Semicossyphus pulcher (California sheephead): 138583593
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Entry
138583593 CDS
T10596
Symbol
samd4a
Name
(RefSeq) protein Smaug homolog 1
KO
K27396
protein Smaug
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spul03019
]
138583593 (samd4a)
Messenger RNA biogenesis [BR:
spul03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
138583593 (samd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_3
Motif
Other DBs
NCBI-GeneID:
138583593
NCBI-ProteinID:
XP_069511628
LinkDB
All DBs
Position
Unknown
AA seq
719 aa
AA seq
DB search
MMFRDQVGVLASWFKGWNECEQTVALLSLLKRVSRTQARFLQLCLEHSLAECTELQVLEG
EANNPGVISQWQGESKERVISLVLTHLPLLKPGNVEAKGEYMRLLPRILAHTIEHGHHLE
ESRQLLSYALIHPATSLEDRAALALWLNHLEERAAARGDSLERPPPSGQHHHHHHQTTPP
STLSSSGSSSSTNTSSSGNLYSLHHQRYGSDDRLNGWQSSRDSGLGGGWHQQQQGCENGH
LLLYPSSSVPATINTVGTGNTILTSGGSQQHSPLKRSVSLTPPMSGPSNQPLGHVWLSQE
DLRTARGPAPDHAPLSPQSSIASSGSGGSEHLEEAVLGGGSGLHRSSFHEDGSGMRDVPA
WLKSLRLHKYAALFSTMTYDEMMSLTEEQLEAQKVTKGARHKIVISILKLKERQNLLRSL
EKDVLEGSNLRSPLQELHQMIMTPIKAFTGGEDTSLQRPLLSAEGKSAAPGAHLSGGSGG
EAESGTSVIAEGDLPGQFTRVMGKVCTQLLVSRSDEDNISSYLQLIDKCLIHESFTETQK
KRLLSWKQQVQRLFRSIPRKTLLDIAGYRTQRSRFGQSNSLPTASCVGGSVSARRSLRQF
QMPSRSLPGARLGLLGSGGLLGPTPRSSSSTPTGPKQGRQGLWFANPGGSNSMPSRTHSS
VQRTRSLPVHTTPQTMVMFQQADLQLPVTEPDINNRLESLCLSMTEHALGDGADRTSTI
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcgcgatcaggtgggcgtgctagccagctggttcaagggatggaacgagtgc
gagcagacggtggctctgctgtccctgctgaagagggtgagccggacccaggcacggttc
ctgcagctctgtctggagcactccctcgccgagtgcaccgaactgcaggtcctggaggga
gaggccaacaacccaggggtcatcagccagtggcagggtgagtccaaggagcgggtcatc
tctcttgtccttacccatctccccctgcttaaacccggcaatgttgaagccaagggcgag
tacatgcgcttgctgccacgcatcctggcccacaccatcgagcatggtcatcacctggag
gagtctcgccagctcctttcctatgccctcatccatcctgcaacctccctggaggaccgc
gctgcgctggcactttggctcaaccacctggaggagagggctgctgcccgaggagactca
ctggaaaggcctcctccatccgggcagcaccaccatcatcaccaccagaccactcctcca
tccaccctcagctcatcaggatcttcctcctccactaacacatcttcatcaggcaatctc
tactcactacaccaccagcgctacggctcagatgaccgcctaaacgggtggcagagctcc
agggattcggggctgggcggaggctggcatcagcagcagcagggctgtgagaacgggcac
ctccttctctacccgtcatcctctgtgccagcaactatcaacactgttggaactggaaac
actatcctgacgagtggtggcagccagcagcacagtcccctcaagcgttcagtgtccctc
acgcctcccatgagcggccccagcaaccagcctttaggccacgtctggctgtcccaggag
gacctacggaccgctagaggcccagccccagaccacgcacctctctcgccccagagtagc
atcgcctcctcgggtagtggaggcagtgagcacctggaagaggctgttttaggaggaggt
tcaggcctgcatcggagctccttccatgaggacggcagtggcatgagggatgttcctgcg
tggctgaagagtctccgcctccataagtacgctgctctcttctccacaatgacctacgat
gagatgatgtctctcactgaagagcagctagaggcacagaaagtcaccaaaggagcaaga
cacaaaatcgttatcagcattctgaagctcaaagagaggcagaatctacttcgcagtctg
gaaaaggatgtgttggaaggcagtaatctgcgctccccgctgcaggagctgcaccagatg
atcatgacgcctatcaaggctttcactggtggcgaggacacctccctgcagcgccccctg
ctgagcgccgagggcaagagtgctgcgcctggtgcccatcttagtgggggtagtggaggg
gaggctgagtcaggcacaagcgtcatagctgagggagatctacccggccagttcacacgc
gtcatgggcaaagtttgtacccagctcctggtgtcgaggtcagatgaggacaacatcagc
tcctacctacagctcatcgacaagtgcctaatccatgagtccttcactgagacgcagaag
aagaggctgttgtcatggaaacaacaggtccagaggctgttccggtccattccacggaaa
acccttctcgacatagcagggtaccgaacgcagaggagccgttttggccagtccaactct
ctccccaccgctagctgtgtcgggggcagcgtgtcggccaggaggagccttcgccagttc
cagatgccctccaggagcttacctggtgccaggctgggcctgctgggcagcggagggctg
cttggacccacacctcgtagctccagcagcacacccactggtcccaagcaggggagacag
ggtctgtggtttgccaaccctggaggaagcaacagcatgcccagccggacccacagctcg
gtgcagaggactcgctccctgccggtccacaccacgccacaaacaatggtcatgtttcaa
caagccgatcttcagttacctgtgacggagccggacatcaacaatcgccttgagtctctg
tgtctgagtatgacagagcacgccttgggagacggtgctgatcgcacttcaacaatatga
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