Semicossyphus pulcher (California sheephead): 138589712
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Entry
138589712 CDS
T10596
Symbol
ube4b
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul04120
Ubiquitin mediated proteolysis
spul04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
138589712 (ube4b)
04120 Ubiquitin mediated proteolysis
138589712 (ube4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spul04121
]
138589712 (ube4b)
Enzymes [BR:
spul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138589712 (ube4b)
Ubiquitin system [BR:
spul04121
]
Ubiquitin ligases (E3)
U-box type E3
138589712 (ube4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
138589712
NCBI-ProteinID:
XP_069516225
LinkDB
All DBs
Position
Unknown
AA seq
1182 aa
AA seq
DB search
MEELSADEIRRRRLARLAGASQPSTPLSTPLTSPQRETPPGPLPGPSVATSQPLPPAASQ
SLGLNVHSGTPATSPMGTSGVAYGSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDTA
SCEKSMSQVDVDSGIENMEVEDSDRREKRNLTEKETSANSDVSEEQALQLICKILRVSWK
EQDRDVIFLPSLAAEFHQNPKDVYSDFKDLIGQILMEVLMMSTQSRVHNPFASLTATSQP
IAAAKSPDHRLTLVQPSSQGGSPMGPSAGSFGASSLSSLGACGGGMSCDSASDRFTIETC
KETEMLNYLIERFDSVGMEERKAPKMCSQPNVSQLLSNIRSQCISNVALVLQGTLTQPRS
PLEQSLLVPYMLCRNLPYGFIQELVRITHQEEEVFRQIFIPILHGLALAVKECSFDSDNF
KFPLMALAELCEIKYGKTHPVCNLVTSLPLWCPKPLSPGCGREIQRLSYLGAFFSLSVFA
EDDTKVGDKYFSGPAITMENTRVVSQSLQHYLESARGDLFKILHNILLNGETRETALNYM
AALVNYNVKKAQMQTDDKLVSADGFMLNFLWVLQQLSMKIKLETVDPYYIFHPRCRLVVS
SEETRLKATMEELKSWISELHEDPNKFSEPKFPTECFFLTLHTHHLSILPGCRRYIRRLR
AIRELNRTVEELKNSESQWKDSPLASRHREMLKRCKTQLKKLVRAKACADVGLLDENLLR
RCLQFYSTVIQLILRMVDPAYPNINLPLNPEIPKSFAALPEFYIEDVAEFLLFVVQYSPQ
VLYEPCVQDIVTFLVVFICSQNYIRNPYLIAKLVEVLFVTNPAVQPRTQRFSEMMENHPL
SVKQLVPALMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNLAHHGTFMEEFNSGK
QFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWEQLPREQQQSRQSQLTQDER
VSRSYLALATETVEMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENP
EKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSRELFEEVISKMRKAGIKSSIAI
EKFKLLLEKVEEIVAKNSQSEMDYSDAPDEFKDPLMDTLMTDPVILPSGNIMDRSIILRH
LLNSPTDPFNRQPLTESMLESVPELKERIHAWMREKQGGRLV
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atggaggagttgagcgcagatgagatccgcagaaggcgactggcacgactggcaggggcg
tcacagcccagcacccctctcagcacacccctgacatccccacagagagaaactccccct
ggacccctccctggaccctcagttgccacatcccagcccctgccaccagctgcctctcaa
tcattggggttaaatgtccacagtggtacccctgccacatcccctatgggcacctctggg
gtggcatatggtagtcagagcagcgagggtgtgagctccctctccagctctccctccaac
agccttgagactcagtcccagagtttgtcccgatcgcagagcatggacattgacactgcc
tcctgtgaaaagagcatgtcccaggtggatgttgactcagggatcgagaacatggaggtg
gaggacagcgatcgcagggagaagaggaacttaactgaaaaggaaacctctgcaaactca
gatgtctcagaagaacaggctctgcagctcatttgtaagatcctccgcgtatcgtggaag
gagcaggatagagatgtcatcttcctcccttcactggctgcagagttccaccagaaccct
aaagatgtatactctgacttcaaagacctgattggccagatcctgatggaagtcttaatg
atgtccacacagtcacgtgtccacaacccctttgccagcttaaccgccacctctcagcca
attgcagcagccaaatctcctgaccaccgtctgacgctggtgcagccctccagccaaggt
