Semicossyphus pulcher (California sheephead): 138590321
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Entry
138590321 CDS
T10596
Symbol
clstn1
Name
(RefSeq) calsyntenin-1 isoform X1
KO
K22659
calsyntenin 1
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
spul04515
]
138590321 (clstn1)
Cell adhesion molecules [BR:
spul04515
]
Cadherins
Cadherin related
138590321 (clstn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
CDC45
Laminin_G_2
FAM176
PRIMA1
Toxin_R_bind_N
EphA2_TM
V_ATPase_I
Cadherin_C_2
PFF1_TM
TMEM132_C
Motif
Other DBs
NCBI-GeneID:
138590321
NCBI-ProteinID:
XP_069517036
LinkDB
All DBs
Position
Unknown
AA seq
980 aa
AA seq
DB search
MRFRGNTQFASAVGLVLGLLCAVEAAKVNKHKPWIETTYHGIVTENDDKVLLDPPLIALD
KDAPLRYAESFEVTLTEEGEICGFRIHGQNVPFEAVVLDKSTGEGVIRAKDKLDCELQKE
HTFTIQAYDCGEGPDGANMKKSHKATVHIQVNDINEYSPVFKEKSYKATVIEGKKYDSIL
KVEAVDADCSFQFSQICNYEIVTPDVPFTVDKDGFIKNTEKLSYGKERMYKLTVTAYDCG
KNRASEDVLVKISVKPTCKPSWQGFNKRIEYEPGTGSLALFPSMHLETCDEPITSIRANI
ELETNHIGKGCDRDTYSEKSLHKLCGASSGTVELLPAPSSSSNWTVGLPTDNGHDSDQVF
EFNGTQAIKVPDGMVSTSLKEPFTISVWMRHGPGAHEKETILCNSDKTEMNRHHYSLYVH
NCRLILLLRQDPSEAENYKPAEFHWKLDQVCDKEWHHYVLNVEFPTVSLFVDGTTFEPFL
VTEDYPLHASKIETQLTIGACWQDNSGHDNDTESVSEPTSGANARMAQFFRGNLAGLMIR
SGKLENKKVIDCLYTCKEGLDVQLPEEVASAVKVEFNPNQSSLTVEGDDIDAFDKVMQHI
SYLNSRQFPTPGIRHLRISTTVKCFNEEACVTVPDAEGYVMVLQPEEPKISLSGIDHFAR
SAAEFESQEGVTLFPELRIVSTITREVEAETESEAAEGADDDPTVQETVVSEEIMHNLDT
CEVSVVGDELDGEHESLEVDMSQLQQHGLEMSSSNLGLVVTGVNTMANYEQVLHLIRYKN
WHTEALFDRKFKLVCSELNGRYISNDFKVEVNVIHTANPVEHANNAMVQPNFINPVHHAS
VDLSGHNLVNAHQASVVPSAATIVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQENGKEN
EMDWDDSALTITVNPMETYEDQHSSEEEEEEEESEDGEEEDDITSAESESSEDEEGGEPE
DQQGASRQQQLEWDDSTLTY
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgcggttccgagggaatacacaatttgcatccgctgtcggactggtcctcggactctta
tgtgcggtggaggcagctaaagtcaataagcacaaaccatggatcgagacgacgtaccac
gggatcgtaacggaaaacgatgacaaagtacttctggacccccctctaattgcactggac
aaggatgctcctctacgctacgcagagagttttgaggtgaccctcactgaagaaggtgag
atttgcggcttcaggatccacgggcagaatgtcccctttgaggcagtggtcctggacaag
tccactggcgagggggtcatccgggccaaggacaagctggactgcgagctgcagaaggag
cacaccttcaccatccaagcctacgactgcggagagggtcccgatggtgccaacatgaag
aaatcccacaaggccaccgtccacatccaggtgaacgacatcaacgagtactcgccagtg
ttcaaagagaagtcttacaaagccaccgttatcgagggaaagaagtacgacagcatcttg
aaggtggaggcagtggacgccgactgctccttccagtttagccaaatctgcaactacgag
atcgtcactcctgatgtgcccttcaccgttgacaaagacggcttcatcaagaacactgag
