Semicossyphus pulcher (California sheephead): 138584632
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Entry
138584632 CDS
T10596
Name
(RefSeq) paired amphipathic helix protein Sin3a-like isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
138584632
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spul03036
]
138584632
Chromosome and associated proteins [BR:
spul03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
138584632
REST complex
138584632
Heterochromatin formation proteins
Other heterochromatin formation proteins
138584632
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
138584632
NCBI-ProteinID:
XP_069513051
LinkDB
All DBs
Position
Unknown
AA seq
1296 aa
AA seq
DB search
MKRRVEDQEPIFAPQQQQPRRPPVQGIADSFQHRALAPAPTVIEAASDNMQPSTGIQYSL
PQGYQVPTMPQSTSGHGHGHNNTAPHVGPHAHSLAVQSQGPAVVQGHVHPPAPLTSTQGQ
QQFQRLKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVINRVSQLFKGH
PDLIMGFNTFLPPGYKIEVQTNDLVNVTTPGQIHYITPHGISVQNLPISGASSQPASHHQ
HQSLPQASPHTTTTTTATPPAPAQPAPNKTSKPVQSPAHTPTSQPNPSIPSYASPRSPTV
QSHTPVSSTPSGAPPLQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQR
NAKEAGGNYTPALTEQEVYTQVARLFKNQEDLLSEFGQFLPDANSSLLLGKTTPDRAESV
RNDHGGTVKRPLLNNKQRLSQNGLPIRRPGGVGATPPVKKKPKILGKDHGLTEVGKHSTS
TETMFFEKVKKALRSSEAYDNFLRCLHIFNQEVISRAELVQLVIPFLGKFPELFTWFKNF
LGYRESCHGESSHAESLPKERATEGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPL
CREVLNDTWVSFPSWSEDSTFVSSKKTQYEEHIYRCEDERFELDVVLEANLATIRALETV
QRRLSRMSAEEQLRFKLDNTMGGSSEVIHRKAIQRIYGDKAHDIIDGLKRNPAVSVPIVL
KRLKMKEEEWREAQRGFNKIWREQNEKYYLKSLDHQGINFKQNDTKVLRSKTLLNEIEML
YDDRQERASEETATPPPTGPHMTLTYEDSQILEDAAALIIHHVKRQVGIQKEDKYKIKQI
IHHFIPDLLFARRGELSDVEEEEDEEEEDMEMDQEGPKKHNGLPGSSPSKSKLLFSNTAA
QKLRGTDEAYNMFYVNNYWYIFLRLHHILCSRLLRIYGQAEKQIEEDTRERDWEREVLGL
KREKNENPAIQLKMKEPMDVDVEDYYSVFLEMVRNLLDGNMEPTQYEDSLREMFTIHAYI
AFTMDKLIQSIVRQLQHLVTDDVCARVTDMYLSESANKANGGTLSTQTSRATAEGAYQRK
AEQLMSDENCFKLMFVKSRGSVSLAMELLDTEEENSDEPAEAERWSDYVGRYLNSDSASP
ELREHLAQKPVFLPRNLRRIRKCQRGWEQLQQDRMNKGPSDKSQDGSSGLKMECMFKLNS
YKMVYVCKSEDYMYRHTALTRAHQSHERVHTRLHRRFQARLDSWAKEHVTSDMAADNRRW
LMGEEQDSLLPCTTTRCPEVLHYLNINKYRVKYRTL
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggcgtgtggaggaccaggaaccaatatttgcgccccagcaacagcaaccacgc
cgcccaccagttcaaggtattgcagacagcttccagcaccgggccctcgccccggccccg
actgtgatagaggcagcttcagacaacatgcagccatccactggaatccagtattctctc
ccccaaggctaccaggtgcctacaatgcctcagagcacaagtggacatggacacggacat
aacaataccgctcctcatgtcggtccccacgcacacagcctggcagttcagtcccagggc
ccggcagtggtccaaggacacgttcatccacccgcacccttgacttcaacccaaggacag
cagcagtttcagcggctgaaggttgaagatgctttgtcctatctggatcaagtgaagctg
cagtttgggaatcagccacaagtttataatgatttccttgatattatgaaagagttcaag
tcacagagcatagacacccctggagtcatcaaccgtgtgtcccagctcttcaagggccac
ccagacctcattatgggtttcaacactttcttgccacccggatataaaattgaggttcaa
accaacgatctagtcaatgtgaccacaccaggtcagatccactacatcacccctcatggg
atttctgttcagaacctccctataagtggagcatccagccaacctgcgagccaccaccag
caccagagtctgccacaggccagcccgcacactaccaccaccaccaccgccactccaccg
gcccctgcccaacctgctccaaataaaaccagcaagccagttcagtctccagctcacaca
ccaaccagccagcccaacccatccatcccatcctacgcctctccacgctcacctacggtt
cagtcccacactccagtgagcagcacgccgtccggtgcaccacctctccagaacaaccag
