Semicossyphus pulcher (California sheephead): 138585439
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Entry
138585439 CDS
T10596
Symbol
prpf39
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
Spliceosome [BR:
spul03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
138585439 (prpf39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_16
TPR_19
TPR_10
ARM_TT21_5th
TPR_12
Motif
Other DBs
NCBI-GeneID:
138585439
NCBI-ProteinID:
XP_069513866
LinkDB
All DBs
Position
Unknown
AA seq
797 aa
AA seq
DB search
MENTGLHLSDDTITGMLDTESPAMESNGDAFLPDLPVLGQAANWSMDQVAPEPLTSILPE
DSDASQDAPEQPQLPDQQMNATELGAVEKAVEQFKLASAQLFPEEQPPPPPPPPPQPTEE
PVQPPEQKEESGEAQLESDEMRIETEAAVPDASQDVTEAPQVTEDGMELEEQSKDTAEEP
TVPAEPELPSEFEKLLKGCEDNPEDFNGWVYLLQQVEQENVLSAVRKAFDVFFLRYPYCY
GYWKKYADIEKKHGNVQVAEEVYRRGLQAIPLSVDLWLHYLTFIKENSDAADPDTEGRIR
AAYEHAVLAAGTDFRSDRLWEAFVNWETEQEKLANVTAIYDRILGIPTQLYSQHFQRFKD
HVQSNNPKHFLSEEEFVQLRLELSKNSLSAMVSEDDETPAPQEDLPPGTEDLADPAKRVT
EIENMRHKVIEVRQEVFNHNEHEVSKRWTFEEGIKRPYFHVKALEKTQLNNWKEYLDFEI
ENGTPERVVVLFERCLIACALYEEFWTKYAKYLEGYSTDGVRHVYKKACTIHLPKKPATH
LLWAAFEEQQGSIDEARDILKSLEAAVPGLAMVRLRRVSLERRHGNLEEAEALLQEAMES
AKNATETSFYAVKLARQQMKVQRSLSKARKVLLDAIEKDQTSPKLYLNLLELEYSGDVTQ
NEAEILACFDRALQSPMPLESRLLFSQRKVEFLEDFGSDINVLVAANEEHQKLQKESEPA
KRKAENGYDSSQEPDAKRQRVEDGSSGAANAVTDTSANNSAYNYNWYQQQYGGWGQNSWG
QYNQYGQYNQYYPPPPT
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatactggcctacacctctcagacgacaccattactggaatgctggacactgag
tcccctgccatggagagcaatggggatgcctttcttcctgaccttcctgttctaggccaa
gctgcaaactggtccatggatcaggttgctccagaaccactcaccagcatcttgccagag
gactccgatgcatcccaggatgctccagagcaaccacagctaccggatcagcagatgaat
gccacagagctgggtgctgtagagaaggctgtggaacagtttaaactcgccagtgctcag
ctcttcccagaggagcagccaccaccaccaccacctcctccacctcagcccacagaggag
ccagtacagccaccagaacaaaaagaagagtccggggaggctcagttagagagtgacgaa
atgagaatagagacagaggctgctgtaccggatgccagtcaagatgtgactgaggcacca
caggtgacagaagatggcatggagcttgaagaacaatccaaagacacagctgaggaaccg
actgttcctgcagaaccagagctgcccagtgagtttgaaaagctcctcaaagggtgcgag
gataacccagaagacttcaacggatgggtctacctgctgcagcaagtagagcaagagaat
gtcctttcagctgtgagaaaagcatttgatgtattcttcctgcgctatccctactgctac
ggctactggaagaagtatgcggatattgagaaaaagcatggaaatgtacaggttgcagaa
gaggtgtacagaagaggcttgcaggcaatccctctcagtgtggacctgtggctgcactac
ctgaccttcatcaaagagaactcagacgctgctgacccggacacagagggacgcattaga
gctgcctacgaacatgcagtgctcgctgcaggcacagactttcgctctgaccgtctttgg
gaggccttcgtcaactgggagacagagcaggagaagctggctaacgtcaccgccatctat
gaccgcatcttgggcatcccgacccagctctattcccagcacttccagaggttcaaagat
catgtgcagagcaacaaccccaaacacttcctgtcagaagaggagtttgttcagctcagg
ctcgagctctctaaaaacagcctgtcggcgatggtcagcgaggatgacgagacaccagct
cctcaggaggacctgccgcctggtacagaggacctagcggatcctgctaagagggtgaca
gagattgagaacatgcgccacaaggttatcgaggtccggcaggaggtcttcaaccacaac
gaacatgaagtcagcaagcgctggacgtttgaagaagggatcaagagaccatacttccac
gtcaaagctttagagaagacccagctgaacaactggaaggagtacctggactttgaaatc
gaaaacgggaccccggagcgcgtggtcgtgctttttgagcggtgcctcatcgcctgtgcg
ctctacgaggagttctggaccaagtatgcaaaatatctagagggctacagcactgacggt
gtgagacatgtctacaagaaggcgtgtaccatccatctgcccaagaaaccagccacccac
ttgctgtgggctgcctttgaggagcagcaaggcagcatagacgaggctcgtgacatcctg
aagtccctggaggcggcagtcccaggcctggccatggtgcgccttcggagggtcagcctt
gagcgtcgccatggaaacttggaggaagcagaggccctgttacaggaagcgatggagtct
gcgaagaatgctactgagacatctttctatgctgtgaagctggccaggcagcagatgaag
gtgcagagaagtctgagcaaggccaggaaggtgctgctcgatgctattgaaaaagaccag
acgagtccaaagttgtatctgaacctgctggagctggagtacagcggcgacgtgacacag
aatgaggctgagatcttggcttgtttcgaccgagccctgcagagcccgatgccccttgaa
tctcgcctcctcttcagccagcgcaaagtggagttcctcgaggactttggcagtgacata
aatgtgcttgtggctgcaaatgaggaacatcagaaactccagaaagaaagcgaacccgcc
aagaggaaggccgagaacgggtatgacagctcccaggaacctgatgctaagaggcagcgt
gttgaggacggctcctctggtgcagccaacgcagtgacggacacttcggcaaacaactcg
gcatacaactacaactggtaccagcagcaatatggcggttggggacaaaactcctggggg
cagtacaatcaatacggccagtataaccagtactacccgcctcctcctacataa
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integrated database retrieval system
