Semicossyphus pulcher (California sheephead): 138583606
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Entry
138583606 CDS
T10596
Symbol
dennd4b
Name
(RefSeq) DENN domain-containing protein 4B
KO
K20163
DENN domain-containing protein 4
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spul04131
]
138583606 (dennd4b)
Membrane trafficking [BR:
spul04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
138583606 (dennd4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
PPR
DUF2464
SPA
Motif
Other DBs
NCBI-GeneID:
138583606
NCBI-ProteinID:
XP_069511607
LinkDB
All DBs
Position
Unknown
AA seq
1517 aa
AA seq
DB search
MTEEKCPQLVDYFVVAGLDPAGPWRPLDEDGKTSTNSSSTPSSSSSSSSSGRAVESVTDL
AVIARGLGEEVPEGFTCIERTLGGHSAELSAGLINNPHLYLCYRRGRDKPPILDLGVLYE
GKEQLKQGWYVIETTPYSRSASLSAGGAPTAHRVFLTYRRALDSQGLHTLGVTDIALLLP
SKGEVAPHTFCRVDKNLNTGMWGPALYVCYKRAVAKANALVYKASLLSRYPEEDLEAFPL
PESVPVFCLPMGVTVESWPLNAKYQLPVFSTFVLTSASGDKVYGAAIQFYESFSRELLSE
RQSVRLGLLSVVDRRPITNRSLQVKKSICVLSHWPFFTVFQKFLTFVYRYSISGPHVLPL
EKHISSFMHNVPFPSPQRPRILVQLSPYDNLLLCQPVSSPLPLSGASFLKLLQNLGPENA
CTLLLAVLTEHKLLLHSLRPDVLTSVSEALVCMSFPLRWLCPYIPLCPLQMADVLLAPMP
FIVGVHSSYFDLYDPPTDVVCVDLDTNTIFQSEDKKPLSWRSLPRKQGKTLFNTLTNLHK
TLEQICTPGQEEATLEFLLTDYDQIYRSQKQLELEIQEAFLRFMSCLLRGYRTFLLPITQ
APSDTTTDCSSLFNLQGFLKSRDRTQQKFYSQLTRTQMFTQFIEECSFVSDRHACLEFFD
ECVQKVDVEKPEEVRLIDLDETHGGEHTVFIMPPEEPQEPDGSECPALYSYETFPTLKPE
LIDRPQDQLRVPTKGSAPSSPAPRRTKQEIKLAQKKAQKYSAVPDMWSKCLLGHCYGLWF
IYLPTFVRAESAKVRALHTAYDVLKHMENRKVVLPDEVCYRILMQLCGQYGQPVLAVRVL
LEMKKAGITPNTITYGYYNKAVLESKWPSTSQGGRLRWAKLRNVLLAVAQFRQPIKRRQK
SGSVGSRGEAMIDPDPDQRLRPQSTLIRQSSWSGLSESSSHESLTGSMVKSNSLNSMKTP
SDKIKLCKKTILRNAGTNGCVDPVSRKPPMGRRDTSTPPPAPPGGVLVRRSQVCLSTFYK
DCAESAEPETDCCQTAERDGRPAGTRDSASRNKGVDENYNNVSSPSRGGLAGKLQQLLTP
TRHRVSVRRAASVDDRRPGGGGGIGRRVSEQRQSRKAQVAETLLKAKERLVSATSESSLS
VGSDMDLTDTPSPAYPLRRSWDANQEGAGLEVLMSSCSLCRSCNSLVYDEEIMAGWTSDD
SNLNSSCPFCNASFVPFLNAEICDPGPVNSAERSNWNVEDEVESAVRPPSVHEPSVRLQC
NGLSDDSSSETSSYSENSRTTTGSSVGGGPQVTVAYLSPLVLRKELESLLENEGEAVLAQ
PQFLENHSIIFWNLVWYFQRLGLPSNLLQLVRASPLVSQLTQSENSAVRVRLLWDTLTPD
TDQWPPLYILWRIHSGVPMRSYSWRRHNHPFSLSFLEEVLRWVGMNEVHKAVTLFLDTLA
KQPGAACTQRSLYREFLFLTLAAMGKDHVAAFDKKYKAAYSRLSGTLGREELRKKRAQPP
SPKAVDCRRSFHPPLEC
NT seq
4554 nt
NT seq
+upstream
nt +downstream
nt
atgacagaggagaaatgtccccagctggtggactactttgtagtggcaggtctggaccct
