Semicossyphus pulcher (California sheephead): 138583628
Help
Entry
138583628 CDS
T10596
Symbol
dhx16
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138583628 (dhx16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spul03041
]
138583628 (dhx16)
Enzymes [BR:
spul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
138583628 (dhx16)
Spliceosome [BR:
spul03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
138583628 (dhx16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
Cas3-like_C_2
AAA_30
nSTAND3
Flavi_DEAD
PWI
Motif
Other DBs
NCBI-GeneID:
138583628
NCBI-ProteinID:
XP_069511649
LinkDB
All DBs
Position
Unknown
AA seq
1054 aa
AA seq
DB search
MANLEQWVNDRLHDILGLSDRYVSQFMIGTARKASSHEDFVSRLEQTGTIDIDQSVISFA
QELFEKIPRKQVVEKPSRAMEREAIEMDRRNRTYTLLEDSDSDGEAVKETPKGKKKSKEK
DRGNKRKHIRQKKESQSSSEDEAPTRGNSDQRDHKSGMKEEEEEEEWEKEERERQQDIEE
RDAFAERVKQKDKDKTRNITERTDKKAYEEAQKRLKLAEEDQKNMLPELRKRSRWDYLKK
REAEKLEDLEAEIKDDEYLFSTDELTEKERRELEYKRTLCDLAKDYKKAGAKEQEERKNR
YYMPEEKRSKEVPQRDLELEETPMELGGEQGRWEEERLKTASLSFGAKREREQGMRQEQD
KYQLILEEDEMIDFVSTAMTMKGTRMEKDQEAPALSQAELNKQSMQEVRRSLPIFPYRED
LLAAINEHQILVIEGETGSGKTTQIPQYLLEDGYTKGGLKIGCTQPRRVAAMSVAARVAQ
EMGVKLGNEVGYSIRFEDCTSERTVLKYMTDGMLLREFLTEPDLASYSVVIIDEAHERTL
HTDILFGLIKDIARFRPDLKVLVASATLDTERFSCFFDDAPVFRIPGRRFPVDIFYTKAP
EADYLEACVVSVLQIHVTQAPGDVLVFLTGQEEIEACCEMLQERCRRLGSKIAELLVLPI
YANLPSDMQAKIFNPTPPGARKVVVATNIAETSLTIDGIIYVIDPGFCKQKSYNARTGME
SLIVTPCSRASANQRAGRAGRVAAGKCFRLYTAWAFKHEMEESTVPEIQRTNLGNVVLLL
KSLGINDLIHFDFMDPPPHETLVLALEQLYALGALNHLGELTKLGRRMAELPVDPMLSKM
ILASEQYKCSEEVLTIAAMLSVNNSIFYRPKDKVVHADNARMNFVVPGGDHLVLLNVYTQ
WLESGYSTQWCYENFIQFRSMRRARDVRDQLEGLMDRIEVEVVSSQGDSLPIRKAVTAGY
FYHTSRLSKGGYKTVKHQQTVYVHPNSSLFEEQPRWLIYHELVFTTKEFMRQVIEIESSW
LLEVAPHYYKSKELEDSSSKKMPRKQGKTKEELG
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atggccaatctagagcagtgggtgaacgaccgtctccatgacatccttgggttgagtgac
agatacgtgtctcaattcatgatcggcactgcacggaaagcatcaagtcatgaagacttt
gtgagtcgtctcgagcagacgggaacgattgacatcgaccagagtgtgatttcctttgca
caagagctctttgaaaagattcctcgcaagcaggttgttgagaagccgtcccgggcgatg
gaacgagaagccattgaaatggacaggcggaatcggacgtacacgttactggaggacagc
gacagtgatggagaggctgtgaaggagacgccgaaagggaaaaagaaaagcaaggaaaag
gacagaggaaacaagaggaagcacatcagacagaagaaagagagccagtcgtcaagtgag
gacgaagcacctacacggggcaattcagaccaaagggaccacaagtctggaatgaaggaa
gaggaggaagaggaagagtgggagaaggaggagagagagcggcagcaggacattgaagag
cgagatgcttttgctgagcgtgtgaagcagaaagacaaagacaagacgcgcaacataaca
gagaggactgacaaaaaggcttatgaggaagcccagaagaggctgaagttggccgaagag
gatcagaagaatatgctgccagagttgaggaagcgctctcgctgggactatctaaagaag
