Semicossyphus pulcher (California sheephead): 138591144
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Entry
138591144 CDS
T10596
Symbol
copb1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spul04131
]
138591144 (copb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spul04147
]
138591144 (copb1)
Membrane trafficking [BR:
spul04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
138591144 (copb1)
Exosome [BR:
spul04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
138591144 (copb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT_2
HEAT
Cnd1
HEAT_EZ
Arm
MMS19_N
Motif
Other DBs
NCBI-GeneID:
138591144
NCBI-ProteinID:
XP_069517767
LinkDB
All DBs
Position
Unknown
AA seq
953 aa
AA seq
DB search
MTAAENVCYTLINVTSDSEPPSEVSLKTDLEKGEIKAKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGKLLQEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKESELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVHTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAVKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKEHPTHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVTEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDTNEAAAADV
LEFVREAIQRFDNLRPLVIEKMLEVFHAIKTVKIYRGALWILGEYCSTKEDIQSVMTEVR
RSIGEIPIVENEIKRETGEMKPEDEVSAAPAQKLVTEMGTYVTQSALSSSRPSKKEEDRP
PLRGFLMDGDFYVAASLATTLTKVALRYVAIVQDKKKQNSFVAESMLIMVTVLHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRKSLSHMLTVRLEEEKLSQKKESEK
RNVTVQADDPISFMQLTAKNEMTSKEDQFQLSLLAAMGNTQRKEAADPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPASCTDAEF
RQMWAEFEWENKVTVNTNITDLNDYLQHILKSTNMKCLTPEKALSGFCGFMAANLYARSI
FGEDALANVSIEKPIHLGPDAPVNGHIRIRAKSQGMALSLGDKINLSQKKTNI
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacggctgcagagaacgtttgttacactttgatcaatgttacatctgactcagagccc
ccttctgaagtcagcctgaaaactgatctagagaagggggagatcaaggcaaagactgaa
gccctgaagaaggtcatcatcatgatcctcaacggggagaagttgccaggactgctgatg
accatcatccgcttcgtgctgcctcttcaagaccacaccatcaaaaagctgctgctggtg
ttctgggagatcgttccaaagacaaccccagatggcaagctgcttcaggagatgatcctg
gtctgtgacgcctacaggaaggacctgcagcatcccaacgagttcatccgcggctccact
ctgcgtttcctgtgcaaactgaaggagtctgagttgcttgagcctctcatgccggcgatc
cgagcctgcctggagcaccgtcacagttatgtgcgccgtaacgctgtcctggccatttac
accatctacaggaactttgaacatctcatcccagatgccccagagttgatccatgatttc
ctcgtcaatgagaaagatgccagctgtaagagaaatgccttcatgatgctgattcatgca
gatcaggaccgagctctggattacctcagcacatgtatcgaccaagttcacacttttggg
gacattctccagctggtcatcgtggagctgatttacaaagtctgccatgcaaacccatct
gagcgtgctcggtttattcgttgcatctacaacctgctgcagtcctccagtccggccgtt
aagtacgaggctgctggtactcttgtaaccctctccagtgcccccacagccgttaaggct
gctgcccagtgctacattgatttgattatcaaagagagcgacaacaatgtgaagctgatt
gttcttgatcgtctgattgaactgaaggagcaccccacccacgagcgtgtactccaggac
ctcgtgatggacatcctgcgtgttctcagcactcctgacctggaagtcagaaagaagacc
ttacagctcgcactggacctcgtttcatcccgcaatgtagaagagttggtgattgtgtta
aagaaagaagtaatcaagacaaacaacgtaacagaacatgaagacactgataaatacagg
cagctgttggtgcgcactctccactcttgcagtgtgcgcttccctgacatggcagccaat
gtcatacctgtgctgatggaattcctaagtgacactaatgaggcagctgctgccgacgtg
ctggagtttgtacgagaggcgattcagagatttgacaatttgagacccctcgtcatcgag
aagatgctggaagtctttcacgccataaaaactgtcaagatctacaggggagcgttgtgg
atcttgggggaatactgcagcaccaaggaagacatccaaagtgtgatgacagaagtacgc
aggtccataggagagatcccgattgtagaaaatgagataaagagggagacaggagagatg
aaaccggaggatgaagtaagtgcagctccagcccagaagctggtgacagagatgggcacc
tatgtgacacagagcgccctcagctcctccaggccttccaagaaggaggaggatagacct
ccactcagaggcttcttaatggatggagacttctatgtggcagcttccctggccaccaca
ctcaccaaagtggccttgcgctatgttgctattgttcaagacaagaagaaacaaaattct
tttgttgcagagtccatgctgatcatggtaactgtgctgcacctgggcaagtcctctctg
cccaagaagccaattacagacgacgatgtggaccgcatctcgctgtgcctcaaggtgctg
tcagaatgctcaccacttatgaatgacattttcaacaaggagtgccgcaaatccctgtca
catatgctgaccgtcagactggaggaagagaagctgtcacagaagaaagagtcggagaaa
cgtaacgtgacagtgcaggcagacgaccccatctccttcatgcagctgacagccaaaaac
gaaatgacttcgaaggaggaccagttccagctcagtctgctggctgctatgggcaacact
cagaggaaggaggctgctgatcccctggcttcgaaactcaacaaggtgacccagctgaca
ggcttctcagatccagtgtatgcagaagcctacgttcatgtcaaccagtatgacattgtg
ctggacgtgctggtggtcaaccaaacaagtgacactcttcagaactgcacccttgagctg
gccactttaggtgatctcaagctggttgagaagccttcgcctctcactctggctcctcac
gattttgctaacatcaaggccaatgtcaaagtggcttctactgagaatggcattatattt
ggcaacattgtctacgatgtgtctggggctgctagcgacagaaactgtgtcgtcctgagt
gacatccacatcgacatcatggactacatccagcctgcttcctgcaccgatgcagaattc
agacagatgtgggcagagtttgagtgggaaaacaaggtgacggtgaacaccaacatcaca
gatctgaacgattacctgcagcatatcctcaagtccaccaacatgaagtgtctgactcct
gagaaggctctgtcgggcttctgcggcttcatggctgccaacctttatgctcgttctatc
tttggagaagacgccctggctaatgtcagcatcgagaagcccatccacctggggccggat
gcacctgtcaacggacacatacgcatcagagccaaaagtcaggggatggcactgagcctc
ggtgacaagatcaacctctcccaaaaaaagacaaacatctga
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