Semicossyphus pulcher (California sheephead): 138588744
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Entry
138588744 CDS
T10596
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2 isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
138588744 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spul03021
]
138588744 (polr1b)
Enzymes [BR:
spul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
138588744 (polr1b)
Transcription machinery [BR:
spul03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
138588744 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
138588744
NCBI-ProteinID:
XP_069515094
LinkDB
All DBs
Position
Unknown
AA seq
1134 aa
AA seq
DB search
MDFSTKWTNLPSGPSLKNLTRAGFGALKEDQHAAVQDLTRAHIESFDQAVSDGLSRVVQS
IPPLEFSFRNEQISLAFVEATIFSPLVAKGSICREMKVFPAECRGRRCSYRGKLVADVSW
SVNGVPKGIIKQSLGQLPIMVKSKLCNLHGLSPRELVEHHEEAQEMGGYFIVNGIEKVIR
MLIMPRRNYPIAMSRPKWRSRGQGYTQYGISMRCVKEEHMAINMNLHYLENGTVMLNFIY
QKELFFLPLGFALKALVELSDLEVQQELMKGLEENSFFRSCVCEMLRVVMEEGCSTRSST
LNYLGERFRVKMSLPEWFTNEQCAHFLLDECILIHLRSDVEKFHLLCLMTRKLFSFAKQE
CLEENPDSIMCQEVLTPGQLYLMFLKERLSAWLVSVKLSFEKRGSRLSGGWSAENVMKIF
NMGSDLTKPFEYLMATGNLNSRTGLGMLQNTGLCVVADKLNFIRYLSHFRCVHRGAAFAK
MRTTTVRKLLPESWGFLCPVHTPDGEPCGLMNHMTASCEIVTQSLSTVSLPTLLCSLGVT
PVDGSPGQAISDCYPVVLDGAMVGWVETELAPAVVNSLRRFKVLREKKMPPWTEIVLVPK
TGKASLYPGLFLFTTPCRMVRPVRNLSLGRQELIGTFEQLYINVGVMEDEVEPRVTSHQE
LFPHSMLSVVANFIPYSDHNQSPRNMYQCQMGKQTMGFPLHSFTDRSDNKLYRLQTPQSP
LVRPSMYDRYDLDNYPSGTNAVVAVISYTGYDMEDAMIVNKSSWERGFAHGSIYKTELVD
LADKVRGEDSVVFGTKPGDPKVSDKLDGDGLPHIGSTLQYGDPFYSYINLNTGQTFITFY
KNQESCVVDNIKICSNDTGSGRFKRVCITVRIPRNPTIGDKFASRHGQKGILSRLWPAED
MPFSESGMSPDILFNPHGFPSRMTIGMLIESMAGKSGALHGLSHDATPFSFSEDSSALEY
FGKMLQAGGYNYYGTERLYSGLSGRELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKV
TNQPVGGRNIQGGIRFGEMERDALLAHGSSFLLHDRLFNCSDRSVAQVCVDCGSLLSPLL
EKPPPYWSAMRHRQTVCLLCGRSDAIDSVSVPYVFRYFVAELAAMNIRVRLQVK
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggacttttctacaaagtggacaaacttaccgtccggaccgagcctgaagaacctgacc
cgggcaggtttcggcgccctgaaggaggaccagcacgcggcggtccaggacctgacccga
gcccacatcgagtccttcgaccaggcggtttctgacgggctgagccgggtcgtgcagtcc
atccctcctctggagttctccttcaggaacgagcagatcagtctggcgttcgtggaggcg
accatcttcagtcccctggtggccaaaggcagcatctgcagggagatgaaggtgtttcct
gctgagtgcagagggaggaggtgttcgtaccgggggaagctggtggcggacgtcagctgg
tcggtgaacggtgtccctaaaggcatcattaaacagtcgctcggtcagctgcccataatg
gtgaagtcaaagctgtgtaacctgcacgggctgagtccccgagagctggtggagcaccac
gaggaggcacaggaaatgggcggttacttcatcgtgaacgggatcgagaaggtgatcagg
atgttgattatgccaaggagaaactatcccatcgccatgtcccgacccaagtggaggagc
agaggacagggatacacccagtacggtatctctatgcggtgtgtgaaggaggagcacatg
gccatcaacatgaaccttcactatctggagaatgggactgtgatgcttaacttcatctac
cagaaggagctcttctttctccctcttggcttcgctctaaaggctctggtggagctgtcg
