Semicossyphus pulcher (California sheephead): 138591392
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Entry
138591392 CDS
T10596
Symbol
fancm
Name
(RefSeq) Fanconi anemia group M protein
KO
K10896
fanconi anemia group M protein
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
138591392 (fancm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spul03400
]
138591392 (fancm)
DNA repair and recombination proteins [BR:
spul03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
138591392 (fancm)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FANCM-MHF_bd
DEAD
Helicase_C
ResIII
ERCC4
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
138591392
NCBI-ProteinID:
XP_069518081
LinkDB
All DBs
Position
Unknown
AA seq
2058 aa
AA seq
DB search
MSSGSNQRTLFQTWGAPAPQTNVIQPKKDVRKAAGRRKTTPSNSSQLATAHPPRNPLWGQ
IGQESTSISDDPKPAFEDNEDDDDLMLVAVYEAEKSLKLDNANYFHYDNPVETESTVLSP
IPSGGQTYPDFPGFDSSSAKVWIYPTNYPIRDYQLKMSEAALFQNSLVCLPTGLGKTFIA
SVVMYNFYRWYPSGKIVFMAPTKPLVAQQIEACYKVMGIPQAHMAELTGSTAAKQRQEVW
RTKRVFFLTPQVMVNDLSRETCPAQQVKCVVIDEAHKALGNHAYCQVIRQLGSQTLQFRI
LALSATPGGDTKSVQSVISNLLISHIELRSEESPDIQAHSHQRSVEKMIVPLGEALSAQQ
ARYLQVLEKFMSRLVQNRVMAHKDLRTLSKYQLILARDQFRKNPPSHIKGPQQGMLEGDF
ALCISLYHGYELLMQMGLRSLFFYIQGIMDGSREMSRARNELQRTPTFMDLYHEMEAMFV
KPSAGPDEPFIYSHPKLEKLEGVVLQHFTLWAERSADSNGPHEVSTRVMIFSSFRESVQE
IAGMLNRHAPLIRVMTFMGQASAGKGVKGFTQKEQLEVVSRFRQGGFNTLVSTCVGEEGL
DIGEVDLIVCFDAQKNPIRLVQRMGRTGRKRQGRIVVILAEGREEKTYNQSQSNKRSVYR
SIIGNKNSFHMYPNSPRMLPEGVNPTLHKMHITCGRFDHQESSRRSVRGRRSHSEGRASL
IHPQNLIRQGSAASDGFLSSAEYSLWASTMRLEEDEAHPTLKQTHFMSIPGDPAPQEHVS
KSGPPSRELSLWEWRHWQHKTLPTHAVDHSPRCHHFIKVMELIDGMREENEGECRYEQEL
LPYLQKADSVGTVKNKKKKQKSTKTCAKTTISKPKPSHSTVSDLEWIDEEEGTRLVSEFV
VQQDTEPPYDDITDQPGSEAFSPLRSNVDCPEADMDVDCSIVHKDVVKSQHTLDEPVSLD
KLSQLITNTDEDVELQAMFYLPTWASAPPPSCPGRDASLKVILANVADLLSRSPPSLSDD
FQADVAAPSPPPAPQWPQQPFKVSFTLDVDDDEDEEEDVMISDADDALLRADIDDLQEGE
EDSKICRDWPHQEQEQSGMGADSPGWDEVFGEEEEVNDNHDIYGGNKEISDGLNNDLKEE
GADEEAETCKGIKGVMMEEKETNDEMPDLTDGGVRHVADPQMDESMDLFGDDEAFLQMTI
PDISTPGVTPRKSPAAAAAAADTIKTSLHKQTPTNPCSTTRPARTKNIADTPHAKLITDT
RSATEAKQNPESVDGSHDYFSVNFDLGYSLEESEEEEDVPVPSPSPQPKKKALSNSSTPY
NSFHRQIMRPQSGGSKLSTPQMLSEQNKRETSSPLALPLMPKGGELPSPITSPGARRTLM
PSYASPSLLSRAKRRRLEGQNMERAERVEISARQESVCAADSPSPPHPVECNSDSEDEIV