gcggggccctggaggcccctggacgaggatggaaagacctccaccaactcgtcctcgacg
ccctcgtcctcctcgtcctcgtcttcgtctggccgggcggtggagtcggtgacggacctg
gcagtgatcgcccggggcctcggggaggaggtgccggagggcttcacctgcatcgagagg
acgctgggcggacactcggccgagctgagcgccggcctcatcaacaaccctcacctgtac
ctgtgctaccggcgaggacgagacaaaccgcccatcctggacctgggggttctgtatgag
gggaaggagcagctgaagcagggctggtacgtcatcgagacgacgccttacagccgctcg
gccagcctcagcgccggcggcgccccgacagctcaccgggtgttcctgacgtaccggcgg
gctctggactcgcagggcctccacacgctgggcgtcaccgacatcgccctgctgctgccg
agtaaaggagaggtcgccccgcacaccttctgcagggtggacaagaacctcaacaccggc
atgtggggtccagctctgtacgtgtgctacaagagagccgtggccaaagccaacgcgctg
gtgtacaaggccagcctgctgagtcggtacccagaggaggacctggaggcgtttcctctg
ccggagtcggtgccagtcttctgtctgccgatgggcgtcaccgtggagagctggcctctg
aacgccaagtaccagctgcccgttttctccaccttcgtcctcacctccgcctccggggac
aaggtctacggagcagccatccagttctacgagtcgttctccagggagctgctgtcggag
cggcagagcgtgcggctcgggctgctcagcgtggtcgaccggcggccgatcacaaaccgc
agcctgcaggtgaagaagagcatctgcgtcctctcccactggcccttcttcaccgtcttc
cagaagtttctcaccttcgtgtacagatactccatctccggaccccacgtcctgccgctc
gaaaaacacatctccagcttcatgcacaacgtgccgtttccctccccgcagcggcctcgc
atcctcgttcagctctctccgtatgacaacctgctgctctgccagccggtctcctctcca
ctcccactcagcggtgcgagcttcctgaagctgctgcagaacctcggtccagagaacgcc
tgcacgctgctgctcgccgtcctcacagagcacaagctgctgctacactcgctccgcccc
gacgtcctcacctccgtcagcgaggccctcgtctgtatgagcttcccgctgcgctggctc
tgtccctacatccctctgtgtccgctgcagatggccgacgtgctgctggctccgatgccg
ttcattgtgggcgtccactccagctacttcgacctgtacgacccgccgactgatgtggtg
tgtgtcgacctggataccaacaccatctttcagtcagaggacaagaagcccctgtcatgg
cggtcgttacccaggaagcagggaaagactctgttcaacaccctcaccaacctgcacaag
accctggagcagatttgcactcccggccaggaggaggcgacgctggagttcctgttgacg
gactacgatcagatctacaggagtcagaagcagctggagctggagatccaggaggcgttc
ctccgcttcatgagctgcctgctgcgaggatacagaaccttcctgctgcccatcacgcag
gctccgtcagacaccaccaccgactgcagctcactcttcaacctgcagggtttcctgaag
tctcgggatcgaacgcagcagaagttttacagtcagctgacgaggactcagatgttcaca
cagttcatcgaggagtgttccttcgtcagcgaccgacacgcctgcctcgagttcttcgac
gagtgcgtccagaaggtggacgtggagaagccggaggaggtgaggctgatcgatctggat
gagactcacggcggggaacacacagtcttcatcatgcctcctgaagagccgcaggaacct
gacggctccgagtgtcccgccctctacagttatgaaaccttccccacgctgaagcccgag
ctcatcgaccggcctcaggaccagctccgggtcccgactaaaggaagcgcccccagcagc
cccgcccccagacgcacaaaacaggagatcaagctggcccagaagaaggctcagaagtac
tctgcggtgccggacatgtggtccaagtgtctgctgggtcactgttacggcctctggttc
