Semicossyphus pulcher (California sheephead): 138585061
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Entry
138585061 CDS
T10596
Symbol
dhx38
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03040
Spliceosome
Brite
Enzymes [BR:
spul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
138585061 (dhx38)
Spliceosome [BR:
spul03041
]
Complex C
Other components
Step II factors
138585061 (dhx38)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138585061
NCBI-ProteinID:
XP_069513398
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Position
Unknown
AA seq
1261 aa
AA seq
DB search
MDEDVSMHRLEGTDPTAQVGGLIVKKKSAAAEPHVFRAPTPRTSLLGLDLLAAQKRKERE
SKEQADGSGDEKNTKKSKVSSYKDWEEGKSDSGSDEEEEDDKNQDEKKESLSSRKYRVTG
SETPSNPGGVSEEFRRRHQQREKDRREHGVYASSKEDKNRERERSRDKGRDRRSERDERE
GSRSRGSSSSRAERSERGERSERSQREGWSADRISRGTKRDEPQSPQNRPRDSFTPSRSN
WEEDDSGYASSRHSQWESPSPALSHRESDRSERSHRSVRESERRDRSVRGRYPDDTPLPT
PSYKYNEWANDRKHLGSTPRLSQGKGRKEDGEGGIMFDNEDEKEQWQEDQKQADRDWYMM
DEGYDEFHNPFTTTSEEYVKKREQILQKQTQKRISAQKRQINEDNERWETNRMLTSGVVQ
RLEVDEDFEEDNAAKVHLLVHNLVPPFLDGRIVFTKQPEPIIPVKDATSDMAIISRKGSQ
LVRKHREQKERKKAQHKHWELAGTKLGDIMGIKKKEEADVSGGQPVGEDGKVDYRAEQKF
ADHMKEKTEASSEFAKKKTLLEQRQYLPIFAVRQQLLNIIRDNSIVIVVGETGSGKTTQL
TQYLHEDGYTSYGMVGCTQPRRVAAMSVAKRVSEEIGTNLGEEVGYAIRFEDCTSEKTLI
KYMTDGILLRESLRESDLDHYSAVIMDEAHERSLNTDVLFGLLREVVSRRTDLKLIVTSA
TMDSDKFAAFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQALQIHLSGLIGDILI
FMPGQEDIEVTSDQIIERLEDLENAPPLAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVAT
NIAETSLTVDGIMFVVDSGYCKLKVFNPRIGMDALQVYPISQANANQRSGRAGRTGPGQC
YRLYTQSAYKNEMLTTTIPEIQRTNLANVVLLLKSLGVQDLLLFHFMDPPPEDNMLNSMY
QLWILGALDNTGALTPTGRLMVEFPLDPALSKMLIVSCDMGCSADILIIVSMLSVPAIFY
RPKGREEESDQVREKFSVPESDHLTYLNVYMQWKNNNYSSVWCNEHFIHTKAMRKVREVR
SQLKDIMVQQRMNLISCGSDWDIIRKCICAAYFHQAAKLKGIGEYVNVRTGMPCHLHPTS
SLFGMGYTPDYIIYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSIKHAGRSRMENRRRA
KEEITNMEEEMSMAEEQLRARREEQDKKSNTGTVKGVKICTPGRKDEAPMTPRRTPARFG
L
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggatgtgtccatgcataggctggaagggactgatccaactgctcaagttggt
ggactgatagtaaagaaaaagagtgctgcagcagagccccatgtttttcgagcacccact
ccacgcacctccttgctaggcttggatctgcttgcagcccagaaaagaaaggaacgtgag
agtaaggaacaggctgatggtagcggggatgagaaaaatacaaagaagtcaaaggtttcc
tcctacaaggactgggaggaaggcaaaagtgactctgggtctgatgaagaagaagaagac
gataagaaccaagatgaaaagaaggagagtctttccagcaggaagtatcgtgtgactggt
tcggagactccttcaaaccctggaggggtcagtgaagagttccgacgcagacaccagcag
agagagaaagacagacgtgagcatggagtctacgcctcctccaaagaggacaagaacaga
gaaagagaaaggagcagggacaaaggaagagaccgaagaagtgaaagagatgagcgagag
ggcagccgtagccgcggcagcagcagcagccgggcggagcgttcggagcgaggtgagagg
agtgagcgctcacagagagagggctggtccgctgatcgcatcagccgggggactaagaga
gatgaaccccagtcaccacagaatcgccccagagattctttcacaccctcacgctccaac
tgggaagaggatgacagtgggtatgccagttcacggcactcccagtgggagtctccgtct
cctgccctgtcacacagagagtcagatcgctcggagagaagccatcgctctgtccgagag
agcgagaggagggacaggtcagtcagaggccgttaccctgacgacacacccctgcccacc
ccatcatacaagtacaacgagtgggcgaatgacagaaagcatttgggatctacacctcgc
