Semicossyphus pulcher (California sheephead): 138583774
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Entry
138583774 CDS
T10596
Symbol
vars1
Name
(RefSeq) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
138583774 (vars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
spul01007
]
138583774 (vars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spul03016
]
138583774 (vars1)
Enzymes [BR:
spul01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
138583774 (vars1)
Amino acid related enzymes [BR:
spul01007
]
Aminoacyl-tRNA synthetase
Class I (U)
138583774 (vars1)
Transfer RNA biogenesis [BR:
spul03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
138583774 (vars1)
Prokaryotic type
138583774 (vars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
GST_C
tRNA-synt_1_2
Val_tRNA-synt_C
Arc1p_N_like
GST_C_2
tRNA-synt_1e
GST_C_3
Jag_N
FAM199X
Motif
Other DBs
NCBI-GeneID:
138583774
NCBI-ProteinID:
XP_069511864
LinkDB
All DBs
Position
Unknown
AA seq
1285 aa
AA seq
DB search
MATLYVSPHTDDFRSLLALVAAGYYPSSELNIIKEDPPASLNARSRPTLVLGTGEGDSVL
CGASAVAWYLASQGKRTGLSTKQQSQVWQWLSFADNELTPVSCAVVFPLMGLMGVDKKLQ
QSSQAELMRVLKVLEKALELRTFLVGEIITLADMAVAAAVLLPFKYVLEPTDRKVLINVT
RWFTTCINQPRFLKVFGKITLCEKMVPVTMKTNAAASAVKAKAANAKAANASPAVNSDAA
TENGPPKTEAQLKKEAKKREKLEKFQQKKDMEAKKKTQAPTEKKAKPEKKELGVITYNVA
TAPGEKKDVISPLPDSYSPQYVEAAWYPWWEKQGFFKPEYGKKSISEQNPRGIFMMCIPP
PNVTGSLHLGHALTNAIQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLMRERGMS
RHDLGRENFITEVWKWKNEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSYAVQEAFIRMH
EEGVIYRSKRLVNWSCTLNSAISDIEVDKKELTGRTLLPVPGYKEKVEFGVLVSFAYKVD
GSSEEVIVATTRIETMLGDSAVAVHPADPRYQHLKGKMVLHPFCDRKMPVVFDDFVDMNF
GTGAVKITPAHDHNDYEVGERHNLAFINILDENGLLINVPPPFLGMKRFEARKAVLQALK
ERGQFKEIKDNPMVVPVCSRSKDIVEPLLKPQWYVNCTDMGKQAADAVREGQLKIIPDHH
LKTWFNWLDNIRDWCISRQLWWGHRIPAYFVTVNDASVKPGEDMDGHYWVSGRTEEEARG
KAAKRFNVSVDKITLRQDEDVLDTWFSSGIFPFSIFGWPNENQDLNVFYPGTLLETGHDI
LFFWVARMVMMGLKLTGKLPFKEVYLHAVVRDAHGRKMSKSLGNVIDPLDVITGISLEGL
HAQLTDSNLDPIEVEKAKQGQKSDYPNGIPECGTDALRFALCAYTSQGRDINMDVNRILG
YRHFCNKLWNAVKFAMKTLGDNFVPSEKAQLCGEESVSDRWILSRLSAAVGLCDAGFKAY
DFPAITTAIYNFWLYELCDVYLESVKPVFSKAEEDSSSQRQALVCRQTLYTCLEVGLRIL
SPMMPFVTEELYQRLPRRRPQSDPPSITVMPYPETVEFCWHSEEVDRDMEFVMTVVKTIR
SLRADYNLTKTRADCYLQCIDSATASLVQKYSLQIQTLSYSQAVIPLTANQPVPEGCAVA
IASDRCTVNLMLKGLIDVEKEMAKLMAKKGDLEKQMEKLKEKMAKSDYKEKVPVKVQEQD
AEKLRQSQTELEKVKEAMENFRKMM
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atggccactctttacgtgtcccctcacactgatgacttcaggagccttctggctcttgta
gctgcagggtattatccgtcctccgagctcaacattattaaagaggatcctcctgcgtca
ctgaatgcccgctccagaccaaccctggttctgggcactggagaaggtgactccgtcctg
tgtggggcttctgctgtagcatggtacctggcctcacaggggaagaggaccggcttaagc
acaaagcagcagagccaggtttggcagtggctcagctttgccgacaatgagctcaccccg
gtgtcctgtgcagtggtcttccctctgatggggttgatgggagtggataagaagctccag
cagagttcccaggcagagttgatgcgtgttcttaaggttcttgagaaggcactggaactc
agaaccttcttggtgggggagatcatcaccctggctgatatggctgtagctgcagctgtt
cttctaccttttaaatatgtgttggagccaactgacaggaaggtcttgatcaatgttacc
aggtggttcacaacctgcataaatcagcccaggttccttaaggtgtttgggaagatcaca
ctttgtgagaagatggtgccagttacaatgaagacaaatgctgctgcaagtgctgtcaaa
gctaaagctgccaatgccaaagctgccaatgccagtcctgctgttaattcagatgctgct
acagagaacggcccaccaaagacagaagcccagctgaagaaggaagctaagaagagagaa
