Semicossyphus pulcher (California sheephead): 138590840
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Entry
138590840 CDS
T10596
Name
(RefSeq) AT-rich interactive domain-containing protein 1B-like
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
138590840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spul03000
]
138590840
03021 Transcription machinery [BR:
spul03021
]
138590840
03036 Chromosome and associated proteins [BR:
spul03036
]
138590840
Transcription factors [BR:
spul03000
]
Eukaryotic type
Helix-turn-helix
ARID
138590840
Transcription machinery [BR:
spul03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
138590840
Chromosome and associated proteins [BR:
spul03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
138590840
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
138590840
NCBI-ProteinID:
XP_069517335
LinkDB
All DBs
Position
Unknown
AA seq
2344 aa
AA seq
DB search
MAAQVASAPTRTNNKNKKLSSGLGPELNSGKSGGGGGGGGTVQRTGPMLGAGDGTLNNVD
HHRRNELNMVHSTSTTHTAPDGHDKDGNNLAQAPASTNSNTSSMEAGLIANHKLKCVGSG
DPPQSQPPPQQQPPPQFGQFAPHQQRQIQSNNTASNNGQGPRGDRGMDHQHHGGKENLLG
GQGEPQQQHMPGKGEGELTCKPAERMMGTRYEHSNLGPISNNSELNNNYYTPRPCYEQHG
GQQQQSSGMGITHSSTHNSMENSHEAGYHNSQYNQYPAYRAGYGGGAYGVMGPSGCRQPG
NMMMGSNSSASKSPLGAAPPGGFQRFPGQTQQQQQQQQHPSGATPTLNQLLTSPSPMMRG
YGGAYQDYGGSTAQQQGGMGLGKDLGPQYGASSAHGWGGQQRSHPHSMSPGNGGQGLGRS
QVASMDFMAMKRSQLYNMANNPYSTSQQPGGGPYPPSQTYTSPAPHRYPMSMQGRGQMTM
SGMQYPQQQQVAPYGQQGMAGYSQQQQQQQQQAGQQGTPPYFSPPQQTPPGPTQSPYLQP
RPPPQQEAQQETYGTRGPAQGNSGKANNEDGVSHDRPSSLPDLSGSIDDLPTGTEAGLGS
AVSAGGSSSSSSSSQGEQAGAGNQGQSPFSPHASPHLPSQRSGPSPSPVGSPAGSTQSQQ
SRSGSGPISPASGPSVNNTAPGSTMAPQNTGNGPDGGHPPNTRSPMAQDRGFMSNMQRNQ
ASSQFAPPQSGPPMSPHPSPGGTLYPGMGPYSQTGPSGPYGPQGSQYGHQGNYPRPSNYS
GTASTSYSGPGPGLTNSLGMNASSPMHGQGPGQPVPAGRSHGPGSQNRVYPPMAPSSPGM
PQPAGPGMGPPSLGGSNRKAQEAAATVPMPGSANSTHNSLLTPICRRPPYARSPAQTQSP
QPSSTPTHWPAPYPASACPPPSPPPRPHHPPILPPSHSQHYRPGSYQGPGINQAGTMATS
VPYSQPTGNNSSAMGNNSSAMGNAQGPTYNMPPSGAVGLSGDGMMSPDGKQKTDVKDDSG
PTNANEPHKPKQLQDGYSNNSSSSGSQQCVSQPATPGGALPVPSPLSPSPASLSSYHGDD
SDSISSPPWPLKTPSSPKPNPNSSSLGGERITRLFEMGVEPERRGWVERYLNFMEERGTP
VAQLPIVGKKPLDLWKLYIAVREIGGLAMVNKNKKWRELSTNLNVGTSSSSASSLKKQYI
QYLFAYECKMERGEEPPADNSGSVAGGDGRKQVKIQPPSPANSGGSLQGPQTPQSSGSSS
TAEAAGDLKPPTPATTPLGQVTPLLPNRSSVSVQDPFSEVSDPAFQKRATSLPPSAPYQQ
GLTMPDMMMRMQYDTKDPFAGMRKMAGADPYMPGQMPGGGMQDMYGRPPSALSMSQRSQY
PYGPGYDRRPDHVMGMEGSMGPPGGQNSMGPSNSEGSMYSPSRYSSQQRHDGYGQQFPGM
PYGMHPSGMYPQQQGYKRPMDGMYGPPPKRHESDMYTMQYANQQPDMYNHYGGGYSGPEH
RPLQGQFPFPYPRDRMAPSGQSQHSMMGGGPTPNHAADGPNMWPSRTDLGYPYPNRQGSQ
MPPYGSMGREDMDGRPGQEPWHRQSPYMSSSGGMPPLSSRQPSPYSNSPSMANHLPRAPS
PGAFQRSMDSRMSPSKAAFMSPMKMPKPGMMMGSHSSGPLGQFPPNLRRDLNYPPGSVES
TMPTLKPRRKLNSKDTGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVASFNLSQ
LPGFLELIVEYFRRCLIEIFGILEEFEVGTMAQKSLSDPAANQKEEEEAMPELETDSTVQ
PEPESAVGAETQVAQAGGVMEEAVPAAKEPESAEVKGEREESEVSIKKEENEEDGEKDGK
EESEKGAESKKECVDQPVSELEPKPKQASKYDKLPIKIVHKEDQTADMTGYVTEFTSGLL
HWQAGGGDSTAHIQTQFEPRGETTRADEKRRKDNKEENKVDDGNKQPLKHITATIDDVLC
ARVDALSYAHPARSLPSYPFRVHSDGEQDHITLLEDEPRCLDEAPLSTASAWQDSLSKRC
LCISNIVRSLSFIPGNDLDMSRHPALVLLLGRLLLLHHQHPERNRSPPSYQRDEQQEQGL
SSTKEEWWWECLGLLRENAMVTLANISGQLDLSSSPDTICLPILDGLLHWMVCPSAEAQD
PFPSTPPHSQLTPQRLVLECLCKLSIQGGNVDLLLATPPFSRQEKLFTVLVRFVGQRKAQ
VYREMAVAVLSHLAQGDPTAARAIAMQKGSVGNLVGFLEDGVSMAQYHQNTHSLLHMGHP
PMDPPSINMMCRAAKGLLAMAKVEENKTEFVLYESRLLDISISSVLNAGVVAVICQVLFH
LGKS
NT seq
7035 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaagttgcatcggctccgaccagaactaataacaaaaataagaaattatcc
agcggtttgggtccggagctcaattcggggaaatccggaggaggaggaggaggaggaggg
accgtgcagcggactggaccgatgctgggtgccggagatgggactctgaataatgtagac
catcaccgccggaacgagctcaacatggttcattcaacttccacgactcacaccgctccg
gacggccacgataaggatgggaataacctcgcacaggctccggcttcgactaattcaaac
acttcctcgatggaagcgggtttgatcgcgaaccacaagctgaaatgtgtggggagcgga
gatccccctcagtctcagccgccgccgcagcagcagccgccgccgcagttcggccaattt
gcgccacatcagcagcgacagatccaaagtaacaacaccgccagtaacaacggccagggg
ccccgtggggacagaggcatggatcaccaacaccacggaggcaaggagaacctgttgggg
ggccagggggagccacaacagcagcacatgccagggaaaggtgagggggagctcacctgt
aaacccgcggagaggatgatgggtaccaggtacgagcactccaacttgggtccaattagt
aacaactctgagttgaataacaactattacactccaaggccctgctacgagcaacatggc
ggacagcagcaacaaagcagtgggatggggataacgcactcctcgactcataacagcatg
gagaactcccacgaagcggggtaccacaacagccagtacaaccagtacccggcgtaccgg
gcgggctacggcggcggggcctacggggtgatgggcccttctggatgcaggcaacctggg
aacatgatgatgggcagcaactcctcggcaagcaagtctcctctgggtgctgctcctccg
gggggctttcagaggttcccaggacagacgcagcagcagcaacagcagcagcagcatccc
tcaggggccacgccgacccttaaccagctgctgacgtctcccagccccatgatgcggggt
tacgggggtgcgtatcaagactacggcggctccacggcgcagcagcaaggcggaatgggc
ctggggaaagacttgggaccccagtacggagccagctcggcccacggctggggagggcag
cagaggagccatcctcactccatgagtccgggaaacggagggcaaggcctcggcaggtca
caggtggcctccatggacttcatggcgatgaagcgatcgcagctctacaacatggccaac
aacccctactccacctcgcagcagccagggggcgggccttaccctcccagccagacgtac
acatcgccagctccgcacagatatccaatgagcatgcaggggcggggccagatgaccatg
agtgggatgcagtatcctcaacagcagcaggtggcgccatatggccagcaggggatggcg
ggttacagccagcagcagcagcagcagcagcagcaggcggggcagcagggaacccctccg
tacttcagcccccctcagcagaccccaccgggcccgacccagagcccctacctgcagcct
cgaccaccgccacaacaggaggctcagcaggagacctacggcacaaggggtcctgcccaa
gggaactctgggaaggccaacaatgaagatggcgtctcccatgaccgcccgtccagtctg
ccggatctgtccggctcgattgatgacctccccactgggacggaggccggtctgggctca
gccgtcagtgccggcggctcctccagcagcagcagcagtagccaaggggagcaggcgggg
