Semicossyphus pulcher (California sheephead): 138585085
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Entry
138585085 CDS
T10596
Symbol
afdna
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul04520
Adherens junction
spul04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
138585085 (afdna)
04530 Tight junction
138585085 (afdna)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
PDZ_6
RA_2
RA_3
RASSF8-10_RA
PDZ_2
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
138585085
NCBI-ProteinID:
XP_069513420
LinkDB
All DBs
Position
Unknown
AA seq
1962 aa
AA seq
DB search
MTGSREEERRKLADIINHWNANRLDLFEISRPTEDLEFHGVMRFYFQDRVAGNFATKCIR
VSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERQLDLDEKPLVVQLNWNKD
DREGRFVLKNENDILPKKSQSNGPEKEKDGVIQNFKRTLSKKEKKKEKKREKEFARIPDG
DEQALNREDGENSRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEFMSSDGR
PDSGGTLRIYADSLKPNIPYKTILLSTRDTADFAVVEALEKYGLEKENPREYCIARQDDK
SGKEAILDDSECPLQIFRDWPADRGALVFQLKKRPPDYQGRKGRKMDDKGLRKEGSSSSL
PPEKLPYLVELSPGRGNHYAYYAYRHHEDGSDSRDKPKLYRLQHSITEVGSDCTEDGAIQ
LLGPGILPHHCNLMHTEGMVTVTPHGPDADTFVDGQRVTETTVLRSGSTIQFGSGHVFKF
VDPMFDQAAKREPAAMMRSRHKSGSVPETTFDLHGDVHSGAALPTSKSSGKLEMERGMVK
PMIRGEQQDSRSQDVSADRSELTLPAGIEFRDNSEDTFLSAIINYTNSSTVHFKLSPTYV
LYMACRYVLSPTYRPDMSPSERTHKVIAIVNKMVSMMEGVIQEIPEGDQKQKNIAGALAF
WMANASELLNFIKQDRDLNRVTLDAQDILAHLVQMAFKYLVHCLQADLNNYMPAFLDDPE
EHNPQRPKIEDVLHTLTGAMSLLRRCRVNAALTIQLFSQLFHFINMWLFNKLVTDTDSGL
CCHYWGAILRQQLSHIEAWAEKQGLELAADCHLSRIVQATTLLTMDKYSMQDVQNIHNTC
FKLNSLQLHALMTNYHCAPDEPYIPPELIDHVVAVAENTADELARSDGREVQLEEDPDLQ
LPFLLPEDGYSCDVVRSLPNGLQDFLEPLLQRGFCRLVPHPRSPGTWTVHFEGADCDSHF
SAADNSEMPMRKEPEVVTVTLKKHNGMGLSIVAAKGAGQEKLGIYIKSVVKGGAADVDGR
LAAGDQLLSVDGRSLVGLSQERAAELMTRTGSVVTLEVAKQGAIYHGLATLLNQPSPMMP
RASDRGRDKNGKLRPKSEGFELYNSSVQNGSPESPQAGWDSYPEPKKMSGEDRLLKNRAN
HRSSPNVANQGQSPAGKAVYPGGPGTKITSVSTGNLCADDEPSPPCPEAYPIPTQTYPRE
YFTIPASKSTDRVVGPGQGPPQHWQGMEDRERLPVVDNIHNSMQRVNHSQEDLYPPHGGM
RPDERMQQHYQQEYQHRDMDYQHRDLDYQRGPPGGVGGPDHWAPQPQVSSSLESSTSSQE
HLNFSASSSSSNKTQNQKTGPGRWKTPNAPHAVQPHPAQQPSRSDLPPPPPPPPAPYPDA
YDPYDPQPDLPLPPPPAAVSSVTAQQAADRKKREEQQRWYEKEKARLEEERERKRREQER
KLGQIRANPVMPVQPHNNGGAMPPPHHQPPLPSVTPPQPYLPPQPQPQLPPSRPEKLSSL
PRSAVPPPASASHPPGMDTVIRELLPQQQPRTIERRDLQYITISKEELSSDSLSPDPWKR
DAREKAEKQQQLHIVDLLDKEIQELQSKPERTAEESDRLRKLMLEWQFQKRLQESKQSDE
DEEEEDDEDVDTMMIMQRLEAEKRARQQNAVPAISVLDLLQDEERRRKQQLEEIRKREAE
ERVKQEEERRWREEERAKREAEEKRRQEEEYYTRLEAERRRQHEEAERKLLTPDEPAGLY
RPPLPRDYQPPAPHNPTNTPPPPPQRNTSYLKTQVTSPDTLYTAKFVSYAGDEEEDEDAG
SGGGGSQSGQVKLSATRKSYGDLPASASPNHGRPQPPPTARKPRPLSDGIFLSGSFQPPF
NNSNSTGPPLPAKPSSMPPGGFKGYNSYTGNSAGVVGSGEVYKDPRDKWTKSQEQENSNP
SGPPENLTFKERQRLFSQGKEVSNKVKASRKLMELENELNTK
NT seq
5889 nt
NT seq
+upstream
nt +downstream
nt
atgacggggagcagggaggaggagaggaggaaactggccgacatcatcaaccactggaac
gccaaccggctcgacctgttcgagatcagccggcccacagaggacttggagttccatggc
gtgatgcggttctacttccaggaccgggttgccggtaactttgccacaaagtgcatcaga
gtgtccagcacggcgacaacgcaggacgtcatcgagacgttagcggagaagttcaggccc
