Semicossyphus pulcher (California sheephead): 138590860
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Entry
138590860 CDS
T10596
Symbol
chd9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
Chromosome and associated proteins [BR:
spul03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
138590860 (chd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138590860
NCBI-ProteinID:
XP_069517373
LinkDB
All DBs
Position
Unknown
AA seq
3017 aa
AA seq
DB search
MDFFNDPNLFVGGLEGLDEEHFPSAPSLVDELNLSADFEPLQVGPLGPGKHQDMMPPVST
QQAMPVYGEEMGHYIGMKGQNPMGQVFSGPGSTGGGGSGMIADQHGQYHNAAMGQAPLSN
GLFCNSSSPMWGNQDQNGNMYHPLAQQQQHQQRQLCHQQQQLHNQQLHVRQPQTQQQQHH
PGHHPQQQQQQLHPQQSHRQQLLSQQQHHQMNTQTLSLQQQQHHNFSFHQGGQSQSQPQV
HHTQQVHHQLTIGGPRYHSRALPSKPYLNHQSASVSGTCLQPQQQQGNYQLTRGGQAFSG
SGPEDPHLTFPMHSSSMVHSMPTCAVTSATAYQPAQYPSYPGEPEIPTHSQQPLSTASAA
RLASTTTAPLSSTVPELSGTVRQFPSTAVMSQQHTRAPVSQAEECPFQALRCSGETQGNC
KSSEMFGESMSCYPSMINQLPSEQPQSCGAINTNGYPALGDNLLQSQAQGGDLEGLEPPD
LLPDLMPQLEAALSQQDESNCSWADSSQERGDEHRKPPPVEYKGGKPRKNANGPSSQVRV
LSPPMKSSSSSSSSSSSSSSSSSSPSEKRTQRRTHHQMESCIQDKQEKANRIISEAIAKA
RQRGEKNIPRVMSPESFPSSSSQHKSHRDREHKGNRKARPKEKACRKVCIVPSSKPKQKA
KIGKIVIKIGKKKKRKPESSEESDDDPPPRHTSKDVDSKRRSNRQVKRKKYAEELEARLS
DEEVKVIVKAKKATAASKQPSLQLFVENPSEEDAAVVDKIMSSRVVKNEVSPGMVIEVEE
FFVKYKNYSYLHCEWATEQQLEKDKRIQQKIKRFKMKQAQRALFFADMEEDPFNPDYVEV
DRVLEVSYCEDKDTGEEVVYYLVKWCSLPYEDSTWELKDDVDQSKIEEFELLQAVKPDSR
RMERPPANHWKKREQSREYRNSNSLRDYQLEGVNWLLFNWYNRRNCILADEMGLGKTIQS
ITFLEEIHRVGIKGPFLIIAPLSTIANWEREFRTWTYLNVIVYHGSMVSRQMLQQYEMHF
RDAQGRAIRGAYRFQAVITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGFKL
MSLEHKVLLTGTPLQNTVEELFSLLHFLEPARFPSENTFMQEFGDLKTEEQVQKLQGILK
PMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLAKGAGQANMPNLVN
TMMELRKCCNHPYLIKGAEEKILEDFREVYSPTAMDFHLQAMVQSAGKLVLIDKLLPKMK
AGGHRVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSERFVFL
LCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYERE
MFDRASLKLGLDKAVLQSMSGRDNSLGGGTGGGAAQQQLSKKEIEDLLRRGAYGAIMDEE
DEGSKFCEEDIDQILQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWDKWAK
KADIDMEMVNGRNSLVIDTPRVRKQTRPFSATKDELAELSEGESESDETKPKLRRNHDRL
NSYGRTECFRVEKNLLVYGWGRWKDILNHGRFKKQLTEWDVESICRALLSYCLVHYRGDD
KIKGFMWDLIAPTEDGQTKELQNHLGLSAPVPRGRKGKKMKTQSSSFDIHKAEWLRKHNP
EHMLQDDGYKKHLKHHCNKVLLRVRMLYYLKQEVIGSQAQNVLDGADASEIKIWVPDPDH
SELPALWWDAISDKCLLLGVFKHGYEKYNTIRADPTLCFIERVGRPDEKAIAAEQRGNDF
MDGDVDDPEYKPAPALIKDDMEDDASSPGDLVVTDNAGDAVPVPGGSTVYWPSSSVLTAR
LRRLITASQRFTKSRQILHIHQTQSQTQPTMILSAPLCPLPPTLNDTLNPKMAAKIERQQ
RWTRREEADFYRVVSTFGVVFDPNLGRFDWTKFRAMARLHKKTDESLQKYLCAFTAMCRR
VCRLPPKEGDSAVDPSLTIQPITEERASRTLYRVELLRQVREQVLRHSLLYERLPLCQMS
