Semicossyphus pulcher (California sheephead): 138588296
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Entry
138588296 CDS
T10596
Symbol
vps8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
138588296 (vps8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spul04131
]
138588296 (vps8)
Membrane trafficking [BR:
spul04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
138588296 (vps8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
TPR_Vps41
Clathrin
Beta-prop_WDR36-Utp21_1st
TPR_VPS8_2
WD40_CDC20-Fz
zf-RING_Vps41
zf-RING_UBOX
zf-RING_11
VPS18_solenoid_2nd
zf_RING_Vps8_fungal
Beta-prop_WDR5
zf-RING_2
Beta-prop_IFT122_1st
Beta-prop_THOC3
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_WDR3_1st
EIF3I
zf-RING_5
WDR55
Beta-prop_NOL10_N
zf-rbx1
zf-C3HC4
PHD_4
Motif
Other DBs
NCBI-GeneID:
138588296
NCBI-ProteinID:
XP_069514429
LinkDB
All DBs
Position
Unknown
AA seq
1404 aa
AA seq
DB search
MSESPDAGSLLSASSQLNLMEVDAIDDKEFDIPQVDTPPTLESILNEIEDEEAPFVLEDT
CVLNTDNIDAYSCDTSSLASSDSGDPAHLKRKRRTLDINATAHGSVVRQSLLKGISAQIV
SAADKVDAGLPTAITVSGVIAVGTSHGLALVFDTNQALRLCLGTKATGAEFGAVSALSIN
HDCSRLLCGFAKGQITMWDLANGKLLRTINDAHPPGTAILHVKFTDDPTLALCNDSGGSV
FELVFRRVMGMRSCDSRCLFSGSKGEVCCIEPLRAPPDFRDHPITLYSLLAMASLTKILV
IGLKPSLKVWMTFPYSKSDPSSVPQLAWQFVPVQKTVNPILAFCKGDTVHFLLVKKEETG
NIHVIKQRQLHLTCDIISLSWINSRTVVLVDSHEKLQVVDRPSQEVLETLDLEQVQLVYN
SRHFKSLATGGNVSQALALVGEKACYQSVSSYAGQIVYLGTKSVHIMALRNWRERIDCLL
KQEHFVDALSLAWSFHEGTAKAVVGLFGDPVKRKGLVADKMVEVFFQFAEHALKKCPEQG
KIQAVEQHFQDVVPVLVEYCLLLQRADLLFNHLYAQLAENMVAKGVFLESLESYIVADRL
GHLTTPIMRDLLAHYQSTGKMDSLERCIVHLDVTNLDIQQVVHVCWENQLHDAMIYVFNS
GMNDYITPMEKLLAVIGPPLRYGRSLTDEEVVMGNKLLVYISCCLAGRAYPLGDIPEDLV
VQVKNQVFEFLIRLHSADSSEEEEVFPFIRSLLHFDTREFLNVLAMTFEDFKNDKQALEY
QQRIVDILLQVMVDNSDFSLSQVGGLFTFLARQLAKPDNTLFVNRKLFDQVLDFLCCPDD
DSRHTERQQVLLELLQVGGVIQYNEGRLLALAEKAKFYQICEFLYEKNNLYDRIIDCYLR
DPLRKGEIFSYIHNLLSMPGYSHKEKQTVMEKVLQHIQELVTLDASNSADLVLLHFTDEV
QQIISELQDDQLLMKFLSCLLEPREGHHSGTVLPMEHDLHERLLDLFCRFSPQQTISFLQ
TSQHYRLEIAIQITEKYHHNEALAYLMEKRGDFQGAFAILLETLKEKLSLLTSEPDSGVE
RDESLDEEEGDSVSTVTRVKDSLNSIIDLCHRSSENLDQQQRESLWFPLLETMMASQKEV
KGLGSMQTFEVLRELTMKVLNCMSSFISLPAIIQRILQDPVYGTGKLAEIQSLILGMLDT
FNYEQTLLETTTSLLNHDLHWSLAHLHAAVTKGLHPRQDYCYICLQQYKRRQDSVDEIIV
FSCGHLYHFQCLLQKDCGWGIASELQQQWSCYKCSSSQGGRSGPSIEPKRLRSTSLAQTC
VSSVHRDTGAEAHGKKVFVEATLNLQQEQSWDRLRSLYRGPSRLSILSELSTCHSNEKTG
LMILGQPHTENFQLKLSPPPLLEE
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagtctccggacgcaggaagcctgctctctgcttcctctcagctcaacctgatg
gaggtggacgcgatcgacgataaggagtttgacattccccaagtggacacacctcccaca
ctagaaagcatccttaatgagatagaggatgaggaagcaccatttgtattggaagacacc
tgtgtactaaacacggacaacattgatgcctattcctgtgacacgtcctctctcgccagc
tcggacagtggagacccagcacacctcaaacgaaaaaggaggacattggatataaatgca
acagcccatgggtctgttgttcgacaaagtctgctgaagggcatctctgcacagattgtc
tccgctgcggacaaggttgatgctggactgccaactgctataacagtgtctggtgtgatt
gcagtgggaacgtctcatggtctggctctggtctttgataccaatcaggctctgcggctc
tgtctgggtaccaaggcaactggagcagagtttggagctgtctctgcactcagcatcaac
catgattgctcaagacttctctgtgggtttgccaaaggacagattacgatgtgggatcta
gccaatgggaagctgctgagaactattaatgatgcccaccctccaggaacagctatacta
cacgtgaagttcacagatgacccaactctcgccctgtgcaatgacagtggaggatcagtt
tttgagctggttttcaggagggtgatggggatgcgttcctgtgactctcgctgtcttttc
agtggttccaaaggggaggtctgctgtattgaaccgttgcgtgctcctccagacttcaga
gaccatccaatcacactctactctctgttggctatggcttctctcactaagattttggtt
attggacttaagccttcactgaaagtctggatgacttttccatacagcaagtcggatcca
