgcgcaacggcgaggagagcggcatcgagctcacggaggccggcacgtggaagcggctc
gcggtgcacattgtgaggcggctcgaggacgttccgggcatcgccgacctcggccccgag
cctcttgaggactcgttcacgctcgaggcgttccggaaggtgctggcacacaagaagcag
atcaaggggctcctcagggaccagaagctcatcgccgggatcggcaacgcctacagcgac
gaaatcctccacgccgcgaagatctcgcccttcgcgatcgcgtcgacgcttgacagcacc
acagctgagaggctctacgaggcgatgcgaaccgtgctcgcggacgccgtggcccacgcg
atgggcctgcccgcggacgagctcaaggacgagaagcgggccacgatgcgtgtgcaccgg
cgagccggcgagccctgcccggtgtgcggggacacgatcctcgaagtctcgttcgcggac
agcgcactgcagtactgcccgacatgccagacaggcggcaagcccctcgcggaccgccgc
acgtccaagttcctcaagtag
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