agagaggcagagaagctggaggacctggaggcagaaatcaaagacgatgagtaccttttc
tctacagacgagctaactgagaaagagagaagggagctggaatacaaacgcaccctttgt
gacctggctaaagactacaaaaaggccggtgccaaggaacaagaggagaggaagaacaga
tactacatgccggaagagaagaggagcaaggaggtgcctcagagagacctggagctggag
gagactcccatggagctgggaggagagcagggccgctgggaggaggagaggctgaagacg
gcctccctcagcttcggcgccaagagggagcgagagcaaggcatgaggcaggagcaggat
aagtaccagctgatcctggaggaggacgagatgatcgactttgtcagcactgccatgacc
atgaagggaacgcgtatggaaaaggatcaggaggctccagctctgtcacaggcggagctg
aacaaacagtccatgcaggaggtccgccgcagcctgcccatcttcccttacagagaggac
ctgctggctgccatcaacgagcaccagatcctggtcatagagggagagacgggctcagga
aagaccacccagatcccacagtacctccttgaagatggctacactaaaggaggcctgaag
atcggatgtacgcagcctcgcagagtggcagccatgtcagtggcagccagagtggcgcag
gaaatgggtgtcaagcttgggaatgaggtgggttacagtattcgctttgaggactgcacg
tcagagagaacggtgctcaagtacatgacagacggcatgctgctccgagagtttctcaca
gagcccgacctggcaagctacagtgtggtcatcattgatgaggctcatgagcgtacgctg
cacacagacatcctgtttggtctgattaaagacatcgccaggttcagaccggacctgaag
gtgctggtggccagtgctactctggacacagagcgcttctcctgcttctttgatgacgcg
cctgtcttcaggatacctggcaggaggttccccgttgatatcttctacactaaagctcct
gaggcggactacctggaggcttgtgtggtgtcggtgctgcagatccacgtcacccaggct
cctggagacgttctggttttcctcactggacaggaggaaatcgaagcctgttgcgagatg
ctccaggagagatgcaggcggcttggctctaagatagcagagctgctggtgcttccaatc
tatgctaacctgccatcagacatgcaggccaagatcttcaacccgactccccctggagcc
cgaaaggtggttgtggccaccaacatagcagaaacctcactgaccatagatggcatcatc
tacgtcatcgaccccggcttctgcaaacagaagagttacaatgcccgcaccggcatggag
tcactcatcgtcacgccctgctcgcgggcttctgccaaccagagagcaggccgtgcaggc
agagtggctgctgggaaatgtttcaggctctacacagcctgggccttcaaacacgagatg
gaggaaagcaccgtgcctgagattcagaggacaaacctgggaaatgtagtcctgctgctg
aagagtttaggaatcaatgacctcattcactttgacttcatggaccctcctcctcatgag
actctggtcttggcgctggagcagctctacgctctgggagcactcaatcacctgggagag
ctcaccaagctgggtcgccggatggctgagcttccggtggaccccatgctgagcaagatg
atcctggcctctgagcagtacaaatgttccgaggaagtgctgacgatagccgcaatgttg
tcagtgaacaactcaattttctatcggcccaaagacaaggtggtgcacgccgacaacgcc
aggatgaactttgtggtgccaggtggagaccacctggtgctgctcaacgtctacacacag
tggctggagagcggttactccactcaatggtgctacgagaacttcatccagttccgctcc
atgagacgagcccgggacgtccgggaccagctggagggtctgatggatcggattgaggtg
gaggtggtcagctcccagggagacagcttgcccattcgtaaggcggtgacggcaggatat
ttctatcacacgtctcgactgagcaaaggcggctacaagacggtgaagcaccagcagacg
gtctacgtccaccccaacagctctctgttcgaggagcagccccgctggctgatctaccac
gagctcgtcttcaccaccaaggagttcatgagacaggtgatcgagatagagagcagctgg
ctgcttgaagtggctcctcactactacaagagcaaagagctggaggacagcagcagcaag
aagatgccccgcaagcaggggaagacaaaagaggagctgggatga
DBGET
integrated database retrieval system
