Semicossyphus pulcher (California sheephead): 138584261
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Entry
138584261 CDS
T10596
Name
(RefSeq) neural-cadherin
KO
K27892
neural-cadherin
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
Cell adhesion molecules [BR:
spul04515
]
Cadherins
Cadherin related
138584261
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138584261
NCBI-ProteinID:
XP_069512549
LinkDB
All DBs
Position
Unknown
AA seq
2936 aa
AA seq
DB search
MTKAAAGPVLLHSLLLHLLPLLLHVSPVCLSAQPGHQTRFFGQIAENSPAGTPVDGVLMS
LGPSGCPGADLQSCLKGDYASDFRLVHYGGHRNHRGHLGLVSAKALDREFIAMYELTVEL
PPRCLRRPAAVQVEVSDRNDNIPRFTGRNQTVEADELTPLGSELARFNAKDGDAERNGRV
TFYASPESHLLHVVPQTGQVRLVGSLLGVSQVTLRLYVRDGGDVALTGEPVFLCVNVRSP
SRARRRPRALSEELTYTVTVPDHVRVGDLVFTVPDQRFDQRRFEVISEQDSPVQIERDSG
RLYLASSLREPAEVMVKIQNIRGDEWYLCRLTLSMPSQADLQWAMFPSPYLAAVGPDASL
GSVVYRLSAQQRDGTLGQVQFFLLDGGEECFEVDRRSGEIRTTGRPLTPSKEYLLQLQAI
DGRGRKGPPAAVSILAGYRPPQFTNSSYSLNVPENTAVGQPVAVVQALSFQKKSLSYMLL
VNPGNLFSINQESGALSLTRSVDYESGHNLHTLQVRASEPDTGLSGVAEVVVHITDENDC
TPEFLHSIYTRDNIPESIAPGTSLLQVLARDCDSGVNSELSYFVHGGDFDITSGGVVSPA
RRLDYERPNHVYEFVVVAVDAGTPPRTGTASVRIRVANSNDEAPVFSQSVYKTFLSEDAG
PDTLVAIVHANDPDGDAVSYAITGGNEDSNFQLDNQKGIIKLRRSPPPRLRGPQYVLNIT
ATDDNASGGPYPLSSSAQVIVGINDINNNKPVFQECQNYSLNAGVLENQPPGTFVLRVQA
HDADMGVNGEVKYGIMHRDGVSSGFDIDPDTGVISTTVSFDRERQREFTLSVTATDQAEE
PLIGICQITVLIADQNDNDPKFENSRYQYFLREDTPVGTSFLRAAAHDDDQGSNAAIAYS
LSNQKPAYLHINPSTGWIYVNHPISQTSRINQQIVASDGGNRSSSVELTVIITNVHNQPP
HWEKPEYWVTVPENTVRDAKIVTIKATSPLGDPRVTYNLEEGQVPETNMPVRFYIKPNRA
DSSASILVAENLDYETTRFFTLRVRVQNVAAVPLASFTTVYVNVTDVNDNVPFFLSSTYE
ATVPEGAEIGTSVAQVSATDLDSGLHGRIHYVILKDESGDSQFFSIDSRSGVIVTRASFD
REQKASYLIEVQSQDGSESARQGQQGQPNTDTAYVRIFITDVNDNAPAFPQPVYEVSVEE
DKEVGFVLITVTANDEDEGANAKLRYQITSGNTMGTFDVEPEVGTIFVAQPLDYEMEQRY
ELRLVASDGKWENETLVVVQVVNRNDEAPVFSQTEYHAAVTEELTQLPVLMLEVSATDPD
QEADQTALRYSLHGQGAGGEFTIDERTGRIYAQRRLDREERAAWRFLVLATDEGGAGLTG
FADVLLEVQDVNDNAPFFPCPAMEVDGCFVGQVPENSPADTSVMEMRAMDLDDPNEGKNA
MLTYSIIKNVRNEINLNLFSINASTGTIYTVLRSLDREAEERYLVVVEARDGGGLAGTGT
ATITVSDVNDHPPVFTQRLYTTQVTEDLEVNSEVLVVSATDGDEGENAVVTFSIVGGDED
RKFFVETDKVNRRGVVKLKKKVDFEKPQERTFNLTLKAEDADFFSLAYCVVQVEDSNDHA
PVFFPQFYESPAMSEDVPVGTIVAQVTASDLDSGQNGRFSYSISRESDPYNQFLVDQSGW
VVVADSLDREKISQHRIMVLATDAGSPPLTGTAIVMVPVLDINDNGPEFEVPYKPVVWEN
TAAPQAVQMNETSLLLHATDRDTSTNGGPFSIRLLMLTSDATNFNLTDFRNGSAAITALR
TFDRERQKEYHLPILMIDSGSPPMSSTSTLTVIIGDRNDHPHSPGHTNFIVYSYEGILPT
TLLGRVQSPDLDDWSEKVYRFEGKPSRLFSMNQSSGQLSIREGTPPGSYHLQVRVSDLTW
PDVTSTAQVEVRELQQDALQNAASVRISNLTVEDFFSSSGSEESRFSRLGRVLAELLPTL
