Semicossyphus pulcher (California sheephead): 138590792
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Entry
138590792 CDS
T10596
Name
(RefSeq) SR-related and CTD-associated factor 8-like
KO
K13191
RNA-binding protein 16
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
Transcription machinery [BR:
spul03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
138590792
Spliceosome [BR:
spul03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
138590792
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138590792
NCBI-ProteinID:
XP_069517252
LinkDB
All DBs
Position
Unknown
AA seq
1446 aa
AA seq
DB search
MEAVKAFNNELYSLNEYKPPISKAKMTQITKSGIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGTEKDVFAPRFSKNIIATFQHLYRCPSDDKSKIVRVLNLWQKN
AVFKSDIIQPLLDMAAGIPPPSVTPVMPSSAAPVNNTTPGTPATPATPANIVQGLPDWAS
QITNTDTVAAVAQILQSPQGQQLQQLVQSLQMQQQKPQPSLLQALDAGLVVQLQALTAQL
TAAATANSLNPLEQRVSSFNKKLLGPFDFGNDSERGEESKKDSSSSQLPMVSEPINSSLF
HQLAEQLQQQNLEQFQKQLLEHQQHQQKAMSLEGQDSIFGQDNSVATAQSSSQPQIPEQE
NKVDDSIDNQQQDMDLDEGPDGMEEEIFDADEKKIASTRSRTRSRSRSRSPKRRRSRSRS
GSRKRKHRKRSRSRSRDRKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTLW
VGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYICMVHRQDAFRARQKLSTGSFKIG
SKIIKIAWALNKGVKQEYKQFWDVDMGVTYIPWEKVKLDDLDDFAEGGIIDQETVNDEWE
AAKNAETVKEVTSLPVSAETTAASNSQTETYNQQVTMMPVQLPVAQAVPSAVGLVPPTFP
VAMSIPPPGYGPPPPFIRAGFNTSQPPPGFMQTAGMASATSSLVQPSVASSQESIKESPF
GAMIPPTSSLPGGFMASAIPGAGVFNPVGVQTQQATNDKTAQSAEGMDAAAELTLQGMQN
AVRSGMGLLGMHPSSLTHPLHQSGLAGQRMPGLLPLDVRPNLLQPGAAARFPLLMQQGPA
QQAAGLLDSSLQAQARARAPFSQLDPFNRAPNLANENVSKTEDESSGADEGKDQDYRFPP
MEKQSTGLLRTPPPEHREPLGGGGGTGGGVGGRPPLLQTPGTQPARTSLVGRLQALAGFT
PDNRWNQTRGDFDERDSMRGGLQAPGGPKGFQEERPTPGQNFPNRFDSRPGTAGGAAGVP
GNAGAVGGPQAWNRSSSGGAGAPFDSELHQDLDDRRRPWDRQRDRDERDFDFRREMNGNR
HSRERERERERERDRERGRDRTREHDRDRDKERDRERERERGGWTPLLPLPTPLLPTPPL
NPNLSLNQGKLLGLLKLNPQIQPRFQSPLQPQAQAKSPLLGLNQPLPQAQIKSPPPSQSP
AAVPETESETPAPSETPPTQSPTPAQSPDPSSDDKSQSPMTEAPTQAEPSPKTETPPQAE
SPPQPMAQSPSKTSASPDNETLSQASPLFEASTQESPVAFAQAASPPEETTHSLEEQESP
QKDEVESQEGASSPQPQWVNGSGTDNSTVAEPTPEASLEPSPEASPEPTPEASPEPSPEP
SPEASPEHSPDHTKEPTSDLVLPESEVEQPQEQLASPKDVDNEQSEPMEEAASQPVVDTV
TDTEGT
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtcaaagcgtttaacaatgagttgtactcattgaatgagtacaagccaccc
atctccaaggccaagatgacacagatcaccaagtctggaatcaaggctataaaattctac
aagcatgttgtccagagtgtggagaagttcatacagaagtgcaaaccagaatacaaagtc
cctgggctgtacgtcatcgactcgatcgtcagacagtcccgacatcagtttggaacggag
aaggatgtttttgccccacgcttcagcaagaatatcattgcaacgttccagcacctttat
cgttgcccttcagatgataagagtaagatagtgcgagtactgaacctgtggcaaaagaat
gcagtcttcaagagtgacatcatccagcctctgttggacatggctgcagggattccccct
cccagcgtcacacctgtcatgcccagcagtgctgctccagtcaataacactacacctggt
accccagctactccggctaccccagctaacatagtacagggtctgcctgactgggcttcc
cagattaccaacacagacaccgttgctgctgttgcacagatcctacaaagtccccaggga
caacagctgcagcagctggtacaaagtctacagatgcagcagcagaagccccagccgtcc
ctgctgcaggccttggatgctggcctggtggtgcagttgcaagctctgacagctcagctt
acagctgctgctactgccaacagcctcaacccgctggagcagagggtctcctcttttaat
aagaaactcctgggaccttttgattttgggaatgactctgaacgtggtgaagaatctaaa
aaggactcgtcatcatctcagctgcccatggtgtcggagccaataaacagctccctcttc
catcagctggctgagcagctacagcagcagaacctggagcagtttcagaagcagctctta
gagcaccagcagcaccaacagaaggcaatgagcttagaagggcaggactcaatctttgga
caagacaactcagttgcaacggctcagagcagcagtcagccacaaattcctgagcaagaa
aacaaagtggatgactccatagacaaccaacagcaggacatggatctggacgagggccct
