Semicossyphus pulcher (California sheephead): 138590130
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Entry
138590130 CDS
T10596
Symbol
rbm39b
Name
(RefSeq) RNA-binding protein 39b isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spul03041
]
138590130 (rbm39b)
Spliceosome [BR:
spul03041
]
Common components
Common spliceosomal components
General mRNP proteins
138590130 (rbm39b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
138590130
NCBI-ProteinID:
XP_069516797
LinkDB
All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
MADDFDVEAMLEAPYRKDEIKSSHANGHDDSSKKKRRSRSKSRSPGSRKRRSRSKDKKKG
KKRSRSRERKRSRSRERHRSGSRSKERSGRYRARKSPIRKRSKSRSPPFKKEKSPVRQPI
DNLTPEERDARTVFCMQLAARIRARDLEDFFSAVGKVRDVRMISDRNSRRSKGIAYIEFV
EASSVPLAIGLTGQRLLGVPIIVQASQVMAEKNRAAAAANNLQKGSSGPMRLYVGSLHFN
ITEEMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAECAKKALEQLNGFELAGRP
MKVGHVTERSDSSTASSFLDNDELERTGIDLGTTGRLQLMARLAEGTGLKIPPAAQQALQ
MTGSIPFGNISAPPAVPTPAPSQALNLPSQPLATHCLQLSNLFNPQSENDPTWAIEIQDD
VIEECNKHGGIVHIYVDKNSAQGNVYVKCPSIPAAMATVNALHGRWFAGKMITAAYVPLP
TYHNLFPDSVTAKQLLMPARR
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgattttgacgttgaggccatgctggaggctccatacagaaaggatgagatc
aagtcctctcatgcaaatggacatgacgactcgagcaagaagaaaaggaggagtcgaagt
aagagccgaagccccggctctaggaagagaagaagcagaagcaaagacaaaaagaagggt
aagaagaggagcaggagccgggaaagaaaacgaagccgcagcagagagcgacatcgcagc
ggctctcgaagcaaggaaaggtccgggcggtacagagcacgcaagagccccatccggaaa
agatccaaaagccggagcccccctttcaaaaaggaaaagagtcccgtcaggcaacccatt
gacaatctaacaccagaggagagagatgcccgcacagttttctgtatgcagctcgctgcg
agaatcagagctcgagacctggaagatttcttctcggccgtcggaaaagtaagagacgtg
aggatgatctcagacagaaactccaggaggtcaaagggcattgcatacatagagtttgtg
gaggcctcttctgtaccactggcaattggattgactggacagaggcttttaggagtgccc
atcatcgtccaggcctctcaggtcatggcagagaaaaacagagctgctgctgctgccaat
aatctacagaagggcagttcaggtccgatgcggctgtacgtgggctcgctgcacttcaac
attactgaagaaatgctccgggggatcttcgaacctttcggaaagattgaaggaatccag
ctgatgatggacagcgagactggacgatccaaaggatacggtttcatatcgttcgcagat
gcagaatgtgcgaaaaaggctttggagcagctgaacggcttcgagctggccgggcgtccg
atgaaagtggggcatgttacggagcgctcagactcatcgacagccagctctttcctggac
aacgatgaactggagaggaccggcatcgacctcggcaccacaggacgtctgcagctcatg
gctcgactagcagaaggaactggtctgaagatccctcctgctgctcagcaggctctacag
atgaccggctccataccctttggtaacatttctgctccaccagctgttccaactccagct
ccaagccaagcattgaacctcccatcacagccgctggccacacactgccttcagctgtcc
aacctgttcaacccacaatcggaaaatgatcccacctgggccatagagatccaggatgat
gtcatagaagagtgcaacaaacatggaggaattgttcacatttatgttgataagaactct
gctcaaggtaatgtgtatgtgaagtgtccctcaataccagcagcaatggcaactgtaaat
gcacttcatggacgctggtttgcaggcaaaatgataacagctgcctacgtccccttacca
acctaccacaaccttttccccgattcagtaacagcaaagcagcttctaatgccggcacgt
cgatag
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