gccggcaaccagggacagtcccccttctcccctcacgcttccccccacctccccagccag
aggagcgggccctctccctccccagtgggctcgcctgcaggctccactcagtcccagcag
tcacgatcaggctcgggacccatctctcctgccagcggaccctctgtcaacaacacggca
ccgggttccactatggccccgcagaacacggggaatggaccggatggaggccacccacca
aacactcgctcccctatggctcaggacagagggttcatgtccaacatgcagaggaaccag
gccagctcgcagtttgctcctcctcagtctgggcctcccatgtccccccacccctcacct
gggggcacattgtatccggggatgggtccctactcccagactggcccctcgggcccttat
ggacctcaaggatcacagtatggacaccaaggtaactacccccggccttccaactacagt
gggactgccagcaccagctacagcggtcccggccccggcctgaccaacagcctgggaatg
aacgcaagcagccccatgcatggccaggggcccggccagcccgtacctgcaggacgcagc
cacggcccaggcagccagaacagggtgtacccgcccatggctcccagctcccccggcatg
ccccagccagctgggcctgggatgggccctccttctttgggtggctctaaccgcaaggcc
caggaggcagctgcgacggttcccatgccgggatctgcaaattcaacacataacagtctg
ttgacgccgatctgcaggcggcctccgtatgctaggtcaccggcccagacgcagtcgccc
caaccctcctccacaccaacccactggcctgcaccctaccctgcctctgcctgtccacct
ccctcacctccacccagacctcaccatccacccatcctgccaccctcacattcacagcac
tataggccgggcagctatcaaggccctggcatcaaccaggcgggcaccatggctacatct
gtcccctacagccagccgacgggaaacaacagctcagcgatgggaaacaacagctcagcg
atgggaaacgcgcaaggtccaacctacaatatgccgccatcaggagctgtgggattgtcc
ggagacggcatgatgagccctgatgggaaacagaaaacagacgtaaaagacgacagcggt
cccaccaacgccaacgagcctcacaaaccaaagcagcttcaggatggctacagcaacaac
agcagcagcagtggctcccagcagtgtgtgtcccagcctgccacgccaggcggtgccctg
cccgtgccctcccccctctcaccaagccctgccagcctgtcatcgtatcacggggacgac
agcgacagcatcagcagccccccctggcccctcaagaccccctccagtcctaaacccaac
cctaactcctcctccctgggtggggagcgaatcacgcggctgtttgagatgggtgtggag
ccagagaggcggggctgggtggagcgatacctcaacttcatggaggagaggggcacgcct
gtcgcacagcttcctattgtgggcaagaagccgctggacctgtggaagctctacatagca
gttcgggagataggaggcctcgccatggtaaacaagaacaagaagtggcgcgagctctcc
accaacctgaacgtcggcacatccagcagctcggccagctcgctcaagaagcagtacatc
cagtatctgtttgcctacgagtgtaagatggagaggggagaggagcctccagcagacaac
agtggcagcgtggctggaggagatggcaggaagcaggtcaagatccagccgccctcacct
gctaattcaggcggctccctccaaggcccgcagacgccccagtcctctggcagcagctcc
acagcggaggcagcaggggatctgaaacccccaacacctgccaccacgcctctgggacag
gtcacacccctgcttcccaacaggagcagtgtgagtgttcaggaccccttctcggaggtg
agcgacccggccttccagaagcgtgctacctctctgcccccctccgctccgtaccagcag
ggcctaaccatgcctgacatgatgatgaggatgcagtacgacaccaaggatcccttcgcc
gggatgaggaagatggcaggagctgatccctacatgcccggtcagatgcccggcggtggt
atgcaggacatgtatggtcgacccccgtcagccttgagcatgagccaacggtcgcagtac
ccatacgggccaggctatgaccggagaccggaccatgtgatggggatggaggggagcatg
ggtccccctgggggtcagaacagcatgggaccttcgaacagtgagggcagcatgtactct
cccagtagatactcttcacagcagagacatgacggctacggtcagcagtttcctggcatg
ccatatgggatgcatccgtcagggatgtacccacagcaacagggctacaaacggcccatg
gacggcatgtacggccccccacccaagaggcacgagagcgacatgtacaccatgcagtac
gccaaccagcagccggacatgtacaaccactacggaggagggtactccggccctgaacac