atctacctgcccaccttcgtgcgggccgagagcgccaaggtgcgcgcgctgcacacggcc
tacgacgtcctcaaacacatggagaaccgcaaggtggtgctgccggacgaggtgtgttac
aggatcctgatgcagctctgtggtcagtacggtcagccggtcctcgccgtccgagtcctg
ctggagatgaagaaggctggaatcacacccaacaccatcacctacggatactacaacaag
gcggtgctggagagcaagtggccgtccaccagtcagggtggacgactccgctgggccaag
ctgaggaacgtcctgctcgctgtggctcagttcaggcagccaatcaaacggaggcagaag
agcggctccgtggggtcgcggggagaagcaatgattgaccctgacccagatcagaggctc
cgcccccagtccactctgattcgtcagtccagctggagcggtctgtccgagagctccagt
cacgagtctctgacgggctcgatggtgaagagcaacagtctgaacagcatgaagacgccc
agtgacaagatcaaactctgcaagaagaccatcctccgtaacgcaggtacaaacggctgc
gtggacccagtctcccgcaaacctccgatgggacgcagagacacctccacccctccgccg
gcgccccctggtggtgttctggttcggcggagtcaggtctgcctctccaccttctacaaa
gactgcgccgagtcggccgagccggagacagactgctgtcagacagcagagagagacggc
agacctgcggggacacgggactcggccagcaggaacaaaggtgtagacgagaactacaac
aacgtctcctccccgagcagaggaggcctggcagggaaactccagcagcttctcactccg
accagacacagagtgtcggtcaggcgagccgccagcgtggacgacaggagaccaggagga
ggaggagggatcggacgaagggtgtccgagcagaggcagtccaggaaagctcaagtggct
gaaacgctgctgaaggccaaggagaggctcgtcagcgctacctcagagagttcgttgtct
gtaggaagtgacatggacctgacggacacgcccagtccagcctatcctctgcgcaggtcc
tgggacgccaatcaagagggggcggggctcgaggtgctgatgtccagctgctctctgtgt
cgcagctgtaactctctggtttatgacgaggagatcatggctggctggacgtcagacgac
tccaacctgaactcgtcctgcccgttctgcaacgcctccttcgtccccttcctcaacgct
gagatctgcgaccccggacccgtcaacagtgcggagcgcagcaactggaacgtggaggac
gaggtggagagcgcagtgaggccccctagtgttcatgagccctcggtgcgacttcagtgt
aacggcctgagcgacgactcgagctccgagaccagcagctactcagagaacagcagaacc
accacaggctcctcagtgggcgggggccctcaggtgacagtggcctacctgagtcctcta
gtcctgaggaaggagctggagagtctgctggagaacgagggcgaggcggtcctggctcag
cctcagttcctggagaaccactccatcatcttctggaacctggtctggtacttccagcgg
ctcggtctgcccagtaacctgctgcagctggtccgagcatcgccactggtcagccagctc
acacagtcggagaactcggcagtgagggttcggctcctctgggacaccctgacccccgac
acggaccagtggccgcctctctacatcctctggaggatccacagtggcgtcccgatgagg
agctacagctggcggagacacaaccacccgttctctctgtccttcctggaggaggtgctg
cgctgggtcggcatgaacgaggtgcacaaagctgtcacgctgttcctcgacaccctggcc
aaacagccgggcgccgcctgcacgcagaggagcttgtacagagagttcctcttcctcacg
ctggcagctatgggcaaagaccacgtcgctgcgttcgataagaagtacaaggcggcgtac
tcgcggctcagcggcactctgggccgagaggagctccgtaagaagcgagctcagcctccc
agccccaaagccgtcgactgcagacgcagcttccacccgccgctcgagtgctga
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integrated database retrieval system