SDLPVWWEAGTHDRDLLVGAAKHGVSRTDYHILRDPELSFMAAQRNYSQTKATQQQTRTP
TPLLPPQCQTTSSVVTGSPLPPPAQRDSEPGGVVPKVEPASEGEEGREKPGESWSPPRAP
ATPTGLEEKPVTEAKDSEKKMVAARTKPLTPNSSERKPKKASKRSRREARRGSESDSDGS
SSSSSSRSSSSSSSSSSSSSHSGSSSSSSSSSCSSGSSSSSSSSSSSSDDSDSEGENGKK
KVPAVASVKGFDEDSVASLSTTQDETQDTHVAENGINNSSHPFQGGGYMLAASYWPKDRV
IINRLDSICQAVLKGKWPGTRRVYEPGGAVASFYTTKLLDNANSLCEDPSASPQGSKVTK
HVAENKEFSVKLNDQEGGLKLTFQKQGLPLKRPLDSEEGPQAQQQYLARLHELQSASDTG
LADITKPQCSFQTAPQDLTGQMRLNGALEGQPVVKRRRGRRKNVEGMDLLFMNRSRVPAV
HDQVPPGWGGIGQVGIAVAPVPGFSQSAVQAPADTDSRVPVINLKDGTRLAGEDAPRRKD
LDMWLKEHPGFVADTGAFIPGVNKMQMQFHFQDGRPKQKRHRCRNPNKIDVNSLTGEERV
QIINRRNARKVGGAFAPPLKDLCRFLQENPEYGVPPEWADVVKQSGYLPESMFDRILTGP
IVPEEVSRRGRRPKNPLAKAAAAAAAAAAAAPNPAVSALGLNPLLANGLLSGMDLTSLQA
FQQNLQSLQSLQLTAGLMGLPSDASNLAASNLAAMFPMMLSGMAGIPNILGMSSLLGKPA
QEGTGSSEEKTKGTISGVTGELSASKAHSHTSDTKGERTEGLNTTPSSTSSSSSSATAPQ
SASAASAASSHPLSLNPLLLSSMLYPGMLLTPGLNLPVSATQPQSSDSDPTLPPAPLPPQ
PAASQSLPQKTELPAADKDGEEDEEELEEALDEDEEEESAEQKENSGPEGSGKAESSSSE
SGSSSSSSDDSDSSDED
NT seq
9054 nt
NT seq
+upstream
nt +downstream
nt
atggacttctttaatgaccccaacctctttgttgggggtttagaagggctggatgaggaa
cacttcccctcagcaccatcactcgtggatgagctaaacctcagtgctgactttgagccc
ctccaagtggggcctctaggcccagggaagcaccaagacatgatgccaccagtttcaacc
caacaagccatgcccgtttacggtgaggagatgggtcactacattggcatgaagggacag
aatcctatggggcaggtgttttctggtcctgggagcacaggtggtggaggcagtggcatg
attgcagatcagcatggccagtaccacaacgcagccatgggccaagcccctctatccaat
gggctgttctgtaacagtagcagtccaatgtggggaaaccaagaccagaatgggaatatg
taccaccccttagctcaacagcagcaacatcagcaacgacagctttgtcatcagcagcag
caactgcacaaccagcaactacatgtccgacaaccacaaacacagcaacaacaacaccac
ccgggtcaccatccacaacagcagcagcagcagctgcatccacagcaaagtcatcggcag
cagctgttaagccagcaacagcaccatcagatgaacacacagactttgtccctgcagcaa
cagcaacatcataatttctcctttcaccagggaggtcaatctcagagccaaccgcaagtt
caccacactcagcaggttcaccaccaactaactataggaggaccaaggtatcattcaagg
gctctaccaagtaagccctatttgaatcatcaaagtgcttctgtgagtgggacatgctta
caaccacagcagcagcagggtaactaccagttgaccaggggaggtcaagccttctctgga
tcaggacctgaagaccctcacctgaccttccccatgcattcttcttctatggttcactcc
atgccaacatgcgcagttacctctgctactgcttatcagccggctcagtacccttcctac
ccgggagagccagaaatacccactcatagtcagcagcctttgtccactgcctcagcggct
aggctcgcctccaccaccactgcacccctctcttctacagtgcctgagctatcggggaca
gtacgtcagtttccatccacagctgttatgagtcagcaacacactcgggccccagtcagc
caggcagaggaatgtcctttccaggccctccgttgttctggagaaacccagggaaactgc
aagtcatctgagatgtttggcgaatctatgagctgctaccccagcatgatcaaccaactg
ccctctgagcagcctcagagctgcggggccatcaacactaatggatacccagcactggga
gacaatctcctgcaatcacaggctcagggtggagacttggaaggcctggagcctcctgac
ctcctgcctgacctaatgccccagctggaagctgctctcagccaacaggatgaatccaac
