KEGG   Semicossyphus pulcher (California sheephead): 138584575
Entry
138584575         CDS       T10596                                 
Symbol
mdc1
Name
(RefSeq) mediator of DNA damage checkpoint protein 1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
spul  Semicossyphus pulcher (California sheephead)
Brite
KEGG Orthology (KO) [BR:spul00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:spul03400]
    138584575 (mdc1)
DNA repair and recombination proteins [BR:spul03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    138584575 (mdc1)
SSDB
Motif
Pfam: BRCT_2 RTT107_BRCT_5 FHA BRCT
Other DBs
NCBI-GeneID: 138584575
NCBI-ProteinID: XP_069512945
LinkDB
Position
Unknown
AA seq 2003 aa
MDATQMINDSILESEDEENEEEKGNKRGRPLAKLCILKNEHIPETELPLFLGDNVLGRDP
NTCTLPLQAPSVSKQHATICISAYRRKGCFSEVDIEALVWDLGSMNGTRKGRLKLTPNVR
YALSEQDALVVADIPCQFVSCAVDGVSSQGDARTPMSRNSEVKARLLDASGEKTGDTSIS
SKKCVNGGPKARVSLPDLEDTKKTPVRSSCLSFEQTPTQPQGTLVPESDSDSDGERGRAG
ERRRKALVSNSDSCKSSPTCSTFLSPANKIVPESEDESPITPSSSTKNRPYRHVSCSKEE
TDIDMGRQQLKEIKALAIVDDSEEEGGREEERAALAGRKCEKSGQHVPVKQDRNVSLTGQ
DDLPIFTPAVVTDVIPAFNMDSDTDMEGEEEGVPSEGPVTSNTNQQADQPPEAAQFHMDS
DTDVDEDNDALDNGPKSEPSSAETKPPRVIPVIQPEGITMDSDTDVDDDDAAVSDTATKA
EPVSRLSTHTADSAPSTQPKDFHLDSDTDVDEEEEKESGTNTTGSKIDETPPRLDIKPSG
PESTPSAHQSSHPDSDTDDEATPAPAVSEPSAASAVTESCTTADRGADLGILSDSDTDAE
DHSPLVIPVVITTLSVSPDSRSEAPQPDYDADTDVDEPSVPPAGEGVNPAELDVGSDTDV
EDEEVDFEEAGEGQIPSLCRENTPGLLVPLLQNCSTPVQLSEGQVEDMETQAFLSPSSGP
HRCAVASAGRPKTLSSLSDSNEDEDFVVAETQSFLLHNRDCQGDREVDHATEPTQAFGLD
SSGDDKEEQSIRGGSFQLGLSDSSHLQGQAQALAMESTQAFVSVEGGVTLEETQAYATTS
DADRPFLENEEATQNYGEEEEDSECSVTSAKEGQVDLALEATQAYISEPLCDSEDETDDE
RQSPASAETQPLDLPTSSSLAMAETQLMSAFEEEETLDEENPERGQRGEAAQPQERHVSK
ALSVAETQPMCTSDNEESDNDEEDSIVSSRERKAKPLQLEDDQTSTLTNSDLSAVATQPM
AMGIDEESDEEDSFPGPRRRKAKRLQIQDESQTTNSQLSAVETQPMATGIDEESDEDDSI
PRQCKRKATRLLIQEDSESQSLPNSGASTITQPLETNAGFQRGRGRQSKAGTSGNTVRGK
RETRSRLREEEEQEECSELPKRQTRGKNTALPTTKDESEEEEEVEHTKRTRGKKSMRQQK
HNEEERLEIERNKKEEKLERERKEKEEQEGLQAENAERLRLEQEREDKERMERERKEQEE
KEKAERAQKEKEEQLERERKGKEEKARLELERAEKEEKERLEREEKERVEKERLETTKRK
LEGRLERESKEQEEQARLEREAKEERERLEKEKQDKEQEKKEEEQENKTEAPARSRRASR
RTIAASSTTQDANNDDVPARRTRSRSNSSNSVSSERSASSVNAQESRGRGRGRGAKRTSV
PPPAASARSSTRRRTVAAGTSQHDDIAPQGALARSNSTNSLNSEISSCSLSSQIRGRGGR