aagctagaaaaattccagcaaaagaaggatatggaggccaagaaaaagacacaggcacca
acagagaaaaaggccaaaccggagaagaaggaattgggggtgatcacgtacaacgtcgcc
accgctcctggggagaaaaaagatgtcatcagtccacttcctgactcctacagtcctcag
tatgtggaggccgcctggtatccatggtgggagaagcagggattcttcaagccagagtat
gggaagaagagtatcagtgagcagaaccctcgcggcatcttcatgatgtgtatccctcca
cctaatgtgaccggatccctccacctgggtcacgccctcaccaacgccattcaagactct
ctgaccagatggcaccgtatgcgaggcgagaccaccttgtggaacccgggctgtgatcac
gctggtatcgccacccaggtggtggtggagaaaaagctgatgagggagaggggtatgagt
cgccacgacctgggcagagaaaactttatcacggaggtctggaaatggaagaacgagaag
ggagaccgcatctaccaccagctgaagaagctgggctcctctctggactgggacagagcc
tgcttcactatggaccctaaactgtcctatgctgttcaagaagcttttatccgcatgcac
gaggagggagtgatctacaggagcaagaggctggtcaactggtcctgcacactcaactct
gccatctctgacatagaggtggataagaaagagctcactggaaggactctgctgcctgtt
cctggttacaaagagaaagtagagtttggagtgctggtgtctttcgcctacaaagtagac
ggttcaagcgaggaggtgattgtggcaacaactcgtattgagactatgctgggagactct
gccgtagccgtccaccctgctgaccccagatatcagcatctgaaggggaaaatggtgctg
catcccttctgtgaccgcaagatgccggttgtgttcgacgactttgtcgacatgaacttt
ggaacaggtgctgtcaaaatcaccccggctcatgaccataacgactacgaggttggagag
agacacaatctggccttcatcaacatcttggatgagaatggcctgctcattaacgtgcct
cctccgttcctgggcatgaagcgtttcgaggcaaggaaggctgtgctgcaggctcttaag
gagagaggccagtttaaagagatcaaagacaaccctatggttgtcccagtatgcagtcgt
tccaaggacattgtggagccactgctgaagccgcagtggtatgtgaactgcacagacatg
ggcaagcaggccgcagacgctgtcagagagggacagctcaaaatcatccctgatcaccac
ctcaagacgtggttcaactggttggacaacatcagggactggtgtatctcccggcagctg
tggtggggtcaccgtattcccgcttacttcgtcactgtcaacgacgcctctgtgaaacca
ggagaggacatggacggtcattactgggtgagcgggagaacggaggaggaggccagaggg
aaggcagcaaaacgctttaatgtgtctgttgacaaaattaccctcagacaggatgaggat
gttttggacacttggttctcgtctggcattttccccttctccatcttcggatggcctaat
gagaaccaggacctgaatgtcttctaccccggcaccttgctggagacgggtcatgacatc
ctcttcttctgggtcgctcgtatggtgatgatgggcctcaaactgaccggcaagctgccc
ttcaaagaggtgtatctgcacgccgtggtgagggacgcccacggcaggaagatgagcaaa
tctctgggcaacgtcattgaccctctggacgtcattacagggatctccctcgagggcctt
catgcccagttgacggacagcaacttggatccaattgaggtggagaaggcgaagcagggc
cagaagtcagactatccaaatggcatcccagagtgtggcacagatgctctccgctttgcc
ctgtgtgcctacaccagccaaggcagggatataaacatggatgtcaaccgcatcctgggt
taccgtcacttctgcaacaagctgtggaacgctgtcaagtttgccatgaagacactggga
gacaactttgtaccatcagagaaagcccagctgtgtggcgaggagagtgtatcagacagg
tggatcctgtctagactgagtgctgctgtcggtctgtgtgatgctggcttcaaggcgtac
gacttcccggctatcaccaccgccatctacaacttctggctgtacgagctctgcgacgtc
tatctggaaagtgtgaaaccagtgttcagtaaagcagaggaggacagcagcagccagagg
caggctttggtgtgcagacagaccctttacacctgtttagaagtcggtctgcgcattttg
tctcccatgatgccgtttgtcactgaagaactctaccagaggttaccacgacgacgacct
cagagtgatccccccagcatcactgtcatgccctaccctgaaactgtggagttctgctgg
cacagcgaggaggtcgaccgagacatggagttcgtgatgactgtggtcaagacgatccgg
tccctgagggccgactacaacctcaccaagaccagagctgactgttatcttcagtgcatc
gactctgcgactgcgtccctggtgcagaaatacagtctgcagattcagaccttgtcttat
tctcaggccgtcatccctctgacagcaaaccagcctgtcccagaaggctgtgctgtagca
atcgcctctgacagatgtactgtcaaccttatgctcaagggcctcattgacgtagaaaag
gaaatggctaagctgatggcaaagaagggcgacttggagaaacagatggagaaactgaaa
gagaaaatggcaaagagtgactacaaggaaaaggtgccagtgaaggtgcaggagcaggat
gcagagaagctacggcagagccaaaccgaactggagaaagtgaaagaggccatggagaac
ttcaggaaaatgatgtaa
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