Semicossyphus pulcher (California sheephead): 138584318
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Entry
138584318 CDS
T10596
Symbol
ddx61
Name
(RefSeq) probable ATP-dependent RNA helicase ddx6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03018
RNA degradation
Brite
Enzymes [BR:
spul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138584318 (ddx61)
Messenger RNA biogenesis [BR:
spul03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
138584318 (ddx61)
mRNA degradation factors
5'-3' decay
Decapping complex
138584318 (ddx61)
Chromosome and associated proteins [BR:
spul03036
]
Eukaryotic type
Gene silencing
piRNA pathway
138584318 (ddx61)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138584318
NCBI-ProteinID:
XP_069512617
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MATARTANPATMIGLNKPANGQLRGQTKPAGQQSGVLASVQQPNALQKRTSIPQSSGGIK
FGDDWKKCLELPPKDTRLRTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESI
PIALSGRDILARAKNGTGKSGAYLIPLLERIDLKKDHIQAIVMVPTRELALQVSQISIQI
SKHLGGVKVMATTGGTNLRDDIMRLDETVHVVIATPGRILDLLKKGVAKMDKASMMVMDE
ADKLLSQDFVVLIEDIISFLPKDRQILLYSATFPISVQTFMSKHLQKPYEINLMEELTLK
GITQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSTQRVELLAKKITQLGYSCFYIHAK
MMQEYRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKSAETYLHRIGRSGR
FGHLGLAINLITSEDRYNLKNIEDQLVTEIKPIPGSIDKSLYVAEFHSVDPDDDGGDKNR
ELGAA
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggctacagcaagaacagcaaacccagcaacaatgattggattgaacaaaccagcaaat
gggcagctcagaggacagactaagccagctggacaacagtcaggagtccttgcatctgtt
caacagcccaatgccctccagaaaaggaccagcattcctcagagcagtggaggcatcaag
tttggagatgactggaagaagtgcctggagcttcctccaaaagataccaggttgagaact
tcggatgtgacatcaaccaagggaaatgaatttgaagactactgcctaaagcgggaactt
ttaatgggaatctttgagatgggatgggagaaaccctcccctatccaggaggaaagcatc
cccattgctctgtcaggcagagatattctagcccgagcgaagaatggcacaggaaaaagt
ggagcctacctcattcctctcttggagaggatagaccttaaaaaggatcacatccaggcc
atagtaatggtgccaacaagagagttggctctgcaggtgagccagatcagcattcagatc
agcaagcaccttggaggtgttaaggtcatggctaccacaggtggcacgaacctgagggat
gacatcatgcgcctggatgagactgtgcatgtagtgatcgctacaccaggcagaatactg
gacctgttgaagaagggtgtggcaaaaatggataaagcgtcaatgatggtgatggatgag
gcagacaagctgctgtcccaggactttgtggtcttgattgaagatattatcagctttttg
ccaaaggatcgtcagatcctgctttactctgccactttcccgatcagtgtacagacattc
atgagcaagcacctgcagaagccttatgagatcaacctgatggaggaactgacgctgaag
ggcatcactcagtactacgcctacgtgactgagagacagaaggtccactgtctcaacacg
ctcttttccaggcttcagatcaatcagtcaatcatcttctgtaactcaacacaaagggtt
gagcttctggccaagaaaatcacccaactgggctattcctgcttctacattcatgcaaag
atgatgcaggaatacaggaaccgtgtgttccacgacttcaggaacggtttgtgcagaaac
ctggtgtgcacagatcttttcactcggggaattgacatccaggcagtcaatgtcgtcatc
aattttgacttcccgaaaagtgcagagacctacctgcaccgcattggcagatcagggcgt
tttggtcacctgggtctggccatcaatctgataacttcagaggaccgttacaacctcaag
aacattgaggatcaactggttactgagatcaagcccatcccaggcagcatcgataagagc
ctgtatgtggcagagtttcactctgtggacccggatgatgatggtggagacaaaaacagg
gaattgggagccgcctga
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