tgttcttgggccgactccagccaggagaggggagatgagcataggaaacccccacctgtt
gagtacaagggagggaagcctcgaaagaatgctaatggccccagcagccaggtacgggtc
ctgagtcccccaatgaagagcagctcatcgtcctcatcctcttcctcatcttcttcatcc
tcatccagctccccgtcggagaagaggacgcagcggaggacgcaccatcagatggagtca
tgcatacaggacaagcaggagaaggccaatagaataatatccgaggctattgctaaggcc
cggcagcgcggggagaagaacatccccagagttatgagccccgagagcttccccagctct
tcgtcgcagcacaagagccaccgtgaccgcgagcacaaaggaaaccgtaaggcacggcca
aaagagaaggcctgtaggaaggtctgcattgtaccctcctcgaagcccaagcagaaggcc
aagatcgggaaaattgtcatcaagattgggaagaagaaaaaacgaaagcctgagtcctca
gaggagtcggatgatgaccctccccctcgacacacttctaaagatgtcgactctaagagg
cgatctaatcgccaggtgaagagaaagaaatatgctgaagagctggaggccaggttgtca
gatgaggaagtcaaggttattgtgaaagccaagaaagccactgcagcatccaagcagcct
tctcttcaactctttgtagagaatcccagtgaggaggatgctgcagttgttgacaaaatc
atgtcttctcgtgtcgtcaaaaatgaggtctctccgggcatggtgatcgaagtggaggag
ttttttgtaaaatacaaaaactattcctacctacactgtgagtgggccacagagcagcag
ctggagaaggacaagaggattcagcagaagatcaaacgtttcaagatgaaacaggctcag
agggcactcttctttgcagatatggaagaggacccctttaaccctgactatgtagaggta
gacagagtactagaggtgtcatattgtgaggacaaagacacaggagaggaggtggtatac
tacctggtgaagtggtgctctctgccttatgaggacagcacctgggagctgaaagacgac
gtggatcagagcaagattgaggagtttgagctgctgcaggcagtcaagccagactcgcgc
aggatggagcgacccccggccaatcactggaagaagagggagcagtcgagggaatacagg
aacagcaacagcctcagggactaccagctagagggggtcaactggctcctcttcaactgg
tacaacagacgaaactgcatcctggcagacgagatgggcctgggaaaaaccatccagtcc
atcacattcctagaagagatccatcgcgtgggcattaaagggccattcctcatcattgcc
ccgctctctactatagccaactgggagcgcgagttccgaacttggacctatctcaatgtc
atcgtgtaccatggaagcatggtcagcaggcagatgctccaacagtatgagatgcatttc
agggatgcacagggccgtgcgatacgaggtgcctacaggttccaggctgttatcaccact
tttgagatgatcctgggaggatgtcccgaactcaacgccatcgagtggcgctgtgttatc
atcgacgaggcccaccgcctcaagaacaagaactgcaagctgctagaaggcttcaagctc
atgagcctggagcacaaagtcctgctgacaggtacccctctccagaacactgtggaggag
ctcttcagcctgctccacttcctggagccggcacgtttcccctcagaaaacaccttcatg
caggagtttggagacctaaagactgaggagcaggtacagaagcttcagggcatcctgaag
cccatgatgctgcgtagattaaaggaggatgtggagaagaagctggctcctaaggaggag
acgatcattgaggttgagctcacaaatattcagaagaaatactaccgcgccatcctggag
aagaacttctctttcctggctaaaggagctggtcaggcaaacatgcccaacctggtcaac
accatgatggagctgagaaagtgctgcaaccacccctacctcatcaaaggagcagaggaa
aagatcctggaggacttcagggaggtgtatagccccactgccatggactttcacctgcag
gctatggtgcagtctgcagggaagctggtccttattgataagctgctgcctaagatgaaa
gccggggggcacagagtgctcatcttctcccaaatggtgcgctgcctggacatcttggaa
gactacctcattcagagaaggtacttgtatgagcggatagatggacgtgttcgagggaac
ctgcggcaggcagcgatcgaccgcttcagtaagcctgactcagagcgcttcgtttttctc
ctgtgtacaagagctggtggcctgggaatcaacctcacagcagcagacacgtgcatcatc