PESVQIFSVSDAGQPGEKALNVWFAAHGSPYYKAEKLHGYVAANKAKVEAVLGVSISQVG
VDDCPHTDCSQSGGCSSDVSFSQAPKALSGGNISLVSLSAKSTARCGCRGREVIHLPCSA
CPTNPCLNGGTCQDGPVGYRCKCPPMFDGPECQQTKHSFGGQGYAWFPPIMPCFQSHISL
EFLAESANGLLLYNGPLGHPHSGEQEDFIAVELRNGVPALSINHGSGTLTLQLPPKSTVT
DRRWHRLDIVSDGKAVQLILDQCGGVAANEVEGVGGEDQDMDESGCRAAGETPGNQRYLN
VFQPLQLGGVKETSPHRRYRSFTGCIRNLMVDSQVYDLASPGESVDSSPGCRLTDGVCVT
AAGPSCGAQASCLADWGSFSCECHAGYTGHKCDKAVPEFSFDSGSAVRYQLRGGGSSRRT
NVQLLLRTRASSGTLLSVTSREANEYIVLEIAEGHLSVRANLGDGAHALRLPGQRVDIGQ
WLQVSLSRHDNLFTLRLEQGGGSREVQARLGSRREIVVHPASVMVGNTPNAGDKADFQGC
LRDVRFNSQVLPLDGQSRDLVTVLERRGVTSGCSSDACSSQPCRSPLRCIDLWRKHQCRC
PGSQVTVTEDSGEQRCVPSPCGPSSCRNRGVCQALSPDSYRCRCQEGFRGQRCELGQVKG
HRLAALSPSSILAISMCLLVFFAVLVAVTVWNQKGSRNKFRKRGVYHIPAEHESWEDIRE
NILNYNEEGGGEQDQNGYDITELKRPLCSSLSQSSSCTTAPLIKSSPGSQEEVHPSGSSC
SSGAPYLSIPHHHHHHHHQHTTTSNYTSDSTYANFTAPVGREVEPSDAGSYVDVPSASRS
HVDFKSYVSRIIWEADNDSEAFPLDAYHVWCVEGTGSSAGSLSSLGSGASRRNISSAPCE
EEEDEGGFVCDRLSRWGPKFQALSEMYDRPQLALTYRDAVEYIQRSHSHDPLPHHH
NT seq
8811 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagctgcagccggaccggttctcctgcacagcctcctcctccacctgctcccg
ctgctgctccacgtctccccggtgtgtctgtccgcgcagcccggtcatcaaacgcgcttt
ttcggacaaatagctgagaactccccggccgggacgccggtggacggggtgctgatgtcg
ctcggacccagcggctgccccggagcggacctgcaatcctgcctgaagggagattacgcg
tcggattttaggctcgttcactatggtggacaccggaaccaccgggggcatctgggtctg
gtctccgccaaagctctggaccgggagtttatagcaatgtacgagctgactgtggagctg
ccgccgaggtgtctgaggagaccggctgctgtccaggtcgaagtgtcggaccggaacgac
aacatcccgcgcttcaccggcaggaaccagacggtggaagcggacgagctgacgccgctc
ggcagcgagctggcccgctttaacgcaaaggacggagacgcagagaggaacggacgggtc
actttttacgcgtcaccggagtctcacctgctgcacgtggtgccacagactgggcaggtg
aggctggtcgggtcactgctgggggtcagccaggtaactctgcgtctatacgtgagggac
ggaggggacgtggcgctgacaggtgagccggtgttcctgtgcgtcaacgtccgcagcccc
agcagagcgcggcggaggccccgggctctgtccgaggagctgacctacaccgtgaccgtc
ccggaccatgtcagggtgggggacctggtgttcacggtgccggaccagaggttcgatcag
cggcggttcgaggtgatctctgagcaggactcaccggtccagatcgagcgggactcgggg
cgtctatacctcgcgagcagcctgcgcgagccggcagaggtgatggtgaagatccagaac
atccgaggtgatgagtggtacctgtgcaggttgactctgagcatgcccagtcaggctgac
ctgcagtgggcgatgtttccctcgccttacctggctgccgtgggtccggacgcctcgctg
ggctctgtggtgtaccgactgtctgcacagcaacgagacgggacgctgggacaggtccag
ttctttctcctggacggtggggaggagtgctttgaggtggaccgtcgctctggtgagatc
aggaccacaggacgacctctgacccccagtaaggagtacctgctgcagctgcaggcgatc
gacgggcgaggtcgtaaagggccgccggctgcggtctccatcctggccgggtatcgcccg
ccgcagttcaccaactcctcctacagcctgaacgttccggagaacacggctgtgggacaa
cccgtggccgtggttcaggccttgtccttccagaagaagagtctgtcctacatgctgctg