ggcagccccatgggccccagtgcaggatcctttggagccagctctctgtccagtcttggt
gcatgtggaggggggatgtcatgtgactcagccagcgaccgcttcaccattgaaacatgc
aaagagacagagatgctgaactacctcattgagcgttttgacagtgttggcatggaggag
aggaaagctcccaagatgtgtagccaaccaaatgtcagccagcttctcagcaacattcgc
tctcagtgtatttccaatgttgccctggtccttcaaggcaccctgacccagccgcggagt
cctctcgagcagtctttgctggtaccctatatgctgtgtcggaacctcccttatggcttt
attcaggagctggtgcgcattacccaccaggaggaagaggtgttcagacagatcttcatt
cccatcctccacgggctggctcttgcagtgaaagaatgttcctttgacagtgacaacttt
aaattccccctcatggcattagctgagctctgtgaaatcaagtacgggaagactcaccca
gtgtgcaatttggtaacgtcgctgcctctctggtgtcccaaacctctgagccctggttgt
gggagagagatccagagactgtcctacttgggagccttcttcagcctctctgtgtttgct
gaagatgacaccaaagtaggagacaagtatttctctggcccagccatcaccatggagaac
acgagagttgtcagtcaatcattgcagcactacctggagtcagcgaggggtgacttgttt
aaaattctccataacatcctactaaatggagaaactcgtgagacagctcttaattatatg
gcagctcttgtcaactacaatgtgaagaaagctcagatgcaaactgatgacaagctggtg
tcggcagacggcttcatgctcaacttcttatgggtgctgcaacagctgagcatgaagatt
aagctggagacagtggacccctactatatctttcatccacggtgtcgcctcgttgtcagc
tcagaggagacgcgtcttaaagccaccatggaggaactcaagagctggataagtgaactg
cacgaagaccctaacaagttctcagaacccaagttccccaccgagtgcttcttcttgaca
ctgcacacccaccatttgtctatcctgcctggctgcagacgctacatccgcaggttgcga
gccatccgggaactaaataggactgtagaggagctgaagaacagtgaaagccaatggaag
gattcacctctggctagtcgacacagagagatgctgaagcgatgcaaaacccagcttaag
aaattggtgcgagccaaagcttgtgctgacgtgggccttctggatgaaaacctgctgcgc
agatgtctgcagttctacagcaccgtcattcagctcattctccgcatggtggatcctgcc
tacccaaacattaacctgccactgaaccctgagattcccaaaagctttgctgctctacct
gagttctacattgaagatgtggccgagtttctgctttttgtcgtgcagtattctccacag
gttttatatgagccgtgtgtacaggacattgtcaccttcttggtagtgttcatctgcagc
cagaactacatcaggaacccctaccttattgccaagttggtggaggtgctgtttgtcacc
aaccctgctgtacagcctcgtactcagcgtttctctgaaatgatggagaaccacccgttg
tctgtcaaacagctggtccccgccctcatgaaattctacactgatgttgaacataccggc
gccaccagcgagttctatgataaattcactatacggtaccatatcagcactatcttcaag
agtctctggcagaacctggcccaccatggcaccttcatggaggagttcaactctggcaag
cagtttgtgcgctacatcaacatgctgataaatgacaccacattcttgttagacgagagc
ctcgagtccctgaagcgtatccacgaggttcaggaagagatgaagaacaaagagcagtgg
gagcagctgcctagggagcagcagcagagccgccagtcccagctgactcaggatgagcgg
gtgtctcgctcctatctggccctggccacagagacggttgaaatgttccacatcctcacc
aagcaagtccagaagcctttcctcaggcccgagctggggcctcgtttagctgccatgctg
aactttaacctccagcagctctgcgggcccaagtgtcgtgacctgaaggtggagaacccg
gagaagtatggctttgagcccaagaagctcttagaccagctaaccgacatctacctgcag
ctagactgtgcccgcttcgctaaagcaattgcagatgaccagcgttcatacagccgtgag
ctctttgaagaggtgatatcaaagatgcgaaaggctggtatcaagtcctccatcgccatt
gagaaattcaagctgcttttggagaaggtggaggagattgtcgcaaagaattcccaatct
gaaatggactacagtgacgcacctgacgagttcaaagaccctctcatggacaccctgatg
accgaccctgtgatactgccttccgggaacataatggaccgatccatcattctgcgccac
ctgctcaactcccccactgatcccttcaacaggcagccactcacagagagcatgctggag
tcagtccccgagttgaaggagaggatccatgcctggatgagagagaaacagggcggacga
cttgtctaa
DBGET
integrated database retrieval system