aaactgagctatggcaaagagcgcatgtacaagctgaccgtgaccgcctacgactgtgga
aagaaccgagcctccgaggacgtcctggtcaagatcagcgtcaagccaacctgcaaaccc
agctggcaaggatttaataagaggattgaatatgagcccggcacaggtagcctcgccctt
ttccccagcatgcacttggagacatgtgatgagccaatcacgtccatccgagctaatatt
gaactggaaaccaaccatatcgggaagggctgcgaccgtgacacatactctgagaagtct
ctgcacaagctgtgtggagccagctctggcaccgtggagctcctgcctgcacccagcagc
tcctctaactggacagtagggctacccacagataacgggcatgacagcgaccaggtgttt
gagttcaatggcacccaggcaatcaaggttcctgatggcatggtgagcaccagcctgaag
gagcctttcaccatctccgtgtggatgagacacggccccggggcccatgagaaggagacc
atcctctgcaactctgacaagacagaaatgaacagacaccactactcgctctacgtccac
aactgcaggctgatcctcctcctgcgccaggatccatccgaggccgagaactacaaacca
gcagagtttcactggaaactcgaccaggtgtgtgataaagagtggcatcactatgtgctg
aatgtggagttccccaccgtgtccctgtttgtggatggaactacatttgagcccttcctg
gtcacagaggactacccactgcacgcctccaagattgaaactcagctcaccattggtgcc
tgctggcaagacaactcaggacatgacaatgacactgagtcagtctctgagcccacctca
ggcgcaaatgcccgaatggctcagtttttccggggcaacctggccgggctgatgatccgc
tctggcaagctggagaacaagaaggtgatcgactgtttgtacacatgcaaggaaggactt
gacgtgcagctgcctgaggaggtagcttcagctgtcaaggtggagttcaaccccaaccaa
tcctctctgactgtggagggcgacgacatcgacgcctttgacaaggtcatgcagcacatc
tcctacttgaactcccgccagttcccgacccccggcatcaggcacctccgcatctccacc
accgtcaagtgcttcaacgaggaggcctgcgtaacggtgcccgacgctgaaggttatgtg
atggtgctgcagcccgaagagcccaagatcagcctgagcggcatcgatcactttgcccgt
agcgctgctgaatttgaaagccaggaaggtgtgacgctattcccggagctacgcatcgtg
agcaccatcacccgcgaggtggaggccgaaacagaatctgaagcagcagagggagctgat
gatgaccctacggttcaagagacagttgtgtcagaagagatcatgcacaacctggacaca
tgtgaagtgtctgtggttggagacgagctggacggggagcatgagagcctggaggtggac
atgtcccagttgcagcagcatggcctggaaatgagttcctctaacctcggtctcgtcgtc
accggtgtgaacacaatggccaactatgagcaggtcctgcatcttattcgttacaagaac
tggcacacagaggctctctttgacaggaaattcaaactggtctgctctgaactcaacggt
cgctacatcagcaatgacttcaaggtcgaggtgaatgttatccacacagccaatcctgtg
gagcatgcaaacaatgccatggtgcagcccaacttcattaaccccgtgcatcatgcctct
gtggatttgtcaggtcacaacctggtcaacgctcaccaggcctcagtggttcccagtgct
gccaccattgtcattgtggtgtgtgtaagcttcctggtgtttatgatcatcctgggcgtg
ttccgcatccgtgctgcacaccagcgcaccatgagagaccaggagaatggcaaagagaac
gagatggactgggatgactcggccctcaccatcaccgtcaaccccatggagacatacgaa
gaccagcacagcagtgaggaggaggaggaagaagaggagagcgaggacggagaggaggaa
gatgacatcacgagcgctgagtcagagagcagcgaagatgaagagggcggggagccggag
gaccagcagggggccagcagacagcagcagctggagtgggacgactccaccctcacctac
tag
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