AHKRRHQNKVNPLSSPEVSKICSDVDSPLVVNRKRAAALNTTDETESGAVSDEDFQNESV
FIHRAAAAERQGVQQSKDKRAARRKGRQFLDAEAELSEEGTDVSSDEEDGDEQNRSLEGF
VVNNTHFSEGLNDSEMCGVYLKSVRSPAVQGKFKMSYKNQHNMDIFSQVPEMDETYAEDS
FVVGSEVEEVESSEEGEENIELMPEDSYVEGRRQYATRRRVFIHKARAGAKTAAEPAPEQ
KAKRSRVIRVQDSSEDETEEVGRKKSLTAEGGAAAPSWTKTVLQETSRPQQQLQKPSSSS
STCSSSTMASKVLMLSRAKRCSVTAEEQNERCRQRIENQHVLSDELDFAKPDLLPPSRKQ
PQALPASSSVPQISPALNASVSASPAPPGPVSILADSRCISSGVELMASLRQRHGATVHI
CSLDGSYFIVSNRMAAERHSQSDLASMQNRKRLAERVNSLQGLFERVCLIVEKDKTKPGE
ASRPFQRTRYYDNTLTALVRTGVRLLWSNGPEESAGLLADLAQLEQRKGQGITVPLEVKG
QHRQQSLQLYSSLPSVNHAHALSMSHNFGSIAQLINSSVEAIEKGGCMSRSRAEEVYRFL
RYSCDPVLMHTSKAGKNS
NT seq
6177 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtggctcgaatcagaggactttgttccagacttggggtgcaccggctcctcag
accaacgttattcaaccaaaaaaagatgtcaggaaagccgctggacggcgcaagacaacc
ccaagcaactcttctcagttagctacagcacatcctccaagaaatcctctatggggtcaa
ataggtcaggagtccacgtcgatttctgatgaccccaaacctgcgtttgaagataatgaa
gacgacgatgatttgatgttggtcgctgtttatgaagctgaaaagagcctgaaacttgat
aatgcaaactattttcactatgacaaccccgtagaaacggagagcactgtcctctctccc
atcccgtcaggtgggcagacttatccagactttcctggctttgacagctcctcagctaag
gtatggatctaccccaccaactatcccatcagggattaccagctgaagatgtcagaggct
gccttgtttcaaaactcactggtgtgtctccccactggtttgggaaagaccttcatagcc
tctgtggttatgtacaacttctaccgctggtatccatcagggaagattgtattcatggct
cccaccaaacctcttgttgcacaacagatcgaggcctgttataaagtgatggggatccca
caggcacacatggctgagctgacaggcagcacagcagcaaagcaaagacaggaggtgtgg
aggaccaagcgtgtcttcttcctcacccctcaggtcatggtgaatgatctgtccagagag
acctgcccagctcagcaggtgaagtgtgtggtgatcgatgaagcccacaaggcgctgggc
aaccatgcctactgtcaggtcatcagacagctcggcagccagactctgcaattccgcatt
ttggctcttagtgcaactccagggggggatacaaagtcagtgcagtctgtcatctctaac
ttgctcatctcccacattgagctgcgttcagaagagagtccagacatccaggctcattcg
caccagcgcagtgttgagaagatgattgttcccctgggagaggccctttctgctcagcag
gcgcgttacctgcaggttttggagaaatttatgtctcgtctggtccagaaccgggtgatg
gctcacaaagacctgcggactctcagcaaataccagctcatcctcgccagggatcagttt
cgcaagaacccaccgtcacacatcaagggtccgcagcagggaatgctggagggcgacttt
gccctttgcatcagcctgtaccacggctacgagctgctgatgcagatggggctccgatca
cttttcttttacatccagggaatcatggacggatccagagagatgtccagggccagaaat
gagctgcagaggactcccaccttcatggacctttaccatgagatggaagcaatgtttgtg
aagccatctgctggtccagatgagccgtttatttacagtcaccccaaactggagaagctg
gagggggtggtgttgcagcacttcacactgtgggccgagcgctcagctgacagcaacggt