ttatctcaaggaaaaggtaggaaagaagacggtgagggaggaattatgtttgataatgag
gacgagaaagaacagtggcaggaggatcagaagcaagctgacagagactggtacatgatg
gatgaaggctatgatgagttccacaaccctttcaccaccacctctgaagagtatgtcaag
aagagagagcagattcttcagaagcagactcaaaaaagaatttctgctcagaagcgacag
atcaatgaggataacgagcggtgggagacaaaccgtatgctcaccagtggtgtggtgcag
aggttggaggtggatgaggactttgaggaggacaatgctgccaaggttcacctgcttgtt
cataacctggttcctccctttctggatggaagaatagtcttcactaagcagccagagcct
atcattcctgtgaaggatgctacctctgacatggccatcatctctcgcaaaggcagccag
cttgtccgtaaacatcgtgagcagaaagaacgcaagaaggcacagcacaaacactgggaa
ctggcaggcactaagttgggggatatcatggggatcaagaagaaagaggaagcagacgtc
tctgggggccaaccggtcggtgaggacggcaaagtggactacagagcagagcagaagttt
gctgaccacatgaaagaaaagacggaggctagcagcgagtttgctaagaagaagactctt
ctggagcagaggcagtacctgcctattttcgctgtcagacaacaacttctaaacatcata
agggacaacagcattgtgattgttgttggagagacgggcagtgggaagaccacccagctg
actcagtacctgcatgaggacggctacacgagctacggcatggtgggttgtacgcagccc
cgaagagtggcagccatgagcgtggccaagagagtcagtgaagagattgggaccaacctc
ggagaagaggtgggctacgcaatccgttttgaggactgcacgtctgagaaaaccttgatt
aagtacatgacagacggtatcctgctcagggagtcactgagggagtcagacctggaccac
tacagtgctgttatcatggacgaggctcacgaacgctccctgaatactgacgtgttgttt
ggactgctccgtgaggttgtgtctcgccgaactgatctgaaactcatagttacttctgcg
actatggattcagacaagtttgctgcattttttggcaacgtacccatattccacattccg
ggaagaacgtttccagtagacatcttgtttagcaagactcctcaggaggactacgtggag
gcagcagtgaagcaggctctgcagatccacctcagcgggttgatcggagacatcctcatc
tttatgcctgggcaggaggacattgaggtgacgtctgatcagatcattgagcggttagag
gacttggagaatgctcctcctctggcagtgctgcccatctactcccagctgccttctgac
ctccaagcaaagatcttccagaaggctccagacggtgtgaggaaatgcattgttgctaca
aacatcgctgagacctctcttactgtggatggaatcatgtttgtcgtagattcaggatac
tgcaaactcaaggtgttcaatcctcgcattggaatggatgctctacaggtttatcccatc
agccaggccaatgccaaccagcgttctggccgagcaggacgtacaggaccagggcagtgt
tacaggctctacactcagagcgcctataagaacgagatgcttacaaccaccataccagag
atccagaggaccaacctggccaacgtggtcctgctgctgaagtctctgggtgttcaggat
ttgctcctgttccacttcatggatccacctccggaggacaacatgctcaactccatgtac
cagctctggatcctgggtgctttagacaacacaggtgctttgacaccaacaggacgtctg
atggtggagtttcccctcgaccccgccctctctaagatgctgattgtgtcctgcgacatg
ggctgcagtgctgacattcttattattgtgtccatgctgtctgtgccggccatcttctac
agacctaagggtcgagaggaggagagtgaccaggtgagggagaagttctcagtcccagag
agtgaccacctcacgtacctgaacgtctacatgcagtggaagaacaacaactactccagc
gtgtggtgcaacgagcacttcatccacactaaggccatgcgcaaggtgcgtgaggtgcgt
tcccagttaaaggacatcatggtgcagcagaggatgaacctgatttcctgcgggtcagac
tgggacatcatcagaaagtgcatctgtgctgcttacttccaccaggctgccaagctcaag
ggcatcggtgaatatgtgaacgtgaggacaggcatgccatgtcacctccatcctaccagc
tccctgtttggtatgggctacaccccggactacatcatttaccacgagctcgtcatgacc
accaaggagtacatgcagtgtgtgacggcagtggatggagagtggctggcagagctgggg
ccgatgttttacagcatcaaacatgcaggaagaagcagaatggagaaccgccggcgggcc
aaggaggagatcaccaacatggaggaggagatgtccatggctgaggagcagctgcgagcg
cgtcgagaggagcaggacaagaagagcaacactggcactgttaagggagtgaaaatctgc
acaccggggaggaaagacgaggcccccatgacacccagacgcaccccggctcgattcgga
ctgtag
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integrated database retrieval system
