Semicossyphus pulcher (California sheephead): 138589351
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Entry
138589351 CDS
T10596
Symbol
pcdh20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
138589351 (pcdh20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
spul01009
]
138589351 (pcdh20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
spul04515
]
138589351 (pcdh20)
Protein phosphatases and associated proteins [BR:
spul01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
138589351 (pcdh20)
Cell adhesion molecules [BR:
spul04515
]
Cadherins
Protocadherins
138589351 (pcdh20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
FAM176
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
138589351
NCBI-ProteinID:
XP_069515716
LinkDB
All DBs
Position
Unknown
AA seq
889 aa
AA seq
DB search
MFNSRHPSLRKRGGIWGLCILLLYTSPLSCFANFSQAKELIYKIKEGLPRGTFIGAIGVD
LNLDFTVEPPFVFNLPQKKVSDQYVNLNNTTGELYTSATEIDRETLCPDNSGGRGCVLSL
DVFILPQQYFQLIKVKIYIEDVNDNRPKFPVDEIRISVPENTPINARYAVEHSAVDPDLG
LHGVQTYWLVNDFGMFTLDVEENEGGELTPFLIVTEALDRETQAEYITDIIAEDGGTPPL
LGAATLKILITDVNDNCPRFTESHVNVTLHGNTTKGAHLARLHAFDPDLDANAQINYAYS
ERLPRETRSLFHLDRITGVIKLAGKIDTGTNTFYKLTILANGPGCIPAVATVAVHIIKVV
TGPPAVMPRYIAPEKDGVVTIRESEPAFSPIAFFTVKNIDMNQRVDCHLEGTGPFRLVPY
QLLKNEYLLETTEPLDYEKTQEYELIVVAKNHRELVIKTFLKVQVLDENDNAPMFQQSLV
KLSVEENNPPNTFLTQLQATDPDSESRGEVIYLLGGDAPGIFIVDRVTGVLTVTTSLDRE
EKETYRFIVRAVDQGTPRRESIATVVLTVEDRNDNSPRFINKDFTFFVPENFPGYGEIGV
LSVTDADAGENGWVALSILNGSDIFMIDTGRGALRAKTSLDREQQGTYQLWIEASDGGEP
ALSCVTMVTVLLLDVNDNPPIVLFPQSNQSYMLVLPNTVPGTSITEVYAVDKDTGMNAVI
AYSIIKRKGGEPGSFAIDPETGNITLKRELSNRGLYSLLVKVSDHGQPEPLYSTVMVNFF
VNETVSNESYIQSLLTREADIEVEERPWYIGQMKEGPERYELFPCQPILIALSVTCLGLF
LSLVMLTSYICCKRFKKQRKKRSEVEVPLKTKNDSMQVVNKRLRQISNI
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacagcagacaccccagccttagaaaaagaggaggaatatggggattgtgcatc
ctcttgctttacaccagccctctttcctgttttgcaaatttcagccaagcaaaagagctc
atctataagataaaggagggattaccgagggggaccttcataggggccattggagtagac
ctaaatttggatttcactgttgagcccccctttgtattcaatctgccgcaaaagaaggtc
agtgatcagtatgtgaacctcaataataccaccggggagctttacacatctgctacagaa
attgacagggagacgctctgtcctgataactctgggggaaggggatgcgtcctctctctg
gacgtgttcattttgcctcagcagtacttccagctcatcaaggttaagatctatatcgag
gatgtgaatgacaacaggccaaagttccccgtggatgagatccgtatatctgtcccagaa
aatacacccatcaatgctcgttatgctgtggagcactctgcagttgatcctgacctgggt
cttcacggagtccagacatactggcttgttaatgactttggcatgttcacactggatgtt
gaggagaatgaggggggtgagctgacacccttcctcattgtgacggaggctttggacagg
gagacccaggctgaatacattacggatatcattgcagaagacggcgggacccctccttta
ctcggcgcggctactttaaaaattttaatcacagacgtgaatgataactgcccccgattt
acggagtcacatgttaatgtcactttgcatgggaatacaaccaaaggggcacatttggcc
cgtctgcatgcttttgaccctgaccttgatgctaatgcgcagatcaactatgcttacagt
gaacgtttgccaagggagaccaggagcttgttccatttggacagaatcacaggggtgatc
aagctagcagggaaaatagacactggcacaaacacattttacaaactcactattttggct
aatggacctggttgcatccctgctgttgccactgttgctgtccacatcatcaaagttgtt
acaggaccccctgcagtcatgccccggtacatcgccccagaaaaggatggggtggtgacc
ataagggagtctgagccagcgttttctccaatagctttttttactgtcaaaaacattgat
atgaaccaaagggtggactgtcatttggaagggactggtccgttcaggcttgtaccctac
cagttgctcaagaacgaatacctgcttgagactacagaacccttggactatgaaaaaacg
caggagtatgagcttatcgtggttgctaagaatcacagagaacttgtcattaagactttc
ctcaaggtgcaggtgcttgatgagaatgataatgcaccaatgtttcagcagtctttggtt
aaactctccgtggaggagaacaatccgccaaatacctttctgacccagctccaagccaca
gacccggacagcgaaagccgtggggaagtcatctacctccttggaggagacgctccaggg
atcttcattgtggatcgtgtgacaggtgtcctgacggtgaccacatcactagaccgtgag
gagaaagagacataccgattcatcgtgagagcggtggaccaggggacaccaaggagggag
tcgattgcaaccgtggtgctgaccgtggaagatcgcaacgacaacagtccacgcttcatc
aacaaggacttcaccttctttgtcccagagaacttcccaggatatggtgagatcggggtt
ctctctgtgacggatgctgatgctggggaaaatggttgggtggccctttccatcctcaac
ggcagcgacatcttcatgatagacacaggccgaggagcactgagggccaagacctcactg
gaccgtgagcaacaagggacataccagctgtggattgaggcaagcgatggtggggaacct
gcactttcctgtgttacaatggtgaccgtactattgttggatgtaaatgacaacccacct
attgtcctctttccccagtccaatcagtcatacatgctagttctacccaatacagtacca
ggaacatcaatcacagaagtctatgctgtggataaggatacaggcatgaatgctgtgatt
gcttatagtatcattaagaggaaaggtggcgagccagggtcgtttgccattgaccccgaa
acaggaaatatcacgttaaaaagggagctcagcaaccggggtctctacagccttctggtg
aaggtcagtgatcatggtcagcctgaacccctttactcaactgtcatggttaacttcttt
gtcaatgaaacagtgagcaacgagagctacatccagagccttttgaccagggaggcggac
attgaggtagaagagaggccctggtacattggccaaatgaaagaagggcctgagaggtat
gagttgttcccctgtcagcctatcctcattgctctttcagtgacatgtctggggctgttc
ttgtcactcgttatgctgacatcttacatatgctgtaagagatttaaaaagcagcgaaag
aaaagatcagaagtggaggtacctttaaaaactaagaatgactcaatgcaggttgtgaac
aagaggctcagacagatctcaaatatctga
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