gacttggaggtgcagcaggagctgatgaagggtctggaggagaactcgttctttaggagc
tgtgtgtgtgagatgctgcgtgtggtgatggaggagggctgctccacccgaagctccact
ctcaactacctcggagagaggttcagggtgaagatgagcctgcctgagtggttcaccaac
gagcagtgtgctcatttcctgttagatgagtgcatcctgatccacctgcgctctgacgta
gagaagttccacctgctgtgtttgatgacgaggaagctgttcagctttgcgaagcaggag
tgtttggaggagaaccccgacagcatcatgtgtcaggaggtcctgacaccaggccagctc
tacctcatgttcctcaaggagcgcctgtcggcctggttggtgtcggtgaagctgtccttc
gagaagcgcggcagccggctgagcggaggctggagcgcagaaaacgtaatgaagattttc
aacatgggctccgacctcaccaaaccctttgagtacctgatggccactgggaacctcaac
tccaggacgggactcggcatgctgcagaacacgggtctgtgtgtcgtcgcagacaaactg
aacttcatccgctacctgtctcacttccgctgcgtgcaccgaggagccgccttcgccaag
atgaggaccacgacggtccggaagcttctgcctgagtcctggggctttctgtgcccggtc
cacacgccggacggggagccgtgtggactcatgaaccacatgacggccagctgtgagatt
gtcacgcagagtctttccacagtgtctctgcccacgctgctctgctccctgggtgtgact
cctgtggatggctctccggggcaggcgatctcagattgttacccggtggtgctggacggg
gccatggtcggctgggtggagactgaattagctccagcggtggtcaactcgttacgcagg
tttaaggtgctgagggagaagaagatgcctccttggactgagatagttctggttcctaaa
acggggaaggccagcctgtacccgggtctgttcctgttcaccacgccctgcaggatggtg
cggcccgtcaggaacttatctctggggaggcaggagctgattggcacctttgaacagctg
tacatcaatgtgggtgtgatggaggacgaggtggagcccagagtgacgtctcatcaggag
ctgtttcctcacagcatgctgagcgtggtcgctaacttcatcccgtactcagaccacaac
cagagtcccaggaacatgtaccagtgccagatgggtaagcagacgatgggtttccctctt
cactccttcacggatcgatccgataacaagctttaccgcctgcagacgcctcagagcccg
ctggtccggccctccatgtacgaccgctacgacctcgacaactacccgagcggcaccaac
gccgttgtggccgtcatctcctacacgggctacgacatggaggacgccatgatcgtgaac
aagtcatcgtgggagcgcggcttcgctcatggcagcatctataagactgagctggtggac
ctggcagacaaagttcggggtgaagacagtgtcgtgttcgggaccaaacctggagacccc
aaagtgtcggacaaactggacggtgacggtctgcctcacatcgggtccacactgcagtac
ggagacccattctacagctacatcaacctgaacacgggacagaccttcatcaccttctac
aagaaccaggagtcgtgcgtggtcgataacatcaagatctgcagtaacgacactggctcg
ggccgcttcaagcgggtctgcatcacggttcgaatccctcgtaacccaaccatcggcgac
aagttcgccagccggcatggtcagaagggcatcctgagccgcctgtggccggccgaggac
atgccgttcagtgagagcggcatgagccccgacattctgttcaatccgcacggcttccca
tctcgcatgaccatcggcatgctgatcgagagcatggcagggaagtcaggtgcactgcac
ggcctgagccacgacgccacgcccttcagcttctccgaggacagctcggcgctcgagtac
tttggcaagatgctacaggcaggggggtacaactactacggcacagaacggctgtacagc
gggctgagcgggagggagcttgaggcagacatcttcattggggttgtctactaccagcgt
ctgcgtcacatggtttccgacaagttccaggtgaggacgacgggggcgcgggacaaagtg
accaaccagccggtgggggggaggaacatccagggtgggatccggttcggggagatggag
cgagacgccctgctggctcacggctcatccttcctgctgcacgaccgtctgttcaactgc
tctgaccgctcagtggctcaggtgtgcgtggactgcggcagcctgctgtcccccctgctg
gagaagccccccccctactggtcggccatgaggcaccgacagacggtgtgcttgctgtgc
ggcaggagcgatgccatcgactcggtgtccgtgccgtacgtgtttaggtactttgtggcc
gagctggcagccatgaacatcagagtcagactgcaggttaaatag
DBGET
integrated database retrieval system
