Semicossyphus pulcher (California sheephead): 138585159
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Entry
138585159 CDS
T10596
Symbol
taf1b
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spul03021
]
138585159 (taf1b)
Transcription machinery [BR:
spul03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
138585159 (taf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
DUF5816
MXRA7_helical
Motif
Other DBs
NCBI-GeneID:
138585159
NCBI-ProteinID:
XP_069513536
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MDEEQTAGYREPCAQCSAVDWGVSEEGRFYCRSCHNVIERTREVVDPNFTPGSSRISTIG
RGTRTKRAERGRQWMICEGFQFILKNQADALLRLGVSPRVKDEVLCQLWRLYLQKSQQAF
THNPVRSSQFKLRRPGSDSESAAESSAVSDVETDGETNPPSTAGSNAESPSDWSVCSGSL
DAASYLSARLRRPRGLMSMKKTLALIHIALTWSREPLTLSDLLRLVSEGHVPYVNAYEEL
PEEMKLEGKDALIFRVESVPSHRAVHQEAHALVLLLRLPAFPPISRQSLLHPALLSLRYL
TDANLPDELHPWLCRLMERAGMADQTLHTVDRLSCPVLPRYDVQAAALVIVTMKLVFGLD
DHTEWDLSNEAGDQDDSGSMFSLRRWFRLLQAALTRAQHRREHDIARKQWRSKKPLYMNK
KDKYVVMKKRRIAEQLQLCFEKLSSRPAAAERVRPSSFRFCWGDEDGADGPSMHHKKLDG
VVTLKHNMQTPSNPTYWHPALRPCSSWKCRSHYSEVEATLPRMFVWVLQLFSFLLDVKPA
YLYEEVLMVERRVFSSKTPRRTRTKTRTRAESRTPQRERDTR
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagaacaaacggccggatacagggagccctgtgctcagtgttcggcggtggat
tggggagtttcagaagaaggtcgcttctactgcagatcctgccacaacgtcatcgagaga
accagagaggtggtggacccaaacttcacccccggctcctccaggatctccaccatcggc
agaggaaccagaaccaagagggccgagcgcgggcgtcagtggatgatctgtgagggtttc
cagttcatcctgaagaaccaggccgacgctctgctcaggctgggagtcagtcctcgagtc
aaggacgaggtgctgtgtcagctgtggagactgtacctgcagaagagtcagcaggccttc
acacacaacccagtgaggagctcccagtttaaactgaggcgtccgggctcagactctgaa
agtgctgccgagtcgtccgccgtgtcggacgtagagacagacggagagacgaacccgccc
agcaccgccggatcaaacgcagagagccccagtgattggtcggtgtgttcgggctcgctg
gacgccgcctcctacctgtcggcccggctgaggagaccccgcggcctgatgagcatgaag
aagactctcgctctgatccacatcgccctcacctggagccgcgagccgctgacgctcagc
gacctgctcaggttggtgagtgaaggtcacgtcccgtatgtgaacgcttacgaggaactt
cctgaagagatgaagctggaaggaaaagacgcgctcatcttcagagtcgagagcgtcccg
tctcaccgggcggtgcatcaggaggctcacgctctcgttctgctcctcagacttcctgct
tttcctccaatcagccgccagagtctgctgcaccccgccctgctcagcctgcgctacctg
accgacgctaatctgcccgacgagctccacccgtggctctgcaggctgatggagcgtgcc
ggcatggcggatcaaactctccacaccgtcgaccgtctgtcttgtcccgtcctgccgcgg
tacgacgtgcaggcggccgcgctcgtcatcgtcaccatgaagctggtgttcggcctggac
gaccacactgaatgggatttatcaaacgaggcgggcgatcaggatgactcaggaagcatg
ttcagcctgaggaggtggttcagactgctgcaggccgctctgactcgagctcagcacagg
agagagcacgacatcgccaggaaacagtggaggtcaaagaaacctctttacatgaacaag
aaggacaaatacgtcgtgatgaagaagagaagaatagcagagcagctgcagctctgtttt
gagaagctctcctctcgtccggcggctgcagagcgcgtccgtccgtccagcttcaggttc
tgttggggggatgaggacggagctgacggtcccagcatgcaccacaagaagctggatggc
gttgtgacactgaaacacaacatgcagaccccctctaacccgacatactggcacccagca
ctcagaccctgcagcagctggaagtgcaggagtcattactcggaggtggaggcaacgctg
cctcggatgtttgtgtgggtgctgcagctcttcagcttcctgctggacgtgaagccagcg
tacctgtatgaggaggtgctgatggtggagagacgagtgttcagcagcaaaacacctaga
cggaccagaaccaagacgaggaccagagctgagagcaggacgccacagagagaaagagac
acaagatga
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