Semicossyphus pulcher (California sheephead): 138585445
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Entry
138585445 CDS
T10596
Symbol
vps18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul04140
Autophagy - animal
spul04142
Lysosome biogenesis
spul04145
Phagocytosis
spul04148
Efferocytosis
spul05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
138585445 (vps18)
04142 Lysosome biogenesis
138585445 (vps18)
04140 Autophagy - animal
138585445 (vps18)
04148 Efferocytosis
138585445 (vps18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
138585445 (vps18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spul04131
]
138585445 (vps18)
Membrane trafficking [BR:
spul04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
138585445 (vps18)
Hops complex
138585445 (vps18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
Clathrin
aq_1631
zf-RING_Vps41
zf-RING_11
zf-RING_16
zf-C3HC4_2
zf_RING_Vps8
DUF1664
zf-RING_UBOX
zf-ANAPC11
zf-RING_2
zf-RING_5
DUF5600
Apolipoprotein
zf-rbx1
DUF2175
zf-C3H2C3
DUF4446
KNOX2
Sec8_N
LETM1_C
RBSN_mid
Motif
Other DBs
NCBI-GeneID:
138585445
NCBI-ProteinID:
XP_069513879
LinkDB
All DBs
Position
Unknown
AA seq
981 aa
AA seq
DB search
MASILDEYEDSQNSQIAQQHSRLSSANIGLTHSGFVNVRLEEEKPIFNKQRIDFTPPEKI
NHLAVCNNQLCMSLGKDTLLRIDLAKPDQLNQTELGRKDDSKVHKLFLDPTGSHLLISLS
TSECLYLNRNTQKVRSLSRWRGHLIESVGWNKLLGNETNTGPILVGTSQGIIFEAEISAT
EGSLFNTNPDQFFRQVHSLEEDGKPAPVCCLEVERGLENKYFIIATTRKRLFQFVGKVAE
GTEQQGFSSIFSQNQDLLPSFQEFPANMGYSEITFYTSKLRTSPKAFAWMMGNGVLYGQL
DYIRLDSLLSDVQVWEYTPDIDLSVNKPISIVLTQFHFLLLLHDRVKAICTLNGQVVYED
VFPDKFGTLKRMIKDPIGGLVWIYTERAVFRYHVQREARDVWQMYMSMTKFDLAKEYCRD
RPECMDMVLAKEAEHCFQNKRYIESAKCYALTQNYFEEIALKFIEAKQEEALKEFLLKKL
NNLKQSERTQITLLVTWLAELYLNRLGQLESDGNILIFQETREEFRRFLSNSKHKDCLYN
NRSTIYDLLASHGNVDDMVYFSVVMQDYERVISHYCQHDDYSAALEVLSKHCDQKLFYKF
SPVLMQHIPKKVVDAWIQMGKRLDPKKLIPALMNYSQMGSTQQINETIRYMEFCVYELTV
TEEAIHNYLLSLYAKYKPDSLLWYLEQAGTHASEIHYDLKYALRLCAENGYLRACVLVYR
IMELYEEAVDLALQVDVDLAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMNCLS
SCNLLKIEDILPFFPDFVTIDHFKEAICSSLEEYNQHIEELKQEMEEATESAKRIREDIQ
EMRNKYGVVDSQEKCASCDFPLLNRPFYLFLCGHMFHYDCLFQEVTPHLSVYKQSRLEEL
QKKLASTTQSSKSRSRLLPKDEGDTSSLGKGNAGTSREQIKSDIDDIIASECVYCGELMI
KSIDKPFIDPQKFEEEKSSWL
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaattcttgacgagtacgaggactcgcaaaactcgcaaattgcgcagcagcac
agccgcttgtcatctgccaacatcgggctgacacattcaggctttgtgaacgtgaggctg
gaggaagagaagccgatattcaacaagcagaggatcgattttaccccgcctgagaagata
aaccatcttgcagtctgcaacaatcagctatgcatgagtctgggaaaggacaccctgttg
aggattgatttagccaagcctgatcagcttaatcagactgaattaggaaggaaagatgac
agtaaagttcacaaactgttcctggaccctactggctcccatctgctgatcagcctgagc