ccgcatgaagtgagcacgcgtgtgatgatcttttcgtcgttccgcgagagcgtgcaggag
atcgcaggcatgttgaaccgccacgccccgctgatacgggtcatgacttttatgggccaa
gcctcagcagggaagggagtgaaaggcttcacccaaaaggaacaactggaggtggtgagc
aggttccgtcagggaggcttcaacacactggtgtccacctgcgtcggggaggaagggctg
gatatcggagaggtcgacctcatagtttgcttcgatgcacagaagaacccaatccgcctg
gtgcagcgaatgggacgtactggacgtaagcggcagggacggattgttgtcatcctggct
gagggacgcgaggagaagacatacaaccagagccagagcaacaagcgcagcgtgtacagg
tccattatcggcaacaaaaacagcttccacatgtacccaaacagcccccgcatgctgccc
gagggggtcaacccaaccctgcacaagatgcacatcacatgcgggcggtttgaccatcag
gagagcagcaggcgctctgtcaggggtcgacggtcccactctgagggacgggcctcgctc
atccaccctcaaaacctgattcggcagggcagtgcagcgtcagacgggtttctcagcagt
gctgaatattccctctgggcgtccaccatgaggctggaggaagatgaagctcatccaacc
ctgaaacagacgcacttcatgtccatacccggtgatccagcaccacaggaacacgtttcc
aaaagcggaccaccctccagagagctatcgttgtgggaatggagacactggcagcacaaa
acgcttcctacccacgccgtcgatcattccccgcgctgccaccacttcataaaggtgatg
gagctcatcgacggcatgagagaggagaacgagggggagtgtcgctacgagcaggagctt
cttccttacctccaaaaagcagattctgtcggcaccgtgaagaacaaaaagaagaaacag
aagagcactaaaacgtgcgctaagaccaccatcagcaaacccaaaccatctcactcgacg
gtctctgatctggagtggatcgacgaggaagaaggaacacgtttagtttctgaatttgtc
gttcaacaagacaccgagccaccttacgatgacatcacagatcaaccaggaagtgaagcg
ttttctcctctccgctcaaacgtcgactgtccagaagcagacatggacgttgactgttcc
atagttcacaaagacgtcgtaaaatcacagcatacattagacgagcctgttagtttagac
aaactctcacagctgatcacgaatacggatgaagatgttgagctccaggccatgttctac
ctccccacatgggcttcagcacctcctccctcctgtccaggaagagatgcgagtctgaag
gtcatcctggcaaacgtggcggacctcctttccagatctccaccgtccctgagtgacgat
ttccaggccgatgtggctgctccatcgcctcctcctgctcctcagtggcctcagcagcca
ttcaaggtcagctttaccctggatgtggacgatgatgaggacgaagaggaagatgtgatg
attagtgacgctgacgatgccctcctgagggcggacatagatgatcttcaagagggtgaa
gaggacagtaaaatctgtcgtgattggcctcatcaggagcaggagcagagcgggatggga
gcagacagtcccggctgggatgaagtgtttggtgaagaagaagaagtgaatgataatcat
gacatatatggaggaaacaaggagataagtgatggattgaacaatgatttgaaggaggag
ggggctgatgaggaagctgaaacatgcaagggaataaaaggtgtcatgatggaggaaaaa
gagacaaacgatgaaatgccagacctgacagatggcggtgtaaggcatgtcgcagaccct
cagatggatgagagcatggatctgttcggggatgacgaagccttcctgcagatgaccatc
ccggacatctccactcctggcgtcacgcccaggaaatcccccgccgctgctgctgctgct
gcagacacgatcaagacatctttacataagcaaacgccaacaaacccatgtagcaccaca
