Semicossyphus pulcher (California sheephead): 138584175
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Entry
138584175 CDS
T10596
Symbol
rorc
Name
(RefSeq) nuclear receptor ROR-alpha A
KO
K08532
RAR-related orphan receptor alpha
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spul03000
]
138584175 (rorc)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
spul03310
]
138584175 (rorc)
Transcription factors [BR:
spul03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
138584175 (rorc)
Nuclear receptors [BR:
spul03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
138584175 (rorc)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
138584175
NCBI-ProteinID:
XP_069512451
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All DBs
Position
Unknown
AA seq
528 aa
AA seq
DB search
MFSNACAGPGAKQQQQQQQQCFDRRVMEYEELDVLQSDTPIKTGGVVSKKTHLTQIEVIP
CKICGDKSSGVHYGVITCEGCKGFFRRSQLPTVSYSCSRQSNCQIDRASRNRCQHCRLQK
CLAQGMSRDAVKFGRMSKRQRDSLIAEVERHRQQQQQQQQQLQGDAQSILSYPTKARQDR
SPQLLQPMAYPREAELLSYTTDVHPYLLCSPNESQVTGMIYRGSSVSPTLRSQGRGDNSG
HPDMRGFNSRPPSNDLMAIHPFNPLEDPYSLYPHSLRNIDELCASIVRSHRETSQYRVEE
LQALRWKLFSRDEIQAYQSKSVDEMWQHCAIRLTDAVQYVVEFAKHIPGFRMLSQNDQIA
LLKTGSMEVVLVRMSRFFNTENNTVFFDGKFAGVEVLKSLACGDLITAVFDFAHGMCALK
LTEQQIALFSALVLINADRPSLEDRSRVQRVQRSVELGLTHILHRDNQENLMHKLYQRMA
VLRSLCSLHMEKLRWFSQRYPLTAHSLFPPLYKELFASESELLPGTIH
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgttttcaaatgcctgcgccggcccgggcgctaaacaacaacaacaacaacaacaacag
tgttttgacaggagagttatggaatatgaggagctcgacgtgcttcaaagtgacaccccc
attaaaacaggaggagtcgtgtccaagaagactcatttgacccagattgaagttatccca
tgcaagatctgcggtgataagtcctctggagtgcattatggagtcatcacatgtgagggc
tgcaagggatttttccggcgtagccagcttcctactgtatcctactcctgctccaggcag
agcaactgtcagatcgaccgagcaagccgcaaccgctgccaacactgccgcctgcagaag
tgcctggcacagggcatgagcagagatgcggtgaagtttggacgaatgtctaaacgtcag
cgggactctctgatcgctgaagtggagaggcaccgacagcagcagcagcagcaacagcag
caacttcagggagatgctcagtccatcctgtcctaccccaccaaggcccgacaagaccgc
tccccgcagctcctccagcccatggcttatcccagggaggccgagctgctgtcatacacc
acggatgttcatccttacctgttgtgctccccgaatgagtcgcaggtaacaggaatgatc
taccgaggctcctccgtctctcccacactgagatcccaggggaggggggacaacagcgga
caccctgacatgagaggatttaactccagaccgccgtccaacgatctgatggcgattcat
cccttcaaccctctggaggatccgtacagcctctatcctcactctctgagaaacatagat
gagctgtgtgccagcatcgtgcgctcccacagagagacgagccagtacagagtggaggag
ctgcaggccctcagatggaagctgttcagcagagacgagatccaagcctaccagagcaaa
tcagtggacgagatgtggcagcactgtgccatccgactgaccgatgccgtgcagtacgtg
gtggagttcgcaaaacacatcccaggtttccgcatgctcagccagaacgaccagattgct
ctcctgaagactggctccatggaggtggtcctggtcaggatgagccgcttcttcaacaca
gagaacaacactgtcttctttgacgggaagtttgctggcgtagaagtcttgaagtctttg
gcttgtggtgatttaatcacagccgtgtttgactttgctcatggcatgtgtgctctgaag
ctcactgagcagcagatcgctctcttcagtgctctggtgctgatcaatgcagatcgtcca
tctctggaggacagaagcagagttcagcgagtgcagagaagcgtggagttaggactcaca
cacatcctgcaccgagacaaccaagaaaacctaatgcacaagctctaccagaggatggcg
gtgttgcgttcactgtgcagcctgcacatggagaagctgcgctggttcagtcagcgttac
ccgctcacagctcactctctgttccctcctctctacaaggagctgttcgcctctgagtcc
gagctgctgccggggaccattcactga
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