KEGG   Semicossyphus pulcher (California sheephead): 138589256
Entry
138589256         CDS       T10596                                 
Symbol
nphp4
Name
(RefSeq) nephrocystin-4
  KO
K16478  nephrocystin-4
Organism
spul  Semicossyphus pulcher (California sheephead)
Brite
KEGG Orthology (KO) [BR:spul00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:spul03037]
    138589256 (nphp4)
Cilium and associated proteins [BR:spul03037]
 Primary cilia and associated proteins
  Nephronophthisis-related proteins
   138589256 (nphp4)
SSDB
Motif
Pfam: NPHP4_C2_3rd NPHP4_C2_2nd Ig_NPHP4_1st Ig_NPHP4_4th Ig_NPHP4_2nd Ig_NPH4_3rd NPHP4_SK DUF2155
Other DBs
NCBI-GeneID: 138589256
NCBI-ProteinID: XP_069515559
LinkDB
Position
Unknown
AA seq 1445 aa
MADGWREVFERSRFVPPPRQAVRLAVDSLFTQSHGFQLSLSQLTVAQFQQVSEGGQDLTF
QLRVTMFDRNHQHFFGKTWKSRPQRMKNNKISFNEVLYFHTSLRLPNMVVVLELVSLSPK
PDGSQQALGQGFTVLELFINRPEAQPADGDRRLNLHHGSPRNLLHPLLKDAVDYGSLLKT
IDGTRLDCLIKNHPALVSMMHLLPENVLVSGDENIPGLAASPTGDALLRPQLLKMQPFTL
NRLTISLQPSLEKFESQLLQLINADCHNTKQPGPEDTLRAVVIQERRLHVGVHNGWCFLE
KPQVVVLEFLSSGARSRADSTSKQSTLVKDSSSTLPQTLGLRSSLELRLANHHALAIVFQ
LEYVFSAPIGPETMLSTTSTSRAAFLQCLRWRAWCPFQEPAEWMGEEIKLVLQGGAEPNP
HGVMVYSTEMSAKTQSPVTLSAAGTAQISEAKDTIHFLLSSTLEKKELSPKVSLRTKQEE
EKRRSASSPSPGRKYIPPASPPESPQGPGLSLSQLAATSHYPTISHSSKALPWQQSFPSL
LHPSPLASAHQLSHVASVGVSNIVHMEMALHLKGDASPSAQDEGDQLEELPFTPVHAPVI
TVGINESSSCTVSSRSSLAHLYSAGFPDIMDYSGQVAEVLDPTEPVPFDPQREETDLLQG
NLLVFQFLAFTRIPTAGAGPGWPENIYFTFQFYRFPPVTSQQLKLLTSKMVQQKAGNPLP
CVLVSINKDGTFNSGSPGLQVQFRVDEGFLKPEEKRWFLRYLALHTMHIDIWDSNSLLLI
GSTAIDLKYLLRQGKPAVQALHEVEVLTTDYVGEDPLLTSANLGRQSAISPMTVHTIIRG
RLHIRTGNIGCPVDPSKSRPTDMMPTPSHIIKPREVTGGFRGGSLSSRNILQLNARNTAQ
AHRLEMDGDRVPLYKCGIRADIIMPREHNLNEPDSGSRKLNCMAAVHQREGKEDAKAAKV
MGRNNEPRLAREVNQITPSEERSKAEGIANMLSQAITTQHLLYASLGSAEYMEFVLKNPF
NVPQTVTILSDDPELSVLTNAEEWGYFKAVTKSPTPVEENMFHLEDGAPGPRVYLRPKES
IHIPLKYQSFLCDHTMALQGPSFLPTGIGSRVAKKNLSNIVAAKSIKVTFKAEDGKPMAI
CQVNVEPTPHVVDQTFRLYHPELCFLKKAIRLPPWQDPTVEEPDARTHISVRCSDPNIIC
QSRMLVPGEPQDVYLKVPGSPSPHIKMFFVMVFTGKWMAAPSQIWQIYVHFLERVDISCV
TGQRSCQSLVLRGKQAVRKVKCFSSHPQELEVDPDGVFLLPPTAVQELQLKVQPWEAGSR
FFYVNAVDVEQRRIVTAWLLCLNIHRPILSKAFEVCVPVGGGRGSSRKITYTNPYTRSRT
FLLRSDHPDLLQFKEDKFQISGGESYTIGLRFAPSQSPGSVEILVYVNNLEEKTEETFCV
KVNYS
NT seq 4338 nt   +upstreamnt  +downstreamnt