gatggtatggaggaggagatttttgatgcagatgagaagaagattgcaagcacacgttcc
agaacgcgctcaaggtcacgctctaggtctcccaagaggagaaggtccaggtcccgctcc
ggctcccgcaaacgaaaacatcgcaagaggtcgaggtcacgctccagagaccgaaagagg
aagtcatcacggtcttactcgagtgaaagacgcgccagggagcgcgagaaggagcgccag
aagaaaggactgcctcctatacgatccaagactctaagtgtgtgcagcacaactctgtgg
gtgggccaggtggacaaaaaggccactcagcaggacctcaccaacttatttgaagagttt
ggccagattgagtccataaatatgatccctcccagaggctgtgcctacatctgtatggtc
cacagacaggatgcattccgcgcccgacagaagctcagcaccggctcctttaagatcggc
tccaaaatcatcaagattgcatgggctctgaacaaaggggtaaagcaagagtacaagcag
ttttgggatgtggatatgggcgtcacatacataccctgggagaaggtgaagctggatgac
cttgatgactttgctgaaggaggaatcattgaccaggagacagttaatgatgagtgggaa
gcagccaagaatgctgagacagtcaaggaagttactagtctgcctgtaagcgctgagacc
acagcagcatctaacagccagactgagacgtacaaccagcaggtcaccatgatgcctgta
cagctgccagtggcccaggctgttcccagtgcagtaggtttggtacctccaaccttccct
gtcgctatgagcatacctccaccaggctatgggccaccaccacccttcataagggctggc
ttcaatacctcgcagcctccgccaggttttatgcagacagcggggatggcctcagccact
tcttctctagtgcagccttcagtggcaagcagccaagaatcgattaaggaatcaccattc
ggcgcaatgattcctccgaccagctctttacctggtggcttcatggcctcagccatccct
ggagcaggtgtgttcaacccagtgggagtccaaactcagcaagccaccaatgacaagaca
gcacagtctgcagagggtatggatgctgctgcagagcttacactgcaaggcatgcagaat
gcagtccgcagtgggatgggtctccttggcatgcacccttcatccctcacacacccgctg
catcagtctggtctggctggacagaggatgcccggccttttgcctctggatgtgcgacct
aatctcctccaacctggggctgcagcccgcttccctctcctcatgcagcagggccccgcc
cagcaggctgctggcctcctcgacagttcccttcaggctcaagcccgtgccagggctcct
ttctcgcagctggaccccttcaatagggcccctaacttagctaatgaaaatgtgtccaag
acagaagatgagtcatctggagctgatgagggcaaagaccaagactaccgcttccctcca
atggaaaagcagagcactggcctgctgaggacccctccaccagagcacagggagcccctt
ggaggtggtggtggaacaggaggtggtgtaggaggcaggcctcccttactccagacccca
gggactcagccagccagaaccagcctagttggacgtctgcaggctcttgcaggcttcact
cctgataaccgctggaaccagactagaggggactttgatgaacgggacagtatgcgagga
gggttacaagccccaggtggtccaaaaggcttccaggaggagcgccccacacctgggcag
aactttcccaaccgctttgacagccgtcctgggacagctggaggagccgctggagttcca
ggaaatgctggagctgttggggggccacaggcctggaatcgtagtagtagtggtggtgct
ggagcaccttttgacagtgaactacatcaagacctagatgaccgaaggcgcccgtgggac
aggcaaagagacagagatgaaagagattttgacttcaggagggagatgaacggtaaccgt
cacagccgagagagagagcgggagcgtgagagggagagagacagggagcgaggccgagac
cgcaccagagagcatgacagagaccgcgacaaagagagagaccgcgaaagggaacgtgaa
cgtgggggctggacacctcttctccctctacctacacctctgctcccaactccacctcta
aatcccaacctgtccctgaatcaaggcaaactgctgggactactcaaattgaacccccag
attcagccccgattccagtccccactccagcctcaagctcaggctaagtcccctctctta
ggtctgaatcagccgctgcctcaggctcagattaagtctccaccaccatcacaaagccca
gcagctgtgccagagacagagtcagagaccccagccccttctgagacgcctccaacacag
tcacccacccctgcccaatcacctgacccatcatctgacgacaagagtcagagcccaatg
actgaggctcccactcaggcagagccatcaccaaaaaccgagacccctcctcaagcagaa
tccccaccccagcccatggcccagtccccatccaaaacctccgcttctcctgataatgag
acccttagccaagcctcaccgctgtttgaggcctcaacccaggaatcacctgtggccttt
gctcaagctgcaagcccccctgaagagacaactcactctctggaggagcaggaaagccca
cagaaggatgaggtggagtcacaagagggagcctcctcaccccaaccccaatgggtcaat
ggatctgggacggacaatagcactgtggctgaacccacacctgaggcctcccttgagccc
tcccctgaggcttctcctgaacccactcctgaggcttcacctgagccctctcctgagccc
tctcctgaggcttctcctgagcactctcctgatcacactaaagaacccacctccgatttg
gtgctccctgaaagtgaagtggagcagccgcaggagcagcttgcctctcctaaggacgta
gacaatgaacagagtgagcccatggaagaagctgcgagtcagccagtggtagacactgtc
acagacactgaggggacataa
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