QRGRGRKLEADSVPLISSPSNQSSTPKPAARGRKSRKAEESSIEIAVEDDKESQQASTTR
GRQRANANGSEAAAAEKEGPSNQDIAAGEESILLKRNVRGKGQKAAKSEPVEAPVAAAVS
NADETKRKGRKREMEVNTEDDSSSSSKMSKGKDRAPKTEPAAEEEANVETKDETPIKAKR
RGRASSAQGKKNAKDSPGKVEVGEESEKMEEGTFERKGRGRPSVVQKKKKEEQEESGSSA
DHDAHVEASEPKTPTSSASRKRQAPADSSPVAKTPRSSSASPAAAVRARAASQAYKVLFT
GVVDEAGERVLARLGGSMAKGVADMNCLVTDKVRRTVKFLCAVAKGVPIVTTHWLEKSGK
SGSFLPPKAFVVKDPEQEKKFSFCLQESLRTASSQPLLQGYEIHVTKSVKPEPVHMKDII
SCSGATFLPKMPSSQKPHTVVISCEEDLSLCGPALSASLPVVSAEFILTGILQQKLDLQT
HSLSAPASNLQAAGGRGRGRKKT
NT seq 6012 nt   +upstreamnt  +downstreamnt
atggatgctactcagatgatcaatgactcaatcttggagtcagaagatgaagaaaacgaa
gaggagaaaggaaataagagggggcgaccattggccaaactgtgcatcttaaaaaatgaa
cacatccctgagacagagttacccctctttttgggagacaacgtgctgggccgtgacccc
aacacatgcactttgcccttgcaagcaccctcagtatccaagcagcacgctaccatctgc
atctctgcctacaggagaaagggttgttttagtgaagtggacatagaggctttggtttgg
gacctaggaagcatgaatgggacccgcaagggtcgcttaaagctgactcctaatgtacgc
tatgcccttagtgaacaagacgctttggtggtggcagacatcccatgtcagtttgtcagt
tgtgcagtagatggagtctcttctcaaggagatgcaaggactccaatgagcagaaattct
gaggtaaaggccaggttgctagatgcctcgggagagaagactggtgatacaagcataagc
agcaagaaatgtgtcaatggaggtccaaaggcaagggtgtcattacctgatcttgaggac
actaagaagactcctgtcagatccagttgcctgtcctttgagcaaactccaacccagcca
caggggaccctagtcccagaatctgactcggattcagacggagaaagagggagagcggga
gagagaaggcgcaaggctctagtgtcaaattctgactcgtgtaaatccagtcccacctgt
tcaacattcttgagtcctgcaaacaaaatcgtcccagaaagcgaggatgaaagtcccatc
acaccgtcgtcctccactaagaataggccttacagacatgtcagctgcagcaaggaggag
acagacatagatatggggcgacagcagctgaaggaaataaaggcccttgcgattgtagat
gacagtgaagaggagggaggaagagaagaagaaagagcagcactagcagggagaaagtgt
gagaaaagtggacaacatgtgccagtgaaacaggacagaaatgtcagtcttacaggacaa
gatgatttgcctatattcacaccggctgttgtcacagatgtgatccctgcatttaacatg
gacagtgacacagatatggagggagaggaggaaggggtgccatctgagggtcctgtgacc
tcgaatacaaaccaacaagctgatcagccaccagaagcagcccagtttcacatggacagt
gatacagatgttgatgaggataatgacgctttagacaatggtcccaaatctgagccttcc
tccgctgagaccaaacctccccgtgttattccagttatccagccagagggcatcacaatg
gacagtgacactgatgttgatgatgatgatgctgctgtgtcagacactgctacaaaagca
gaacctgtgtctcgtctgagcacacacacagctgactctgctccgtcgactcagcctaaa
gatttccaccttgacagtgacacagatgttgacgaggaagaagaaaaggaaagcggaaca
aatactacaggctctaaaatagatgaaactcccccgagattagatatcaaaccaagtggg
cctgaatccaccccctctgctcatcagagctcacatccagacagtgacacagatgatgaa
