Semicossyphus pulcher (California sheephead): 138588350
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Entry
138588350 CDS
T10596
Name
(RefSeq) spastin-like isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spul04131
]
138588350
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
spul04812
]
138588350
Enzymes [BR:
spul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
138588350
Membrane trafficking [BR:
spul04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
138588350
Cytoskeleton proteins [BR:
spul04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
138588350
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
AAA_22
AAA_5
TIP49
MIT
AAA_16
Mg_chelatase
AAA_14
IstB_IS21
AAA_24
NPHP3_N
DUF815
AAA_2
nSTAND3
AAA_33
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
138588350
NCBI-ProteinID:
XP_069514518
LinkDB
All DBs
Position
Unknown
AA seq
473 aa
AA seq
DB search
MNAIKSKDSGEVIKNYHKQAFEYVSKALRIDEDDTGDKEQAVQWYKKGIAELERGIAVEI
TGQAGDHYDRAKRLQDKMEANLTMAKDRLALLEATLASRRRSGPQRSASLTQPKPAPKSQ
PAVRGVSTNIRPSSAVRPPSRPADSKVTPRFGKAQNGKPAAVRQPLKRDMKNFKNVDSKL
ANLILNEIVDNGASVSFEDIAGQQLAKQALQEIVILPALRPELFTGLRAPARGLLLFGPP
GNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSVIFIDEVD
SLLCERREGEHEASRRLKTEFLLEFDGVQSGGDDRVLVMGATNRPQELDEAVLRRFAKRV
YVTLPDEETRFMLLKNLLGKQGNPLSSNELSSLAKATAGYSGSDLTSLAKDAALGPIREL
GPDQVRRMSASEMRNIKKKDFEDSLKRIKPSVSPSTLTMYTKWNKDFGDTTAF
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcaattaaaagcaaagacagcggggaagttattaaaaactaccacaaacaggcc
tttgaatatgtatctaaggccttaaggatcgatgaggatgatacaggagacaaggagcag
gctgtgcaatggtacaagaaagggattgctgagcttgaaaggggtattgccgtagagatc
acaggacaagcaggggatcactatgaccgagcaaagcgacttcaagataaaatggaagca
aatctcaccatggcaaaagataggcttgccctcttggaggccacattggcttctagaagg
agaagtggtccccagaggagtgcaagtcttacacaaccaaagcctgcgccgaaaagccag
cctgcagtgcgaggtgtgtccacaaacatcaggccatcctctgctgtcagacccccatct
agacctgcagattcaaaggtgaccccacggtttggaaaagctcaaaatggaaaacctgca
gccgtgagacagcctctgaagagggacatgaaaaacttcaagaatgtggacagcaaactg
gccaacttgattctgaatgaaattgttgacaacggggcatctgtatccttcgaagacatt
gcgggacagcagctggccaagcaagcgctccaagagatcgtcatcctccctgccttaaga
cccgagctctttactggcctgagagctccggcacgcggcctgcttttatttggcccgcct
ggaaatggaaaaactatgcttgccaaagcagtcgcagccgagtcaaatgcaacattcttc
aacatcagcgctgcaagtttgacctctaaatatgtgggagagggcgagaaacttgtacga
gcactgtttgcagttgccagagaattacagccgtctgtcatcttcatcgatgaagtagac
agtttgctctgtgaaaggagggagggagaacatgaagcctctcgtcgattaaaaacggag
ttcctgcttgagtttgacggggtgcagtcaggaggggacgacagggtgctcgtaatggga
gcgacgaacaggcctcaggagctcgatgaagcggtgctgaggcgctttgcaaaaagggtt
tatgtgacactgccggatgaggagacaaggttcatgctgctgaaaaaccttctggggaaa
cagggaaatccactgagttcgaacgagctgtcctctcttgcaaaagcgactgcaggatat
tcaggaagtgatctcacgtcattagccaaagatgcagcactcggaccgatcagggagttg
ggaccagaccaagtccgaagaatgtctgctagcgagatgcgtaacatcaagaagaaagac
tttgaagattccctgaagcgcattaagcccagcgtcagcccgagcactctcaccatgtac
accaaatggaacaaagactttggtgacacaacagctttttga
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