Semicossyphus pulcher (California sheephead): 138590912
Help
Entry
138590912 CDS
T10596
Symbol
srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03013
Nucleocytoplasmic transport
spul03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138590912 (srrm1)
03015 mRNA surveillance pathway
138590912 (srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spul03019
]
138590912 (srrm1)
03041 Spliceosome [BR:
spul03041
]
138590912 (srrm1)
Messenger RNA biogenesis [BR:
spul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
138590912 (srrm1)
Spliceosome [BR:
spul03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
138590912 (srrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
138590912
NCBI-ProteinID:
XP_069517444
LinkDB
All DBs
Position
Unknown
AA seq
859 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLDKKVDMTKVNLEVIKPWITQRVTEIL
GFEDDVVIEFIFNQLEEKHPDSKMMQINLTGFLNGKNAREFMKDLWPLLLSAQENIAGIP
SAFLEQKKEEIKQRQIEQEKLASLKKIDEDKKDIRERAQSKSPRRRKTRSPSPRRRSPLK
RERKRSASRSPRRKPSPVGGSSPPPPLMQLPTKPLEQLVEPETSERAMPEPVIQETSSAC
DTVVEVVKADTVTEVKEPSPEKTLKKEERPRSREREKDSRRERPHHRSRSHSRSRRRRSR
SRSYSPRRRPSPRRRMSPRRRSPPRRGPTGSRHRHRRSPVRRRRSRSASSSGSSSSGSRS
PKKAMKRISNTPPRKQVHHPDPSFSPAGKDRRSPSPRARRGRGSASPARSSGLKRKQGGR
SDSPSDNAKPRPSEGSDSEEDKNEKGATADSVQQRRQYRRQNRQSSSDTGSSSSDEEGPK
RPMAGPGARNGEVRRRRSRTPSPRRRHRDVSPRKRRSPSPGRRRRSPSPPRRRRSPSPPR
RRSPSPPPRRRSPSPRRYSPPIQRRYSPSPLPPQKRRMSMSPAKRSPPGPKRRLSRSPKR
RSSPAQRRRSPPSSSSPPRHRRSPMLQSVRPSRDTRSPIAAASRLSPSPAKRSRNVRGST
SPQGRYETSNASPSNQRRQQSPSHSGKPIRRVSRTPEPRNNQRPSPSPQPLRRASSRSRS
VSPQPAAQKRPAPASASPSPSHSASGSPPPAKKPSSGSASQSPSKNSDVDGSGKKKKKKK
EKKHKKEKKHKKHKKHKKEKSGGTVTGDGQENQGVEEDGESRKESDSEVEDSLDDLEKHL
REKALRSMRKAQMSPSQMS
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggtacgagtgcggagcaagacaatcgtttcagcaacaag
cagaagaaactgctgaagcagctgaaatttgcagaatgtctggacaagaaggtggatatg
accaaagtgaacctggaagtcatcaaaccttggataactcagcgagtgacagagattctg
ggatttgaggatgacgtcgtcatagagttcatatttaaccagcttgaggagaagcaccca
gatagcaagatgatgcagatcaacctgacaggcttcctgaatgggaagaatgcccgggag
ttcatgaaggacctgtggcccctgctgctgagtgcccaggagaacattgcaggaatccct
tctgcttttctggaacagaagaaagaggaaattaaacagagacagattgagcaggagaaa
cttgcttctctgaagaagattgatgaggacaagaaggacatcagagagagggctcagtca
aagagcccaaggaggcggaagacaaggtcaccgtcaccgcgacgaagatcgccactgaag
cgtgaaaggaaacgtagtgcatcgcgctccccaaggcgtaaacccagcccagttggcggc
agttcaccccctccacccctgatgcagttgcccacaaaacctttggagcagcttgtggag
ccagaaacgtcagaaagagccatgccagaaccagtcatccaagaaacatcttccgcttgt
gacacagtagtggaggtggtaaaagcagatactgtgaccgaggtcaaagaaccctcacca
gagaagactctcaaaaaagaggaaaggcccaggtcccgggaaagggagaaagacagcaga
agggaaagacctcatcaccgttctcgttctcattcccgctctcgacgacgacgctcccgt
tcaagatcgtactcccctcgtagaagaccgagtccaaggaggagaatgtctccccgtaga
aggagccctcctagacgtggccccactggctccagacacagacatagacgctcccctgtt
cgcaggaggcgctctcgctctgcttcatcctctggcagcagctcctctggctctcgctca
cctaaaaaagcaatgaaaagaatatctaacacaccaccccgaaaacaggtccatcaccct
gacccctcctttagccctgcggggaaggacagacggtctccatctccacgggccagaaga
ggcagaggctctgcatcaccagccagatcatctgggttgaagcgaaaacaaggaggaagg
tctgattccccatctgataatgctaagcccagaccttctgaggggtctgattcagaggag
gataaaaatgagaaaggggcaacagcagattcggtgcagcagcgacgtcagtatcgcaga
cagaatcgtcagtcttcttcagatacagggtcttcgtcctcagatgaagaggggcccaag
aggccaatggcaggaccaggtgcaagaaatggtgaagtcaggaggagacgcagccgtacc
ccctccccgcggaggagacacagagatgtctctccgaggaaaagacgttctccatctcct
ggacgcagacgtcgctcaccttctcccccacgtcgtcgcagatctccttctcctcccaga
cgaaggtctccttccccacctcctcgtcgtcgttctccatcccccagacgatattctcct
cctatccagcgtcgctacagcccatcacctttgcctccacagaaaaggaggatgtctatg
tctcccgcaaagcgatcgcctccaggacctaagcgccggctctccaggtcccccaagcgc
agaagttctcctgcacaaaggagacgctcacctccatcctcttcgtctccccccagacac
agaaggagcccaatgttgcaatcagtaaggccaagcagggacacaagatcccccattgca
gcagccagtcgcctctccccatcccctgctaaacgcagtcgcaatgttaggggttccacc
agtccgcagggacgttatgaaacctccaatgcatctccatctaaccagcggagacagcag
tctccttcacacagtggcaaacccatccgcagagtctctcgcacaccagagccacgcaac
aaccagagaccatctcccagtccccagcctttgaggagagcatcttctagatccagatct
gtttcccctcaaccagcagctcagaaacgtccagccccagcatctgcctccccctcacca
tctcactcagccagtggttctccacctccagccaaaaagcctagcagtggttcagccagt
caatctccaagcaagaattcggatgttgatggaagtgggaagaaaaagaaaaaaaagaag
gaaaagaaacacaagaaagagaagaaacacaagaagcacaagaaacacaagaaggagaaa
agtggtggcacagtgactggagatggacaagagaaccagggtgtggaggaagatggagag
tcaagaaaggaatcagacagtgaagtagaggacagcttggatgatctggaaaagcacctc
cgggagaaggccctgcgctccatgaggaaggcccagatgtctccatcacagatgtcctga
DBGET
integrated database retrieval system