tttgactctgactggaacccgcagaacgacctgcaggcccaggctcgctgccatcggatc
ggtcagaacaaggcagtgaaggtgtaccgtctgatcaccaggaactcgtacgagcgagag
atgtttgatcgcgccagcctcaagctgggcctggacaaagcggtgctgcagagcatgagt
ggccgagataacagcctgggaggaggcactgggggaggggcagcgcagcagcagctgtcg
aagaaagagatcgaggatctgctgcgacgtggtgcatacggggccatcatggatgaggag
gacgaagggtccaaattctgtgaggaggacattgaccagattctccagcgcagaacaaag
accatcaccatcgagtctgagggacgagggtccacctttgctaaggctagttttgtggcg
tctggaaaccgcacagacatttctctggatgaccccaacttctgggacaaatgggccaaa
aaggctgatattgacatggaaatggtcaatggcagaaacagcttagtgattgacacccct
cgtgtcagaaagcagaccaggccgttcagcgccaccaaggatgagttagccgagctttca
gagggggaaagcgagagtgacgagaccaaacctaagctcaggcgaaaccacgaccgcctc
aacagctatggccgcacagagtgcttcagagtagagaagaacctgcttgtttatggatgg
ggtcgttggaaagatattctcaaccacgggcgatttaagaagcagctgacggagtgggat
gtggagtccatctgcagggctctgctgtcttactgcctggtccattaccgtggagatgac
aaaattaaaggcttcatgtgggacctgatcgcccctactgaggacggacaaaccaaagag
ctgcagaaccacctgggtttgtctgccccagtccctcggggcaggaagggaaagaagatg
aagacccaatcgagctctttcgacatccacaaagctgagtggctgaggaagcacaaccca
gagcacatgcttcaggacgacggctacaagaaacacctcaaacaccactgcaacaaggtg
ctgctcagggtcagaatgctctactacctgaaacaagaggtgataggaagccaggcccag
aatgtgctggacggcgcggacgccagtgagataaagatctgggtgccagatcccgaccat
tcggagctgccagccttgtggtgggatgccatctctgacaagtgtctgttgctgggtgtc
tttaagcatggttatgagaagtacaacactattcgtgcagacccgaccctgtgcttcata
gagcgcgtgggacgaccggatgagaaggccatcgctgccgaacagagaggcaatgatttc
atggatggggatgtggatgatccagagtacaagcctgctccggccttgataaaggacgat
atggaggatgacgcctcttcacctggagacttggttgtcactgacaatgctggagatgca
gttccagtgccaggggggtctactgtctactggccctcatcgtctgtgctgacagccaga
ctgaggcgtctgatcacagcctcgcagcgcttcacaaagagtcggcagatcctccacatc
caccagactcagtctcagactcagccgaccatgatactgtccgctccactctgccccctg
cccccaactctcaatgacaccctgaaccccaagatggcggccaagattgaacgccaacaa
agatggaccaggcgggaagaggccgacttctaccgagtggtctccacctttggtgttgtt
tttgaccccaatcttggtcggttcgactggaccaagttcagggcgatggctcggctgcac
aagaagactgacgagagcctgcagaaatacctgtgtgcttttaccgccatgtgccgaagg
gtgtgtcgcctgccacccaaagaaggagactctgcggtggacccgtctctgaccatccag
cccatcacagaggaacgagcgtctcgtaccctgtacagggtagagctgctccgccaggtg
agggagcaagtcctccgccattcattactctatgagcgcctgccactgtgccagatgagc
tctgacttacccgtgtggtgggaagccggtactcatgaccgtgacctgctagtcggtgct
gccaagcatggcgtcagccgcacagattaccacattctgcgagaccccgagctcagcttt
atggctgcccaacgcaactacagccaaacaaaagctacacagcagcaaacacgcacaccc
accccgcttctaccccctcagtgccagaccaccagctcagtggtgacaggctctccactg
cctccacccgcccagagggactcagagcctgggggagtcgtgcccaaagtggaaccagcc
tcagaaggagaggagggcagggagaagccaggggagagttggagtcctccccgagcaccg
gctactcccacaggtctagaggagaagcctgttaccgaggcgaaggacagtgaaaagaag