agacccctccaggggcagttccccttcccctacccccgagaccgcatggccccctcgggt
cagagccagcacagtatgatgggcggggggcccactcctaaccacgccgccgatggcccc
aacatgtggccctccagaacagatctcggatatccctaccccaacagacagggatcacaa
atgcctccttacggctcgatgggcagagaagatatggacgggcggcccgggcaggagccg
tggcaccgtcagtctccctacatgtcatcatcaggcggcatgccccccctgtcgtcacgt
caaccatctccttattccaactctccatccatggccaaccacctgccccgagcgcccagc
ccgggggccttccagcgctccatggactctcggatgtcgcccagcaaagcagcgttcatg
tcgcccatgaagatgcctaagcccgggatgatgatgggctcacatagcagcggacccctc
ggccagtttcctcccaatctgaggcgggacctcaactaccccccaggatcagtggagtcc
accatgccgaccctgaagccgcgacgcaagctgaattccaaggacaccggaacgcctgag
gcctggcgcgtgatgatgtctctgaagtcgggcctgctggcagagagcacatgggctcta
gacaccatcaacatcctgctgtacgatgacagcaccgtggcctcctttaacctctcccag
ctgcctggattcctcgagctgatcgtcgagtatttccgccgttgcctgatcgagatcttc
ggcatcctggaagagtttgaagtaggaaccatggcccagaaaagcctttcagaccctgct
gctaaccagaaagaagaagaagaagccatgcccgagctggaaacagactctactgtccaa
cctgaacctgagtctgctgtgggagcagagacacaggtggcacaagcaggaggcgtcatg
gaggaagccgtaccggccgctaaagagccagagtcagctgaggtgaaaggtgaaagggag
gagtcagaggtgagcataaagaaggaggagaatgaagaggacggagagaaagatggaaaa
gaagagagtgaaaaaggagcagagagtaaaaaggagtgtgttgatcagcccgtctcagag
ctagaacctaaacctaaacaagccagtaaatatgataagctccccatcaagattgtccac
aaagaggaccagactgcagacatgacaggctacgtcactgagttcaccagtgggttgctg
cactggcaggcaggtggaggtgattccactgcacacattcaaacacagtttgaaccccgg
ggtgaaaccaccagggcggatgaaaagaggagaaaagataacaaggaggaaaacaaggtg
gacgatgggaacaaacaaccactgaaacacatcacagctactatcgatgatgtcctgtgt
gcgcgagttgacgccctttcttacgcccaccctgcgcgctccctaccatcgtaccccttc
agggtgcattcagacggggagcaggaccacatcaccctgctggaggatgagccccgctgc
ctggacgaggctccgctctccacagcctccgcctggcaggactcgctgtccaagcggtgc
ctctgcatctccaacatcgtccggagcctctccttcatccctgggaacgacttggacatg
tcgcgccaccctgcgctggttctccttctgggcaggctgctcctgctgcaccaccagcac
ccggagaggaacaggtcgccccccagctaccagagagacgagcagcaggagcaggggctg
tcgagcaccaaagaggagtggtggtgggagtgtctgggtctgctcagggagaacgccatg
gtaacgctggccaacatctcaggtcagctggatctctcctcctcccccgacaccatctgc
ctccccatcttggacggcctcctccactggatggtgtgtccttcagctgaagcccaggac
cccttcccgtcaactccaccccactcccagctcacgccccagaggttggtgctggagtgc
ctctgcaagctgagcatccagggcggcaacgtggacctcctgctagctacgcctcctttc
agccggcaggagaaactcttcaccgtgttggtccgcttcgtgggtcagaggaaggcgcag
gtgtacagggagatggccgtggctgtcctctcccacctggcacaaggagaccccacagcg
gcacgtgccatagccatgcagaagggcagcgtgggtaatctagtaggcttcctggaggat
ggtgttagcatggcgcagtaccaccagaacactcacagcctgctgcacatggggcaccca
cctatggacccaccaagcataaacatgatgtgcagagcagctaaaggcctgttagcgatg
gctaaagtggaggagaacaagacagagtttgtgctgtatgaaagcagattattagacatc
tccatttcctcggtgctcaatgcgggagtggtggccgttatttgccaagttctctttcac
ttagggaaatcatga
DBGET
integrated database retrieval system