gctactcctgcccctgccgtcagtgaaccctccgcggcgtctgctgtcacagaatcatgc
accacagcagacagaggagctgatttgggtattctgtctgacagtgacacagatgcggaa
gaccactctcctctggtcatacctgttgttatcacaaccctgtcagtttctcctgacagc
agatcagaagctcctcagccagattatgatgcagacacagatgtggatgaacccagcgtg
ccccctgctggggagggggttaatccagctgagcttgacgtgggcagtgacacagatgta
gaagatgaggaggtggattttgaagaggcaggtgagggccagattccaagcctgtgcaga
gaaaatacacctgggttgctggttcctcttctgcagaactgctctactcctgtgcagctc
tcagaaggacaagtggaagatatggagactcaggctttcctgagtccctcttcaggtcca
catagatgtgcagtcgcctcagctggaagacctaaaacattgtcctccttgtcagacagt
aacgaggatgaggactttgtcgtggcggagacgcaatccttcctcctccacaacagagac
tgccagggagaccgtgaagtggaccacgccacagagcccactcaagcttttggccttgat
tcgtctggtgatgataaagaagaacagtccatcagaggagggtctttccagctgggactg
tccgacagcagccacctgcagggtcaggctcaagctctggccatggagagcacccaggct
tttgtctctgtggaaggtggtgtgaccctggaagaaacccaagcatatgcaaccacctca
gatgcagacagacccttcttagagaatgaggaggccacacagaactatggagaggaggag
gaagattctgaatgttctgttacgtctgccaaagaaggtcaggtagatttggccctggaa
gctacacaggcttatatttcagaacccctctgtgattcagaggatgaaacagatgatgag
agacaaagccctgcttctgctgagactcaacctttagacctacccacctcatcctctctg
gccatggctgaaacccaactaatgtctgcctttgaggaagaggagacactcgatgaagaa
aacccagagagaggacaacgtggggaagcagctcaacctcaggagagacacgtcagcaaa
gctctgtctgtagctgaaactcagcccatgtgtacaagtgacaatgaggaaagtgataac
gatgaggaggactcgattgtaagctcacgagaaagaaaagcaaagccgctgcagcttgaa
gacgatcagacatcaacgcttacaaactctgacctctctgccgttgcaactcagccgatg
gctatgggtatagatgaagaaagcgacgaagaggactcatttccaggtccacgcagaaga
aaagcaaagaggctgcaaattcaagatgagtcgcaaaccacaaactctcagctctctgct
gttgaaactcagcccatggctacgggtatagatgaagaaagtgatgaagatgactcaatt
ccacgtcaatgcaaaagaaaagcaacaaggctgctgattcaggaagactcagagtcacaa
tccctcccgaattctggggcctccactattactcagcccttggaaacaaacgctggcttt
cagagaggaagggggaggcaatcaaaggctggaaccagtggcaacactgttagaggtaaa
agagaaacaaggtcaagattaagagaagaggaggagcaggaagagtgttctgaacttccc
aagagacagacgagagggaaaaatacagctttgccaactactaaagatgagagtgaggaa
gaagaggaggttgagcacactaagagaactagagggaaaaaatcaatgaggcaacagaaa
cataatgaggaagaaaggcttgaaatagaaagaaacaaaaaagaagaaaaattagaaagg
gaaagaaaagaaaaggaagaacaagaaggattgcaggctgaaaatgctgaaaggttaagg
cttgagcaagagagagaagacaaagagagaatggagagggaaaggaaggaacaagaggaa
aaggaaaaagccgaaagggctcaaaaggaaaaagaggaacaattggagagggaaagaaag