atggcggacggctggagagaagtatttgaaagaagccggtttgttcccccgccccgccag
gcagtccgcctggccgtggatagcctcttcacccagtcccacggctttcagctcagcctc
agccagcttactgtagctcaattccagcaggtgtcagagggtggccaagatttgaccttc
cagcttcgagtgaccatgtttgatagaaatcaccagcatttctttgggaaaacatggaag
agccgaccccagaggatgaaaaacaacaagatctccttcaatgaggtcctgtacttccat
acgtctctgcggttgcccaacatggtggtggtcctggagctggtgtccctgtcacccaag
ccagacggctcccagcaggccttggggcaaggcttcactgtcctggagctttttatcaac
aggccagaggctcagcctgctgatggggacagaaggctgaatctacaccatggatcacca
agaaacctcctccaccccctgctgaaggatgcagttgattatggtagtctcctgaagact
attgatggaacacgtttggactgtttgataaaaaaccatcctgccctggtttccatgatg
cacctccttccagagaacgtcctggtatctggagatgagaacattcctgggcttgcagct
tctccaacaggtgatgcgctgctgaggcctcagctactcaagatgcagcccttcaccctg
aacagactgaccatctccctccagccgtccctggagaagtttgagagccagctgctgcag
ctgatcaatgctgactgccataacacaaaacagccaggaccagaggatacactgagggct
gttgtcatccaggaaaggaggctccatgtcggggtccacaatggctggtgttttctcgaa
aagcctcaagtggtggtgctcgagttcctatcctcaggggcgaggagccgagcagacagc
acctccaaacagagcaccctggtcaaggatagctcatcaactctccctcagacgctgggc
cttcgcagcagcttggagctcaggctggccaatcatcatgctttggcaatcgtcttccag
ctggagtatgtcttctctgctccaattggcccagagacgatgctgtctaccacctccaca
tcccgagccgccttcttgcagtgccttcgttggcgggcttggtgccccttccaggagccg
gctgaatggatgggggaagagataaagcttgttctgcaaggaggcgcagagccaaaccct
catggagtcatggtctacagcacagagatgtctgccaaaactcagagccctgtgacactc
tcagccgcaggcacagctcagatctcagaggcgaaggatacaattcattttttgctatca
tccactctggagaagaaagagttaagcccaaaggtgtctctgaggacaaagcaggaggaa
gagaagcgaaggtcggcttcatcaccttcaccagggcgaaaatacattccaccagcttct
cctcctgaatcacctcaaggccctgggctctcgctgtctcagctggcagctacttcacac
tacccaaccatcagccactccagcaaggcgttaccatggcaacagtcgtttccttctctg
ctccatccctccccgttggcatcggcccaccagctgtcacatgtcgccagtgttggtgtc
agtaacatcgtccacatggaaatggcccttcatctgaaaggggatgcttcaccttcggct
caggatgaaggagaccaacttgaagagctacccttcacccctgtccatgcccctgtcatc
actgtggggatcaatgagtctagttcctgcacagtcagctccaggagctcactggcccac
ctttactccgctggcttccctgacatcatggattacagtggacaggtagcagaagtcctt
gaccccactgagcccgtgccctttgacccccagcgtgaagagactgaccttctacagggc
aacctgctggtgttccagtttctggcctttaccagaataccaacggcgggtgctggtcct
ggttggcctgaaaacatctacttcaccttccagttttatcgctttccgcccgtcacatcg
caacagctcaaactactgaccagtaaaatggttcagcagaaagctggtaatccacttccc