gtgaatcctgggaatctgttcagcatcaaccaggagagcggagcgctcagcctcaccagg
tctgtcgactacgagagcggacacaacctccacaccctgcaggtccgcgcctccgagccc
gacaccggcctcagcggcgtcgcagaggttgtcgttcatataacggatgaaaacgactgc
acaccagagttcctgcactccatctacaccagagacaacatacctgagagcatcgcacct
ggaacatccctgctgcaagttctggcccgggactgtgactccggcgtgaactcggagctc
tcttacttcgttcatggcggcgactttgacatcacatcagggggcgtggtcagccccgcc
cgtcgcctggactacgagagacccaatcacgtttacgagttcgtggtggtcgccgtggac
gcagggacgcctcctcgcacgggtaccgcctctgtccgcatccgggttgccaatagcaac
gacgaggcgcccgtcttctctcagagcgtttataaaaccttcctaagcgaggatgccggt
ccagacacgctggtcgccatcgttcacgcaaacgaccccgacggagatgccgtctcttac
gccatcactggcggcaatgaggacagcaacttccagctggacaaccaaaagggcatcatc
aagctgaggaggagtccgcctccgaggctcaggggaccgcagtacgtcctcaacatcacc
gccacggacgacaacgcctctggaggaccgtacccgctcagcagctcggcccaggtcatc
gtgggaatcaacgacatcaacaacaacaagccggtcttccaggagtgtcagaactacagt
ctgaacgcgggggtcctggagaaccagcctccaggcacgtttgtcctgcgagtgcaggcc
cacgacgccgacatgggggtcaacggagaggtcaagtacggcatcatgcacagagacggc
gtgtcatccggcttcgacatcgatcctgacaccggtgtgatcagcacgacggtgagtttc
gaccgggagcgtcagagggagttcacgctgtcggtgacggccacagatcaggccgaggag
ccgctcatcgggatctgtcagatcaccgtcctcatcgccgaccagaacgacaacgacccc
aagtttgagaacagccgctaccagtacttcctgcgtgaggacactccggttggaactagt
ttcctgcgggcggcggcacacgatgacgaccaggggagcaacgcggctatcgcttattct
ctgtccaatcagaagccggcgtacctgcacatcaaccccagtacaggctggatttacgtc
aaccaccccatctcacagacgtccaggatcaaccagcagatcgtggcgtcagacggaggg
aaccgcagcagctccgtggagctcaccgtcatcatcacaaacgtccacaaccagccgccg
cactgggagaagcccgagtactgggtcaccgtgccggaaaacaccgtccgagacgccaag
atagtgacaatcaaggccacgtccccgctcggtgacccccgcgtgacctacaacctggag
gagggtcaggtgccggagaccaacatgcccgtgcggttctacatcaagccgaaccgggcg
gacagctcggcgtccatcctggtggccgagaacctggactacgagacgacgcgcttcttc
acgctcagagttcgagtccagaacgtggccgctgtgccgctcgcgtcgttcaccaccgtc
tacgtcaacgtgacagacgtgaacgacaatgttcctttcttcctgtcgtccacctacgag
gccacggttcctgaaggagcggagatcggcacgtcggtggctcaggtgtcggccactgac
ctggactcgggtctgcacgggaggattcactacgtgatcctgaaggatgagagcggggac
tctcagttcttcagcatcgactcgcgcagcggcgtcatcgtcactcgagcctccttcgat
cgtgagcagaaagcgtcctacctgatcgaggtccagtctcaggacggctctgagtcggcc
aggcagggacagcagggacaacccaacaccgacacggcctacgtcaggatcttcatcacc
gacgtgaacgacaacgccccggcgttcccccagccggtgtacgaggtgagcgtggaggag
gacaaggaggtgggcttcgtcctcatcaccgtcaccgccaacgacgaggacgagggcgcc
aacgccaagctgcgctaccagatcacatcgggaaacaccatgggcaccttcgacgtggag
cccgaggtgggcaccatcttcgtggctcagcctttggactacgagatggagcagcgctac
gagctccggctggtcgcgtccgacgggaagtgggagaacgagacgctggtggtggtgcag
gtggtgaaccgcaacgacgaggcgcccgtcttcagccagaccgagtaccacgccgccgtg