gggaaggaagaaaaagcgagattagagcttgaaagggcagaaaaggaagagaaggagaga
ttggaaagagaagagaaagagagagtagaaaaggaaagattggagacaacaaagaggaaa
ctagaagggagactggagagggagagtaaggaacaagaagagcaagcaagattagagaga
gaggcaaaggaagaaagagaaagattggaaaaagaaaaacaagacaaagagcaagaaaag
aaggaagaggaacaagagaacaagaccgaagctcctgcaagaagtcgaagagcatccaga
agaacaattgctgcctcatctacaacacaagacgcaaacaatgatgatgtgccggcaagg
agaaccagatctcgctccaactcttccaactctgtcagctcagagaggtctgcttcgagc
gtgaacgcccaggagagcagggggagaggccgagggagaggagccaagaggaccagtgtg
ccaccaccagcagctagtgccaggagcagcactagaaggaggacggtggctgcagggaca
tcacaacatgatgatattgctcctcagggagctctcgccaggtctaactccaccaactcc
ctcaactcagagatttccagctgcagcttgagctctcagatcagaggaagaggaggcagg
cagcgaggaagagggaggaaactagaagcagactctgtccctcttattagtagtccgagt
aatcagagttcaactcctaaacctgcagccagaggcaggaagagcaggaaagcagaggaa
tcttctattgagattgctgttgaagatgataaagagtctcagcaggctagtaccacaagg
gggcgacagcgagccaatgcaaatggctctgaagctgcagctgcagagaaagaaggccct
tcaaatcaggatattgctgcaggagaagaatcaattttgctcaaaaggaatgtcaggggc
aaaggtcaaaaagcagcaaagagtgagcctgtggaggcacctgttgctgctgcagtcagt
aatgcagatgagacaaaacgaaaagggaggaagagagaaatggaggtgaacacagaggat
gattccagcagcagctccaaaatgtctaaagggaaggatagagccccaaagacagagcca
gctgcagaagaagaagcaaatgttgaaacaaaagatgagactccaatcaaagctaaaaga
agaggtcgagcatccagcgctcaaggaaagaagaatgcaaaagattcccccggtaaagta
gaggtgggggaggagagtgaaaaaatggaggaggggacttttgaaaggaaaggcagaggt
cgtccatcagtggtccagaaaaagaagaaagaggagcaggaagagagtggatcatctgcg
gaccatgatgcacatgtggaggcatcagagcctaagactccaaccagcagtgcatcccgt
aagcgacaggctcctgcagactcttcacccgtagcaaagacccctcgctcctcatccgct
tccccggcagctgctgttcgagcccgagctgccagccaggcctacaaggtgctgttcaca
ggcgtggtggatgaagcaggggagagggtgttggctcgtttaggaggcagcatggctaaa
ggtgtggcagacatgaactgtttggtgaccgataaggtgcgcaggactgtcaagttcctg
tgtgcggtggctaaaggagtccccattgtcaccacacactggcttgaaaagagcggtaag
tccgggagcttcctgcctcctaaggcttttgttgtgaaggatccggagcaggagaagaag
ttcagcttctgtctgcaggagtctctgaggactgccagcagtcagcctctcttacaggga
tatgagatccatgtaacaaagtcagttaaaccagagccagttcatatgaaagacatcatc
tcctgcagtggcgctacctttcttcccaagatgccttcttctcaaaagcctcacactgtc
gtgatttcctgcgaggaggacttgtctctgtgtggcccggctctctccgcgtctctcccg
gtcgtctctgctgagttcattctcacagggatccttcagcagaagctcgaccttcagaca
cactcgctctctgctcctgcaagcaatctccaagctgcaggaggaagaggacggggcagg
aagaagacttag

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