gacatgaggatgctctcctcgccaaaatactccctgtacgaggtccacgtcagtggcgaa
gagcgtcagctggacctggacgagaagcctcttgttgttcagctcaactggaacaaagac
gacagagaagggcgctttgtcctgaagaacgagaatgacatccttcccaagaagagtcag
agtaatggcccagagaaggagaaggacggagtgatccagaacttcaagagaactttgtcc
aagaaggagaagaagaaggaaaagaagagggagaaggagttcgcccggatccctgacgga
gacgagcaggcgctcaaccgggaggacggtgaaaacagtcgtctggcagcagaggtgtac
aaggacatgcctgagaccagctttacacggacaatctccaacccagaggtggtgatgaag
aggagacgccagcagaaactggagaaacgcatgcaggagttcatgagcagcgacgggagg
ccagactcaggaggcactttgcggatatacgccgacagtctgaagcccaacatcccgtat
aaaaccatcctgctctccacgagagacacggccgacttcgctgtggtggaggccctggag
aagtacgggctggagaaggagaaccccagagagtactgcatcgcacggcaagacgataag
tcgggcaaagaggcgattctggacgattctgagtgtccactgcagatcttcagggactgg
cctgcagacagaggagcgctcgtgttccagctgaagaagagacccccggactaccagggg
aggaagggaagaaaaatggacgacaagggcctgcggaaggaaggcagcagcagctcactg
ccgcctgagaaactgccttacctggtggagctgagcccagggcgagggaatcactatgcc
tactacgcctatcggcaccacgaagacgggtctgactcccgggacaaaccaaagctgtac
agacttcagcacagcatcactgaggtcggctcagactgcacagaggacggagcaatccag
ctgctaggcccggggattctgccccatcactgcaacctcatgcacactgaaggcatggtc
actgtgacgccgcacggccctgacgccgacaccttcgtcgacggacagcgagtcactgag
acaacggtgctgcgttcaggctccaccatccagtttggttctggtcacgtcttcaagttt
gtggaccccatgttcgaccaggcagcgaagagagagccggcggccatgatgaggagccgg
cacaagtctggcagcgtaccagaaaccaccttcgaccttcacggagacgtccacagtgga
gctgcccttcctaccagcaagagctcaggaaagctggagatggagagaggcatggtcaaa
cccatgatccgcggagagcagcaggacagcaggtctcaggacgtttcggcagacagatcc
gagctgactctaccggccggcatcgagttcagagacaactctgaagacaccttcctgtca
gccatcatcaactacaccaacagctccacggtccacttcaaactgtcacccacctacgtc
ctgtacatggcctgccgctacgtcctgtcaccgacttacagacctgacatgtcgccctcc
gagaggacgcacaaagtcatcgccatcgtcaacaagatggtgagcatgatggagggagtc
atccaggaaattcctgaaggggatcagaagcagaagaacatcgcaggagcgctggctttc
tggatggccaacgcctccgagctgctcaacttcatcaagcaggaccgagacctgaatcgc
gtcacgctggacgcccaggacatcctcgcccatctggttcagatggctttcaagtacctg
gtccactgtctgcaggctgatctgaacaactacatgcccgccttcctggacgacccagag
gaacataatccacagagacccaagatcgaggacgtcctgcacactctgacgggagcgatg
tcgttgctgcgtcgatgtcgtgtcaacgccgctctcaccatccagctcttctctcagctc
ttccacttcatcaacatgtggctcttcaacaagctggtgacggacacagactcggggctg
tgctgccactactggggggccatcctccggcagcagctcagccacatcgaggcctgggcc
gagaaacagggactggagctcgccgctgactgccacctcagtagaattgtacaggccacc
acgctgctgaccatggacaagtactcgatgcaggatgtgcagaacatccacaacacctgc
ttcaagctcaactccctgcagctccacgccctcatgaccaactaccactgtgctcctgac
gagccgtacatcccgcctgagctgatcgaccacgtggtggccgttgccgagaacacagca
gatgagctggcgaggagtgacggcagagaggtgcagctggaggaggatccagacctccag
ctgcccttcctgcttcctgaggacggctactcgtgtgacgtggtgcgaagcctccccaac
ggcctgcaggacttcctggagccgctgctgcagagaggcttttgtaggttagtaccccac
ccccgttctcctggtacctggaccgtccactttgagggagccgactgtgacagccacttc
tctgctgctgacaactctgagatgccaatgaggaaagagccggaggtggtcacagtaacc
ctgaagaagcacaacggcatgggcctcagcatcgtggctgccaagggtgctggtcaggag
aagctgggcatctacatcaagtctgtcgtcaaaggaggagcagctgatgtggacggccgt
ttggctgcaggtgaccagctgctgagcgtggacggacgcagtctggtcggcctgtcacaa