cctgtggagttcaaccacgctattaattatgtcaacaagatcaagaaccgtttccagggt
cagccggacatctacaaggccttcctggaaatcctgcacacataccagaaggaacaacga
aatgctaaagaggcgggcggtaactacaccccagcactgactgagcaggaggtctacact
caggtggcaagactcttcaagaaccaggaggaccttctgtcagagtttggacagttcctt
ccagatgcaaacagctcattgctgctgggaaagactacgccagacagagcagagtcggtt
cgtaatgatcatggcggcacagtaaagagacccttactgaacaacaaacagagactgagc
cagaacggcctgccaatcaggagacccggtggagtgggagccacaccacctgttaagaag
aaacccaaaatactggggaaggatcatggcttaactgaagtcggcaaacacagcaccagc
actgaaacgatgttctttgaaaaggtgaagaaggctcttcggagctctgaggcgtacgac
aacttcctgcgctgtcttcacattttcaaccaggaagtaatctcccgtgccgagctggtc
cagttagtcatcccatttcttggaaaattcccagagctttttacatggtttaaaaacttc
ctgggctaccgggagtcttgtcacggggagtcgagccacgcagagagtttaccaaaggag
cgtgcaacagagggcatcgccatggagatcgactacgcttcctgtaagaggctggggtcc
agctacagagcactgccgaagagctaccagcagcccaagtgcacaggaaggacgccgctg
tgcagagaggttctgaatgacacatgggtgtcatttccatcttggtctgaggattctaca
tttgtgagctccaaaaagactcaatacgaggagcacatatacagatgtgaggatgagcgc
tttgagctggatgttgtgttggaagccaacctggccacgatacgagctctggagactgtg
cagcgaaggctgtctcgcatgtcagctgaggagcagctgcgcttcaagctggacaacaca
atgggcggctcttcagaggtcattcaccgaaaagctatccagaggatatatggagacaag
gcccacgacatcatcgacgggctcaagaggaacccagctgtgtctgtccccatagtgctg
aaaagattaaaaatgaaggaggaggaatggagagaagcgcagagaggcttcaacaaaatc
tggcgggagcagaatgaaaagtattacctgaagtcactcgaccatcaaggcatcaacttc
aagcagaatgacaccaaagtgctgcgctccaagacgttactgaatgaaatagagatgcta
tatgatgaccgccaggagcgagcatcagaggaaactgccacacccccaccgactggccca
cacatgaccctgacctacgaggacagccagatcctggaggacgcggctgctctgatcatc
catcatgtcaaaagacaggtgggcatccagaaagaagacaagtacaagatcaagcagatc
atccaccacttcatccccgacctgctttttgcacggcgaggggagctgtctgatgtggag
gaagaggaagatgaggaggaagaagacatggagatggatcaagaaggccccaagaagcac
aacggcctgccaggcagcagcccatcaaagtccaagctcctcttcagcaacacggcagct
cagaagctgcggggcacagatgaggcctataacatgttctatgtgaacaactactggtat
atcttcctccgtcttcaccacatcctctgttctcgcttgcttcgaatctacgggcaagcc
gagaagcagattgaagaggatacccgagaacgagattgggaaagagaagtgttggggctc
aagagggagaaaaatgaaaatccagcaatccagctaaagatgaaggagccaatggatgtt
gacgtggaggactactactccgtgtttctggaaatggtgcgtaatcttctggatggaaac
atggagccaactcagtacgaggactcgctgagggaaatgtttactatccatgcctacatt
gccttcactatggacaaactcatccagagcattgtccggcagctccagcaccttgtcacc
gatgatgtctgtgcacgtgtaacggacatgtacctgagtgaaagtgccaataaagccaac
ggtggcacactgtccacgcagacatccagggccacagcagagggggcctaccagcgcaaa
gcagagcagctaatgtccgatgagaactgcttcaaattgatgtttgtaaagagccgaggg
tctgtcagtctggccatggagctgctggacacagaagaggagaactctgatgaaccagcg
gaggcagagaggtggtccgactatgtgggcagatacctgaactcagattctgcgtcccct
gagctgcgtgaacatctcgcccagaagccggtgttcctccccaggaatctgagacggata
aggaagtgccagagaggatgggagcaactgcagcaggaccggatgaataagggcccctcg
gacaagtcgcaggacggcagcagtgggctaaagatggagtgcatgttcaaactgaactcc
tacaagatggtttacgtctgcaagtcagaggattacatgtacaggcacacagcgctcaca
cgggctcatcagtcccacgagagggtccacactcgcctgcacagacgcttccaggcccgg
ctggactcctgggccaaagagcatgtgaccagtgacatggctgccgacaaccgcaggtgg
ctgatgggagaggaacaagacagcctgttgccctgcaccaccactcgctgccccgaggtc
ctccattatctcaacattaacaagtaccgggtgaagtacagaacactgtag
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integrated database retrieval system
