Semicossyphus pulcher (California sheephead): 138591081
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Entry
138591081 CDS
T10596
Symbol
vps39
Name
(RefSeq) vam6/Vps39-like protein isoform X1
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul04140
Autophagy - animal
spul04148
Efferocytosis
spul05132
Salmonella infection
Brite
Membrane trafficking [BR:
spul04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
138591081 (vps39)
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Paralog
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Other DBs
NCBI-GeneID:
138591081
NCBI-ProteinID:
XP_069517692
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Position
Unknown
AA seq
876 aa
AA seq
DB search
MHDAYEPVPILEKLPLQIDCLAAWEDWLLVGTKPGHLLLYRIKKDAGTNRFEVTLEKSNK
NFSKKIQQLYVVSQYKILVSLLENNIHVHDLLTFQQITVLSKAKGATLFACDLQQTSSGE
ERLRMCVAVKKKLQLYFWKDREFHELQGDFGAPDIPKSMAWCENSICVGFKRDYYLIRMD
GRGTIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGVCTQKCALNWTDIPIAME
HQPPYIIAVLPRYVEIRTVEPRLLVQSVELQRPRFITSAGPNIVYVASNHFVWRLVPVSI
ASQIRQLLQDKQFELALQLAKMKDDSDGDKKQQIHHIQNLYAFNLFCQKRFDDSMQVFAK
LGTDPTHVIGLYPDLLPSDYRKQLHYPNPLPTLSGAELEKAHLALIDYLTQKRSHLVKQL
NDSDPSTTSPLMEGTPTIKSRKKLLQIIDTTLLKCYLHTNVALVSPLLRLENNHCHIEES
EYVLKKAHKYSELIILYEKKGLHQKALQVLLDQSTKANSPLKGHERTVQYLQRLGVENLG
IIFEFSPWVLKICPEDGLKIFTEDLIEVETLPREKVLNFLKEGFKELAIPYLEHIIYVWD
DKGPEFHNVLIQLYLERVQGLMKQYLNSLPEGVPAVAAGKEEGDLGEFRNKLLSFLDIST
SYEPARLISDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTRMAEEYCHRHYSSSVE
GDKDVYLSLLRMYLSPPDVHCLGPIKMELSEPQANLQAALHVLELHHSKLNTTKAINLLP
ANTQIREIRVFLESVLEEKAQRKRCNQVLKSLLQAEFLRVQEERIFHQQVKCVITEEKTC
RVCKKKIGNSAFARYPNGVVVHYFCCKDRNVCPTEQ
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgcatgacgcgtatgaaccagtgcctattttggaaaagcttcctcttcaaattgactgc
cttgcggcctgggaggattggctgctggtgggaacaaagccagggcatctccttctctat
cggataaagaaggatgcaggcaccaaccggtttgaggtgacactggaaaaatccaataag
aacttctcaaagaagattcagcagctctatgtcgtctcgcagtacaaaattcttgtcagt
cttctagagaacaacatccacgtccatgacctcttgaccttccagcagatcactgtcctg
tccaaagctaaaggagccacgctcttcgcctgtgacctgcagcaaaccagctcaggagag
gaaaggttgagaatgtgtgtcgcagtgaaaaagaaactccagctgtatttctggaaggac
agagagttccacgagctgcagggggactttggagctccagatattccaaagtccatggca
tggtgtgaaaactccatatgtgttggtttcaaacgagactattacctcattcggatggac
ggtcgtggcaccatcaaggagctcttcccaactgggaaacaactggagcctctggttgcc
ccactggctgatgggaaggttgctgttggtcaggacgacctaactgtagtgctaaatgaa
gagggtgtttgcacccagaagtgtgccctgaactggacagacatccctatcgcaatggag
caccagcctccgtacatcatagccgtcctccctcggtacgtggagatccggaccgttgag
ccgaggctgctggttcaaagtgtggagctgcagagacctcgcttcatcacctctgcaggg
ccaaatatcgtgtacgttgccagcaaccactttgtgtggcgcctggtgcccgtgtcgata
gccagccagatccggcagcttctccaggacaagcagtttgagctggctcttcagctggcg
aagatgaaggatgattccgacggtgataaaaaacagcagatacatcacatccagaatctc
tacgccttcaatctgttctgccagaagagatttgatgactccatgcaggtgtttgccaaa
ctcggcacagatcccacccatgtgatcggcctgtacccagacctgctgccgtcagactac
cgcaaacagctgcactatccaaaccctctccccacgctgtccggggcagagctggagaag
gctcatctcgctctaatcgattacctcacccagaaacgcagtcaccttgtgaagcagctg
aatgattctgatccttctacgacgtctccgctcatggagggcacgccgaccattaaaagc
cggaaaaaactcctgcagatcatcgacaccacgctgctgaagtgttacctgcacaccaac
gtggccctggtgtcccccctgctccgtctggaaaacaaccactgccacatcgaggagagc
gagtacgtcctgaagaaggcccacaagtacagcgagctcattattctctatgagaagaag
gggctgcaccagaaagctctgcaggtgctgctggaccagtcgaccaaggccaactctcct
ctgaagggccacgagcggacggtgcagtacctccaaagactgggagtggagaacttggga
ataatctttgagttttctccctgggtgctgaagatctgtcctgaggatggcctgaagatc
ttcaccgaggacctaatagaggtggagactttgcccagagagaaggtgctgaacttcctg
aaggagggcttcaaagagctcgccatcccctatctggagcacatcatttacgtgtgggac
gataagggcccggagtttcacaacgtgctcatccagctctacctggagagggttcagggc
ctcatgaaacagtacctcaactcgctgccagaaggagttccagctgttgctgcagggaaa
gaggaaggtgatctgggcgagttcaggaacaaactgctctcgtttctggatatttccacc
agctatgagccggccagactcatcagtgactttccctttgatggtctgctggaggaacgt
gccctgctcctgggtcggatgggtaaacacgagcaggcgctcttcatctatgtgcacatc
ctgaaggacacccgcatggctgaggaatactgtcaccggcactacagcagttcagtcgaa
ggggataaagacgtttatctgtctttgctgcggatgtacctgtcccctcctgacgtccac
tgcctggggcccatcaagatggagctctccgagcctcaggccaacctccaggcggccctg
cacgtcctggagctgcaccacagcaaactcaacaccaccaaggccatcaatctgctccca
gcgaacacccagatccgagagatccgggtcttcctggagagcgtgctggaggagaaggcg
cagaggaaacgctgcaaccaagtgctcaagagtctgctgcaggccgagttcctcagggtg
caggaggagcgaatcttccaccagcaggtcaaatgtgtcatcacagaggagaaaacctgc
cgagtctgcaagaagaaaataggaaacagtgcgtttgcgaggtatcccaacggcgtggtg
gtgcactacttctgctgcaaagaccgcaacgtgtgtcccactgagcagtaa
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