Semicossyphus pulcher (California sheephead): 138584105
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Entry
138584105 CDS
T10596
Symbol
fdps
Name
(RefSeq) farnesyl pyrophosphate synthase isoform X1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul00900
Terpenoid backbone biosynthesis
spul01100
Metabolic pathways
Module
spul_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
138584105 (fdps)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
spul01006
]
138584105 (fdps)
Enzymes [BR:
spul01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
138584105 (fdps)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
138584105 (fdps)
Prenyltransferases [BR:
spul01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
138584105 (fdps)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Pfc11_Rna14-15-ID
Motif
Other DBs
NCBI-GeneID:
138584105
NCBI-ProteinID:
XP_069512355
LinkDB
All DBs
Position
Unknown
AA seq
397 aa
AA seq
DB search
MRRLLSCVLNAPKMIRTKWLSASPPKLKNSSLLLCTSSFQGDSICNGTHSKKGLLSDPQL
FEAQFEELVTELAEQDLTDPALADALKRLREVLVYNSPGGKRNRGLSVIGSLRELLPPTQ
LTQDTVQRALMVGWCIELLQAFFLVADDIMDASVTRRGQPCWYKKDGIGLDAINDSFLLE
ASIYRLLRRHCRDQPYYVHLLELFTETSFQTELGQALDLMTAPPGQIDLDRFTLERYKAI
VKYKTAFYSFYLPVAAAMYMAGIESEEEHNNAKHILLEMGEFFQIQDDYLDCYGDPAVTG
KIGTDIQDNKCSWLVVKALEIMTAEQRTELEACYGRHDDASVEKVKVLYDTLQMPTLYHR
YEDESYQRLQKLIACHAQNLPHSVFLNFAKKIYKRNK
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgagacgcctgctgagctgtgtccttaatgcccctaaaatgatcaggaccaagtggctg
tccgcctccccgcctaagttaaaaaactcatctcttctgttgtgcacctcgtctttccag
ggggacagcatttgcaacgggacgcacagcaaaaaagggttgctatcggaccctcagctt
tttgaagcccagtttgaggagttagtgacggagctggcagagcaggacctcaccgatcct
gcgctagctgatgctctgaaaagactgagagaggttttggtgtacaattcccctggaggc
aagaggaaccgaggcctgtctgtgattggctcactgagggagcttctcccacccactcag
ctcacacaggacacagtgcagagggctctgatggttggttggtgcattgagttgcttcag
gcatttttcctggtggcagatgatatcatggacgcatctgtgactcggagaggacagccc
tgctggtacaagaaggatgggataggtctggatgccatcaatgattcatttctcctagag
gcgtcaatctacagactacttcgcagacattgcagggatcagccatactacgtccaccta
ctggagctttttactgagacatcttttcagacagagctgggccaggctctggacctcatg
acggccccccctggtcagattgacctcgacagattcaccttggagagatataaagctatt
gtaaaatacaagacggccttttactccttttacctcccagtggcagctgcaatgtacatg
gctggaattgagagtgaagaggaacacaataatgccaaacacatcctgctggagatggga
gagttctttcaaatacaggacgactatttggactgttatggagaccccgctgtgacagga
aagattggtacagacatccaggataacaaatgcagctggctggttgtgaaagctctggaa
atcatgacagctgaacagagaacagagctggaggcatgttatggacgccacgatgatgcc
agcgtggagaaggtcaaagtcctgtacgacaccctgcagatgccgacactgtaccacaga
tatgaagatgagagctaccagcggctacagaaactcatcgcatgtcacgctcaaaacctc
ccccactcagtcttcctcaactttgccaagaagatctacaaaaggaacaagtga
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