tccagtgttcctcagctggcctggcagtttgttcctgttcagaagacggtcaaccctata
ctggctttttgcaaaggagacacagtccacttccttctggttaagaaagaggagacgggg
aacatccatgtcatcaaacaaagacaactccacctcacctgtgacatcataagcttaagt
tggatcaacagtcgcacagtggtcttggtagacagccatgaaaagctgcaggttgtggac
cggcccagtcaggaggttttggagactctggatttagagcaggtgcaactggtctataac
agccgacatttcaaatcgctagccactggagggaacgtctcccaggctctggctttagtt
ggagaaaaggcctgctaccagtcagtctcaagctacgctgggcagattgtctatttgggc
accaagtcggttcacattatggctctaaggaactggagagagcgtatagactgtctgcta
aagcaggagcattttgttgatgctctctctctggcctggtccttccatgagggaactgct
aaggctgtggttggcctgtttggagatccagtaaaaaggaaaggattggtagctgataag
atggtagaggtttttttccagtttgcagagcatgctttaaagaagtgtccggaacaaggc
aagatccaagcggttgagcaacattttcaagatgtggttccagtcctggtggaatactgc
ctgctgctacagagggcggacctgctgttcaatcacctgtatgctcagctggcggagaac
atggttgccaagggggtctttctggagtcactggagtcatatattgttgctgaccgcctt
ggtcacctcaccacgcccatcatgcgggacctcctggcccattaccaaagcactggtaaa
atggacagcttggagagatgcattgtccatctggatgtcaccaacctggatatacaacag
gtggttcacgtttgttgggaaaaccaactgcatgatgcgatgatctatgttttcaacagc
ggtatgaatgactacattacacctatggagaaactccttgcagttattggcccaccactg
aggtatgggaggagcttaacagatgaggaagtggtgatggggaacaaacttctggtgtac
ataagttgctgtcttgcgggacgggcatatccactaggagacattcctgaagaccttgtg
gttcaagtcaagaatcaggtgtttgagttccttatacgtctccattcagctgactcgtca
gaggaggaggaggttttcccttttatccgttcactcctccactttgatacccgagagttc
ctcaatgtcctcgccatgacatttgaagactttaagaatgacaagcaggccctagaatac
cagcagaggatagtggacatcttgcttcaggtgatggtggacaactcagactttagtctt
tcccaggtcggagggctcttcaccttcttggctcgccagttggccaaaccagacaacaca
ctttttgtgaacaggaaactctttgatcaggttctggacttcctttgttgcccagatgat
gactcccgccatactgagaggcagcaggttctgctggagttgcttcaggttgggggtgtc
atccagtataatgagggaagactgctggctttagcggaaaaggccaaattctatcaaatc
tgtgaatttctatacgagaagaacaatttgtatgacaggattattgactgctacctaaga
gaccccctcagaaagggggagatcttcagctacatccacaatctgctgtccatgcccggc
tacagccataaagagaaacaaactgtcatggaaaaagtattgcaacacatacaggagttg
gttacccttgatgccagcaattcagctgacctagtcttgttgcactttactgatgaggtg
cagcaaatcatctctgagcttcaggatgatcagttacttatgaagttccttagctgtctc
ctggagccaagggaaggtcatcattcagggaccgtcctgccaatggaacatgatcttcat
gagcgtctgctcgacttattctgccgcttttcccctcagcagaccataagcttcctccag
acctcccagcactacagactggagatagccatacaaatcacagagaagtaccaccacaat
gaggctttagcctatctgatggaaaaaaggggagattttcaaggagcttttgctatctta
ttggagacattgaaagaaaaactgagtctcctcacttctgagccggacagtggagttgaa
agagatgaaagtctggatgaagaggagggagacagtgtatccacagtgacaagagtaaag
gattcactgaatagcatcattgacttgtgtcatcgcagctctgagaacctcgatcagcaa
caaagagagtccctgtggtttccacttctggagacaatgatggcttctcaaaaagaagtg
aaggggcttggttccatgcagacatttgaagtgctgagggagctgacaatgaaggttctt
aattgtatgagcagctttatttctcttccggccatcatccaacggatacttcaggaccct
gtctatgggacagggaagctggcagagatccaaagcctcattctgggtatgctggacact
tttaactacgaacagactttacttgaaacaaccaccagtctgttgaaccacgacctccat
tggtccctggctcatctgcatgctgcagtcactaaaggactccatccacgacaggactac
tgttacatttgcctccagcagtacaagaggaggcaggactcagttgatgagatcattgtg
ttcagctgtggccacctgtaccacttccagtgcctgctgcagaaggactgtggttggggc
attgcttcagaactgcaacagcagtggagctgctacaaatgttcctccagccaaggagga
aggagtgggccttccatcgaaccaaaaagacttcgtagcacatcccttgcacagacttgt
gtttcatcagtacatcgtgatacaggagcagaggctcacgggaaaaaggtgtttgttgag
gccacgttgaaccttcagcaggaacagtcctgggatcggttacgcagtttgtaccgagga
ccatccaggttgtccatcctttcagaactctccacctgccacagcaatgagaagacaggg
ctcatgatcctaggccaaccacacactgagaatttccaacttaagctctctcccccacct
ctgttagaagagtag
DBGET
integrated database retrieval system