accagtgagtgtctctacctcaacaggaacacgcagaaggtgcgcagtctgtcccgctgg
agaggccacctcatcgagagcgtaggctggaacaagctgctgggcaacgagaccaacacg
ggacccatcctggtcggcaccagtcaaggcatcatctttgaggctgagatctctgcgact
gagggcagcctgttcaacaccaacccagatcaattcttcagacaggtccactccctggag
gaggacgggaagcctgcaccagtctgctgcctagaggtggagcgaggcctggagaacaag
tatttcatcatcgccaccacccgcaaacgcctgttccagtttgtggggaaggtggccgag
gggacggagcagcagggcttcagctccatcttcagccagaaccaggacctgctgccaagt
ttccaggagttcccggccaacatgggctacagcgagatcaccttctacacctcaaagctt
cgcacctcccctaaggcgttcgcctggatgatgggaaatggagttctgtacggtcagctg
gactacatcaggcttgattcccttctgagtgatgtgcaggtatgggagtacacgccagac
attgatcttagtgtcaacaagcccatctccattgttttgactcagtttcacttcctgctg
ctgcttcatgaccgagttaaggccatctgcaccctgaacgggcaggtggtctatgaggat
gtgttcccagataaatttggaacgctcaagaggatgatcaaagacccaatcggtggtttg
gtgtggatctacactgagcgggctgttttcaggtaccacgtccagcgcgaggccagagat
gtctggcagatgtacatgagcatgactaaattcgatctggccaaggagtactgccgcgac
cggcccgagtgcatggacatggtgctggcgaaggaggccgagcactgcttccagaacaag
cgctacatcgagagcgctaagtgctacgcgctgacacagaactactttgaagagatagcg
cttaagttcatcgaagccaaacaagaggaagccctgaaggagttcttactgaagaagctg
aataatttaaaacagagtgaaagaacgcagatcaccctgctggtcacctggctagccgag
ctctacttgaaccggctcggccagctggagagcgacggtaacatcctcatcttccaggag
acacgcgaggagtttcgccgcttcctcagcaactccaaacacaaggactgcctctacaac
aaccgcagcaccatctacgacctgctggccagccacggcaatgtggacgacatggtttac
ttctcagtcgtcatgcaggactacgagagagtcatatcgcactactgccaacatgacgac
tacagtgccgctctggaggtcctctcaaagcactgcgatcagaagctcttttacaagttc
agcccagtcctcatgcagcacattcccaaaaaagttgtagacgcgtggattcagatgggc
aagcggctggacccaaagaagctcatcccggctctgatgaactacagccagatgggcagc
acccagcagatcaacgaaaccatccgctacatggagttctgtgtgtacgagctgactgtg
acggaggaggccatccacaactacctgctgtcgctctatgccaagtacaagccggactct
ctgctgtggtacctggagcaggcagggacacacgcctccgagatccactatgacctgaag
tacgccctcaggctgtgtgcagaaaatggctacctccgcgcgtgtgtcctggtttatagg
attatggagctgtatgaggaggcagtggatctcgctttacaagtagatgtagacttggcc
aaatcatgtgcagacctgcctgaggatgacgaggagctgaggaagaagctttggctgaag
atcgcccggcatgtggtgcaggaagagaaggatgtgaagaaagccatgaactgtctgtcc
agctgcaacctgctgaagattgaagacatcctgccattcttcccagactttgtaaccatt
gaccattttaaggaggccatctgcagctccctagaagagtacaaccagcacatcgaggag
ctgaagcaggaaatggaggaggccacagagagtgctaaacgcatcagagaagacatccag
gaaatgaggaacaaatatggtgttgtggattcccaagaaaagtgtgcttcttgtgacttt
ccattacttaacaggcccttctatctgttcctgtgtggacacatgttccactatgactgt
ctcttccaggaagtgacccctcacctgtcggtctacaaacagagccgtctggaggagctg
cagaaaaagctggcttcaaccacccagtcatccaagtcacgcagccgcctgctgcccaag
gacgagggagacacatccagcctggggaagggcaatgcaggcacaagccgcgagcagata
aaatcagacattgatgacatcatagcatccgaatgcgtttactgcggtgaactgatgatc
aagtccatcgacaagcctttcattgacccacagaaatttgaggaggaaaaatccagctgg
ctatga
DBGET
integrated database retrieval system