atggtggcggcacgaacaaaacctctcacccccaactcctctgagaggaaacccaagaag
gccagcaagagaagccgccgggaggccaggcgaggctcagagtccgactcggatggctcc
tcctccagctcttcgtcgcgctcctcttcctcttcatcctcctcgtcttcttcttcgtca
cattccgggtccagctcctcctcctcgtcttcgtcttgttcctctggctcctcgtcatca
tcatcgtcctcttcatcttcttctgacgatagtgacagtgagggagagaacgggaagaag
aaagtgcctgcagtagcaagtgttaaaggcttcgatgaggacagtgtggcgtctctgagc
actacacaggatgaaacacaagacacccatgtggcagaaaacggcatcaacaactcctca
caccccttccagggaggagggtacatgctcgctgcatcatactggccaaaggatcgtgtg
atcatcaaccgcctggacagcatctgccaagcagtgctaaagggcaagtggccaggaaca
cggcgggtctacgagcccggaggcgcggtggcctccttctacaccaccaagctgctggac
aacgccaacagcctgtgcgaggacccctctgcctcaccacaggggtcaaaggtgaccaag
catgttgcagaaaacaaggagttctcagtaaaactgaacgatcaggagggaggtctcaag
ctgaccttccagaaacaaggtctacctctgaagaggcccctggactcggaggagggtccc
caggcccagcagcagtacctggcccggcttcatgagctgcagagcgcctcggacacgggc
ctggccgacatcaccaagcctcagtgcagcttccagactgcgcctcaagatcttactggt
cagatgaggctgaacggagcactagaaggccagcccgtggtaaagaggcgaaggggaagg
aggaagaatgtggaggggatggacctgctcttcatgaacaggagtagagtccctgctgtg
catgatcaggtgcctccagggtgggggggtattggccaggtgggcattgcagtggccccc
gtgccgggcttcagccagagcgccgttcaggcccctgcagatacagacagcagagtccct
gtcattaacctcaaagatggcacccggctggctggggaagacgcaccgaggaggaaagat
ctagatatgtggctaaaagagcaccctggctttgtggcagacacaggagccttcatccct
ggggtaaataagatgcaaatgcagttccacttccaggacggtcgacccaagcagaaaagg
caccgctgcaggaaccccaacaagatagatgtgaatagcctgacgggagaagaaagggtg
cagatcatcaacaggaggaatgcacgcaaggtcggtggagcctttgctcctcctctgaag
gatctgtgccgcttccttcaggagaaccccgagtacggagtcccacctgaatgggctgat
gttgtcaaacagtcgggttacctcccagagagcatgtttgacaggatcctaacaggaccc
atcgttcctgaggaggtgagccgacgtggacgccgacctaaaaatccactggccaaggca
gcagcggcagccgccgccgcggcagcagcagcaccaaacccagcagtctcggccctgggt
cttaaccccctgctggccaacggcctcctctctggaatggacctgaccagcctgcaggcc
ttccagcaaaacctccagagcttacagtccctgcaactcaccgcaggcctaatggggctg
ccgtccgatgccagcaacctggctgcgagtaacctggctgccatgtttcccatgatgctg
tctggtatggctggaatcccaaacatccttggcatgagcagcttgcttgggaagccagct
caggagggcacaggaagctctgaagagaagacaaagggaaccatcagcggtgttacagga
gagctgtcagcctctaaagcccactctcacacctcagacaccaaaggagaaaggacagag
ggcttgaacacgactccttcctccacttccagctcctcttcctctgccaccgcaccacaa
agtgcttcagctgcctctgcagcctccagtcacccactgtctcttaaccccttgttactc
tccagtatgctctacccagggatgcttctcactccaggccttaacctccctgtgtctgcc
acacagccgcagagctcagacagtgaccccacccttcctcctgctcctcttcctcctcag
cccgcagcctcccagtcgttgccacagaagaccgagctgccagcggcagacaaggacgga
gaggaggatgaagaggagttagaagaggctttggacgaagacgaagaagaggagtcagcg
gaacaaaaagagaacagtggtcctgaaggttcggggaaagccgagtcatcttcatcagag
tctggtagctcttcttcctcatcagacgattcagactccagtgatgaggactga
DBGET
integrated database retrieval system