tgtgtcttggtctccatcaacaaagatggcactttcaactctggttctccaggcttgcag
gtgcagttcagagtagatgagggtttcctgaagccggaagagaagcgctggttcctgcgc
tacctggctctacacaccatgcacattgacatctgggacagcaattcactgctcctcata
ggttctactgcaatcgacctcaagtacttgttgcgtcagggtaaaccagcagtgcaggcg
cttcatgaggtggaggtgctgaccaccgattacgtgggagaggaccctctgctgacgagc
gcaaatttgggccgacagtccgccatcagccccatgacggtccacaccatcatcaggggc
cggctgcacatacgcacaggcaacatagggtgcccagtagaccccagcaagagcaggcca
acggacatgatgccaactccttctcacatcatcaaacctcgcgaagtcacgggtggtttc
agaggaggaagcctgtcctccagaaacatcctccaactcaatgcgaggaacactgcacaa
gcacacagactggagatggatggggatcgcgtgccattgtacaaatgtgggatcagagct
gacatcatcatgcccagggagcacaacctaaacgagcctgacagtgggagtcgcaagctc
aactgcatggctgctgtgcatcagcgggagggcaaggaagatgctaaagcagctaaggtc
atgggtcggaataatgaaccccgcttggccagagaagtcaatcaaattactcccagtgaa
gagcgcagcaaggcagagggcattgccaacatgctgagccaggccatcaccacccagcac
ctgctctacgccagcctgggctctgctgagtacatggagtttgttctaaagaatcccttt
aatgtaccccagactgtcaccatcctcagtgatgaccctgagctcagtgttctcactaac
gcagaggagtggggttacttcaaagcagtaaccaaatctccgacgccagtggaggagaac
atgttccacttggaggacggcgccccaggacccagggtttacctccggcccaaggagagc
attcatattcccctgaaataccaaagctttctctgtgaccacaccatggcccttcaggga
ccaagcttcctacctacaggcataggttcccgggtggctaagaagaatctatccaatatt
gttgctgccaagagtatcaaggttacatttaaagcagaagacggcaagccaatggctatc
tgccaggtgaatgtggagccaacccctcatgttgtcgatcagactttccgactttaccat
cctgagctctgcttcctcaagaaggccattcgtctgcccccatggcaagaccccacagtt
gaagaaccagatgctaggactcacatttctgtacgctgcagtgaccctaacatcatatgc
cagagtaggatgctggtgccaggggagcctcaggatgtgtacttgaaagtgccggggagt
cccagtccacacataaaaatgttctttgtgatggtttttactggtaagtggatggcagca
ccctcccagatctggcagatttacgtgcatttcctggagcgggtggatatcagctgtgtg
actggccagcgaagctgtcagtcgctggtgctgagggggaagcaggctgtgcgcaaggtc
aaatgtttctcatcacacccccaggagcttgaggtggacccagacggtgtgttccttttg
cctcctacagcagttcaggagctccagttgaaggttcaaccatgggaagccggcagccgc
ttcttttatgtgaacgcggtggatgtggagcagagacggattgtcaccgcctggctactc
tgtctcaacatccaccggcccattctgtccaaggcatttgaagtgtgtgtcccagttggt
ggtgggcgtggcagctccaggaaaatcacttacacaaacccctacacacgcagccgcaca
tttctgctccgctctgaccatccagacctgcttcagttcaaagaggataagttccagatc
agcgggggagagagttacaccatcggactacgatttgccccgagccagagtcccggttca
gtggagatactggtgtacgtgaacaacctggaggagaagacggaggagacgttctgtgtg
aaggtcaactactcatga

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