Semicossyphus pulcher (California sheephead): 138589702
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Entry
138589702 CDS
T10596
Symbol
exosc10
Name
(RefSeq) exosome complex component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138589702 (exosc10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spul03019
]
138589702 (exosc10)
Messenger RNA biogenesis [BR:
spul03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
138589702 (exosc10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Lipase
Motif
Other DBs
NCBI-GeneID:
138589702
NCBI-ProteinID:
XP_069516212
LinkDB
All DBs
Position
Unknown
AA seq
893 aa
AA seq
DB search
MMASHKSGDPTNSGLQDANSMTNDEEKPDLCPGFKDVDAFVKYGLGAVLSATKASAALPQ
AGDEYDFYRSFPGFQEFCESQGDKLLLCMSQIMQHHGCRSHIRDQNKLTGLEERFDLVVD
SNDVILERAGILLDEADGVNRSQQPVMPSGFQPPKIVVSSWNRKGSGSGSRSEMFRLLHA
KNVARPQLKFKEKVDNSNTPFIPKIFIKPNAIKPLPSYFTNKQIRKQRPEDLDVPAALAD
FIHQQRTQEHVDDMFAHPYHYELNHLTVPESLLSKAEPQMYKPIAETKCSFIDSLEDLVA
LNEKLCKRSEFAVDLEHHSYRSFLGLTSLMQISTRDEDFIIDTLALRSEMYILNKAFTDP
TIVKVFHGADSDIEWLQRDFGLYVVNLFDTHQASRGLNLARHSLDHLLKHFCNVDSDKRY
QLADWRIRPLPDEMVQYARTDTHYLLYIYDCVRAQLLDFNHGQPGLLQSVWSKSKDISLK
KYVKPIYTEESYLELQRKQKKSFNTQQLTAFRLLFAWRDKLARQEDESTGYVLPTHMMSK
ISEELPKEPQGIIACCNPVPPLVRQQVNELHLLVQQGREMPLLKAEIAAQKKKGLTPIKK
PEVTLFGPHDTSRASESDHHPFSPDELPVKQGVLFSDDEHKMDVDVPKTSGLIASAKITL
FEELEPQKDQESLPVAQMKARRIIESFENPFRMYLPSSDVHVNKNAKFDPSSKIFEISKR
WKLQSIEQQQKELEAKRKVKEEAKERAKKVAEERNKAKQTYKESLQNVATVREQAAESEK
GGGKKRERVPSEVGESTPKPSKKLMKSAENPQKTEAPPKDAFKPFDYSQSDLKVFAGTKA
KDNTQFDPNRQGHDFRKKKNPKGQKSNFAAGNRSMSYMAGKSDRGFRHNWPKR
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgatggcttctcacaagagtggtgatcccactaacagtggccttcaagacgccaattca
atgaccaacgacgaggaaaaacccgatttgtgtcccggctttaaagacgtggatgccttc
gttaaatatggtttgggtgcggtgttatccgccaccaaggcatcagccgccttgcctcaa
gctggagatgaatatgatttctatcggagcttcccgggtttccaggagttctgtgaaagt
caaggagataagcttttgctctgcatgagtcagataatgcagcatcacggctgcagatct
cacattagagaccagaacaagctgacggggctggaggagaggtttgacttggttgtggac
tcaaacgatgtcatccttgaaagagcggggattcttctggacgaagctgacggggtgaac
aggagccagcagcctgtcatgccttcagggtttcagcctcctaagattgtcgtttccagc
tggaatcgaaagggttcaggctctggcagtcggtcggagatgttcagactgctccatgcc
aagaacgttgcgaggcctcagctgaaattcaaggaaaaagtcgacaacagcaacacacca
ttcattccaaagatcttcatcaagcccaacgcaataaagcctcttccatcttatttcacc
aacaaacaaatccgtaagcagagaccagaggacctcgatgtcccggctgccctggctgac
ttcattcaccagcagagaactcaggagcatgttgacgacatgtttgcacacccttaccat
tatgagctgaatcatcttacagtaccagaaagccttctgtcaaaggcagaaccgcagatg
tacaaaccaatagctgagaccaagtgctctttcatcgactctctggaggatctggtggct
ctgaatgagaagctgtgcaaacgatctgaatttgcagtggatcttgagcaccattcctac
aggagtttcctcggcctcacctccctgatgcagatctccaccagagacgaggacttcatc
atcgacaccttggcgctccgcagcgagatgtacatcctgaacaaggcgttcactgaccca
actattgtcaaggtgtttcacggcgctgactctgacattgagtggctgcagagggacttc
ggcttgtacgtcgtcaacctttttgacacgcatcaggccagccgaggtctgaacctggcc
agacattccctcgaccacctgctcaaacacttctgcaatgtggactcagacaaacgctat
cagctggctgactggaggattcgccccttaccagatgagatggtgcagtatgcccggaca
gacacccactacctcctctacatctacgactgtgtgagggcgcagctgttggacttcaac
cacggacagcccggcctgctgcagagtgtctggagcaagagcaaggacatttccctgaag
aaatatgtgaagcccatctacacggaggagtcgtatttggagctgcagcggaagcagaaa
aagtcttttaacacccagcagctcactgccttcagactgctgtttgcctggagggacaag
ctggccaggcaggaagatgaaagcaccggatatgtgctgcctactcatatgatgagcaag
atatccgaggagctgcccaaagagcctcagggcatcattgcctgctgtaaccctgtacca
ccgctggtgaggcagcaggtcaatgagctccatttgttggtgcagcaaggcagagaaatg
cctctcctgaaggctgagattgcagctcagaagaagaagggactcacgcccataaaaaag
ccggaggtcacattgttcggtcctcatgatacatccagggcctctgagagcgatcaccat
cccttttcccctgacgagctgcctgtgaaacaaggggtgctcttctcagacgacgagcac
aaaatggatgtcgatgttccgaaaacaagtggtctcattgcatcagctaaaatcacactg
tttgaggagctggaaccacagaaggaccaagagtccctccctgtggctcagatgaaagcc
agacgcatcattgagtctttcgaaaaccctttcagaatgtatttaccctccagcgatgtg
cacgtcaacaagaatgccaagtttgatccgtcttcaaaaatattcgagatcagcaaaaga
tggaagctgcagagtatcgaacagcaacagaaggagctggaggccaagaggaaagtgaag
gaagaagcaaaggagcgtgcaaagaaagtggcagaggaaagaaacaaggctaaacagacc
tacaaggagtctctacagaacgttgccacagttcgtgagcaagcagcggagtctgaaaaa
ggtgggggaaagaagagagagagggttcccagtgaggttggagagtcgactcccaaaccg
agtaagaagctgatgaaatctgcggagaatccccaaaagacagaagcacctcccaaagat
gccttcaagcccttcgactacagtcagtcagacctcaaagtctttgctggtaccaaagca
aaggacaacacacagttcgatccaaaccggcagggtcatgattttaggaaaaagaaaaat
cccaagggacaaaaatccaactttgcagctggaaacaggagtatgtcgtacatggctgga
aaatcggacagaggattcaggcataactggcccaaaagataa
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