accgaggagctcacccagcttcctgttttaatgctagaggtgtccgccacagatccagac
caggaggccgaccagaccgccctccgctactcccttcatggtcagggcgctggtggtgag
ttcaccattgatgaacgcactggaagaatctacgcccaacgacgcctggaccgcgaggag
cgtgcagcctggagattcctcgtcctcgcaacagacgagggaggcgcaggactcacggga
tttgcagatgtactcttggaggtccaagacgtcaacgacaacgcacccttcttcccgtgc
ccggcaatggaagtagacggatgttttgtcggccaagtgcctgaaaattccccagccgac
acctctgtgatggagatgcgtgccatggacctggacgaccccaacgagggcaagaacgcc
atgctgacctacagcatcatcaagaacgtccggaacgagatcaacctcaatctgttctcc
atcaacgccagcacagggaccatctacacggtcctgcgttctctggatcgtgaggctgag
gagcgttatctggtagtggtggaagccagggatggaggaggattggcgggaacagggaca
gcaactatcacggtttctgacgtcaatgatcacccaccggtcttcacccaaagactctac
acaactcaggtgacagaggacctggaggtgaacagcgaggttctcgtagtttcagccaca
gatggagatgagggtgaaaatgctgtggtaaccttcagcatcgtcggcggggacgaggac
aggaagttcttcgtggagacggacaaagtgaaccgacgcggtgtggtaaaactcaagaag
aaggttgacttcgagaagccccaggagaggactttcaatctgaccctgaaggctgaagac
gctgacttcttcagcctggcgtactgtgttgttcaggtggaagactccaatgaccacgct
cctgtattcttcccacagttctatgagtcacctgccatgtctgaagacgtacctgtgggg
acgattgtcgctcaggttacagcttctgatctcgactcgggccaaaatggacgcttctct
tacagcatttcaagagagtccgacccctacaatcagtttctggtggaccagtccggttgg
gtggtcgtggctgattctctggaccgggagaagatctcgcagcacaggatcatggtcctc
gccacagatgctgggagtccacccttgactggaactgctatcgtaatggtacctgtactt
gacatcaatgacaacggcccagagttcgaggtcccctataagcctgtggtttgggagaac
acggcagcacctcaggcggttcaaatgaacgaaacctcacttctcctccacgccaccgac
cgggacacctccaccaacggaggaccgttctccatacgcctgctcatgctcacatcagac
gccaccaactttaatttgactgacttccgtaatggcagcgcagccatcactgccctccgg
accttcgaccgtgagcggcagaaggaataccatctcccgattctcatgattgacagcggc
tctcctccaatgagctccaccagcacgctgacagtcatcattggtgacaggaacgaccat
ccccactctcctggacacaccaacttcattgtctacagttatgagggtatcctcccgacg
acgctgctcggacgagttcaatcccccgaccttgatgactggagcgagaaggtgtaccgc
ttcgaaggcaaaccatccaggttgttcagtatgaatcagagctccggtcagctcagtatc
agggaggggactcctccgggctcgtaccacctgcaggtccgcgtgtccgacctcacctgg
cccgacgtcacctccacggctcaggtggaggtcagagagctgcagcaggacgcgctgcag
aacgccgcctctgtgcgcatcagcaacctgaccgtggaggactttttcagcagcagtgga
tcagaggagagccggttcagccgtctgggtcgagtgttggcagaactcctgccgacttta
cccgagagcgttcagatcttctccgtgagcgacgccggccagccgggagagaaggcgtta
aacgtgtggtttgctgctcacggctcgccgtactacaaggcggagaagctgcacggatac
gtggctgcaaacaaagcgaaggtggaggccgtgttgggcgtgtccatctctcaggtgggc
gtggacgactgtccgcacacagactgcagtcagtctggaggctgcagcagcgacgtctcg
ttcagccaggccccgaaggctctcagcggcgggaacatttctctggtgtcgctgtcggcc
aaatcaacggctcgctgcggctgcaggggacgagaggtgatccacctgccctgctccgcc
tgccctaccaacccctgcctcaacgggggcacctgccaggacggaccggtgggatacagg