gagagggcggccgagctgatgacgaggacgggctcagtcgtgactctggaggtcgccaag
cagggagccatttaccacggcctggccacgctcctcaaccagcccagccctatgatgccc
agagcatcagaccgaggcagagacaagaacgggaagctgcgaccaaagagtgaaggcttc
gagctgtacaacagctcggtgcagaacggctcgccggagagtccgcaggccggctgggac
tcttaccccgaaccaaagaagatgagcggcgaagatcggctcctcaagaaccgagccaac
caccgctcaagccccaacgtagccaatcagggccagagtcctgcaggaaaagccgtgtac
cctggaggacctggcactaagatcacctccgtctccaccgggaacctgtgcgcagacgac
gagccctcccctccctgtccagaggcctaccccatccccacccagacataccccagggag
tacttcaccattccggcctcgaagagcacggatcgagtcgtcggccctgggcaggggccc
ccacagcactggcagggcatggaggacagagagcgcctccctgtggtcgacaacatccac
aacagcatgcagcgggttaaccactcgcaggaggacttgtaccccccacatggaggtatg
aggccagacgagcgcatgcagcagcactaccagcaggaataccagcaccgggacatggac
taccaacacagggatttggactaccagagaggtccaccaggaggtgtaggaggtcctgac
cactgggccccacagccgcaagtctcctcctcgttggagtcctccacgtccagccaggag
cacctcaacttctccgcctcctcttcctcctccaacaagacccagaaccagaagacgggg
ccgggccggtggaagacgcccaacgcccctcacgctgtgcagccacatccggcccagcag
ccatcccgctcagacctgccccctcccccgcctccaccgccagcaccttacccagacgcc
tacgacccctatgacccgcagccagacctaccgctgcccccgcctccggctgcagtctca
tctgtaacagcccagcaggcagctgaccgcaagaaacgtgaggagcagcagcgctggtat
gagaaggagaaggctcgactggaggaggagagggagaggaagaggagagagcaggagagg
aagctgggtcagatccgggccaaccccgtcatgcccgtccaacctcacaacaacggagga
gccatgccgcctcctcaccaccagccccctctgccctctgtgaccccaccccagccctac
ctccccccacagcctcagccccagcttcccccatccagaccggagaagctgtccagcctg
ccgcgctcagctgttcctccccctgccagtgcctcccaccctccgggtatggacacagtg
atcagggagctcctaccgcagcagcagccacgcaccatagagagacgagatctgcagtac
atcacgatcagtaaggaggagctgtccagcgacagtctgtctccagacccctggaaacga
gacgcccgggagaaggccgagaagcagcagcagcttcacatcgtcgacctgctcgacaag
gagatccaggagctccagtcaaagccggagagaacagcggaggagagcgaccgcctcagg
aagctgatgctggagtggcagttccagaaacggctgcaggagtccaagcagagcgacgaa
gacgaggaggaggaggacgacgaagacgtggacaccatgatgatcatgcagaggctggag
gccgagaagagagccaggcagcagaatgctgtcccagctatctctgttctagacttgttg
caggacgaggagcgacggcgtaagcagcagctggaggagattcgtaagcgggaggcggag
gagcgagtgaagcaggaggaggagaggaggtggagggaggaggagagagccaagcgagag
gccgaggagaagaggagacaggaggaggagtactacactcgcctggaggccgagcggcgc
cggcagcacgaggaggccgagagaaagctgctgacgcctgacgagccggccggtctgtat
cggcccccgctgccccgggactaccaaccccccgccccccacaaccctactaacaccccc
ccgccccccccacagagaaacacctcctacctcaaaacccaggtcacctcccccgacacg
ctctacaccgccaagttcgtctcctacgcgggcgacgaggaagaagatgaggacgcaggg
agtggcggcggcggcagccaatcaggtcaggtcaagctgtcggccacccggaagtcgtac
ggcgacctcccggcctccgcctcgcccaatcacggcaggcctcagccgccgcccactgcg
cgcaagccccgccctctttctgacggcatcttcctatctggctcgttccagccgccattc
aacaactccaacagtacaggtccccctcttcctgccaaacccagctccatgccccccgga
ggctttaaaggatataactcgtacactggaaactcagcaggagttgtaggatcaggagaa
gtctacaaggacccgcgagacaaatggacgaagagtcaggagcaggagaactcgaacccc
agcggccctccggaaaatctgaccttcaaggagcgccagcgtctcttctctcaggggaag
gaggtttccaacaaggtcaaagcttctcgcaaactcatggagctggagaacgagctcaac
accaagtag
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integrated database retrieval system