tgtaagtgtcctcccatgttcgacgggcccgagtgccagcagaccaaacacagcttcggc
ggtcagggctacgcctggttccctcccatcatgccttgcttccagagccacatctccctg
gagttcctggccgagtcggcgaacgggctgctgctgtacaacgggccgctcggccaccct
cactccggggagcaggaggacttcatcgctgtcgagttaagaaacggcgttccagctctg
agtataaaccacggatcaggaactctgaccctgcagctcccaccaaagtccaccgtcacc
gaccgacgctggcatcgcctcgacatcgtcagcgacggaaaggccgtgcagctgatcctg
gaccagtgtgggggcgtggcagcgaacgaggtggagggcgtcgggggggaggatcaggac
atggacgagtccggctgcagagctgcaggagaaacacctggaaaccagaggtacctgaat
gtcttccagcctcttcagttgggaggagtaaaggaaacgtctcctcatcgtcgttatcgc
agtttcaccggctgcatccgcaacctgatggtggacagtcaggtgtacgacctggcgtct
ccaggtgagagcgtggacagctcccccggctgcaggctgacagacggggtgtgtgtgacg
gcggccggcccctcctgcggcgctcaggcctcctgcctcgcagactggggctccttcagc
tgcgagtgtcacgcgggatacaccggacacaagtgtgacaaggccgtcccagagttctcc
tttgactcgggcagcgccgtgcggtatcagctcagaggaggcggcagctctcgccgcaca
aacgtccagctgctcctccggaccagagcgtcctccggtaccctgctctccgtcacgtcc
cgggaggccaacgagtacatcgtcctggagatcgcggagggtcacctctcagtccgggct
aacctcggtgacggcgcccacgccctgcggctccccggccagcgcgtggacatcgggcag
tggctgcaggtcagcctcagtcgccatgacaacctgttcaccctgcggctggagcagggc
gggggctcgcgggaggtccaggcccggctggggagccgcagggagatcgtggttcacccg
gccagcgtgatggtcggcaacacgccgaacgccggagacaaggccgactttcagggctgc
ctgagagacgtccgttttaacagccaggtcctccctctggacgggcagagccgggacttg
gtgacagtgctggagaggcggggcgtcacctcgggctgctcgagtgacgcctgcagcagc
caaccgtgccgcagcccgttgcgctgcatcgacctgtggaggaaacaccagtgcaggtgt
cccggcagtcaggtgacggtgacagaggactcaggtgagcagcggtgtgtgccgtcgccc
tgcggtccgtcttcctgccgtaacagaggcgtctgccaggcgctgtcgcccgacagctac
cggtgccgctgccaggaggggttcaggggtcagcgctgtgagctggggcaggtcaaaggt
cacagactcgccgccctcagccccagctccatcctggccatcagcatgtgcctgctcgtc
ttcttcgcggtgctggtggcggtgacggtgtggaaccagaaaggcagccgtaacaagttc
aggaagcgcggagtttatcacatccccgctgaacacgagagctgggaggacatccgggaa
aacatcctcaactacaacgaggagggagggggggagcaggaccagaacggatacgacatc
acggagctgaagcgtccgctctgctccagtctgtcccagtcctcctcctgcaccaccgcc
cctctcatcaagtcctcccccggctcccaggaggaggtgcacccgtccggctcctcctgc
agctcaggcgctccctacctcagcatcccgcatcaccaccaccaccaccatcaccagcac
actaccacctctaactacaccagcgactccacctacgctaacttcaccgctcctgtgggc
cgggaggtggagccgagcgacgcaggaagctatgtggacgtcccgtcggcgtcgcgctct
cacgtggactttaagagttacgtgtcgagaatcatctgggaggcggacaacgacagcgag
gcgttcccgctggacgcgtaccacgtgtggtgcgtggaaggaacagggtcgtctgcagga
agcctcagctcgctggggtcgggagcatcacgtagaaacattagctccgccccctgcgag
gaggaggaggatgaaggagggtttgtttgcgacaggctgtctcgatggggcccgaagttt
caggctctgagcgagatgtacgaccggccccagctggccctcacgtacagggacgcagtg
gaatacatccagaggagccacagccacgacccgctgcctcatcaccactag
DBGET
integrated database retrieval system