cgacctgcacgcacaaagaacatagctgatactccgcatgccaagctgataacagacact
cgcagcgctacagaggccaaacagaatcctgagtcagttgacggatcccatgactacttc
tccgtcaactttgacctcggctattccttggaggaatcagaggaagaagaggatgttccc
gtcccatctccatctccgcagcctaaaaagaaagccttgtctaactcctccactccttat
aacagcttccatagacaaataatgcgtccacagtccggtggatccaagttatctacgcct
cagatgctgtcagagcagaacaagagggaaacatcctctcctctggctctgcctttaatg
ccaaaaggtggtgaactcccatctccgatcacttcccccggagcgaggaggacgctcatg
cccagttacgccagcccgtctttactctccagggcgaagcggagacgactggagggtcaa
aacatggagagggcagagagagtcgaaataagcgcacgccaggaatctgtttgtgcggct
gactctccatcacctcctcatccagtggagtgcaacagcgacagcgaggatgaaattgtg
gctcataaaagacgacatcagaacaaggtcaacccgttgtcgtcaccagaagtgtcaaag
atctgcagcgacgtggactccccgcttgttgtgaacaggaaacgtgccgctgcattaaat
acaactgatgaaacggagagcggagccgtttctgatgaggatttccagaatgagtctgtg
ttcatacacagagccgcagccgctgagagacaaggagtccaacagagcaaagacaagcgc
gccgcaagacgaaaagggcgtcagttcctggacgcggaagcagagctgtcggaggagggc
acagacgtgtcgtctgacgaggaggacggagacgaacagaaccgctctcttgaaggcttc
gtggtcaacaacacgcacttctctgagggactgaacgactcagagatgtgcggggtttac
ctgaagtcagtgagaagccctgcagtccagggcaagtttaaaatgtcctacaaaaatcaa
cacaacatggacatattctcccaggtgcctgagatggatgaaacgtacgcagaggacagc
ttcgtggttggaagtgaggtggaggaggtggagagcagcgaggaaggggaggaaaacatc
gagctcatgcccgaggactcgtacgtggaagggcggaggcagtacgccaccagacggcgt
gtgttcattcacaaagctcgagctggggctaaaactgcagctgaacctgcaccggagcag
aaagccaaacgctcccgtgtcattcgcgttcaggattctagtgaggatgagacagaggaa
gttggtagaaagaaaagtctcacagcggagggtggtgctgctgccccctcgtggacaaag
acggtactgcaagagaccagcagacctcagcagcagctgcagaaaccctcctcatcctcc
tccacctgctcttcctcaaccatggcatcaaaggtgttgatgttgagcagggcgaagaga
tgctcggtgactgcagaggagcaaaatgagaggtgtcgccaaaggatagaaaatcagcat
gtgctctctgatgaactagactttgcaaagccagatttgctgccaccctccaggaaacaa
ccccaggctctcccggcctcctcctcagtccctcagatatccccagccctgaatgcctcc
gtcagtgcgtctcctgctccgcctgggcccgtgagcatcctggccgacagtcgttgcatc
agcagcggagtggagctcatggccagcctgcgtcagcgtcacggagccaccgtccacatc
tgctcgctggacggcagctacttcatcgtcagcaaccgcatggccgccgagaggcacagc
caatcagatttggcctcgatgcagaacaggaagcggctggctgagagagtgaacagcctg
cagggactgtttgaaagagtttgtctgatagtggagaaggacaagaccaagccaggtgag
gcgtcacgccccttccaacgaactcgttactatgacaacactctgacagcactggtgcgc
accggggttcgcttgctgtggagcaatggccccgaagagagcgcaggcctgctggcagac
ctggctcagctggagcagcgtaaaggtcagggcatcactgtcccactggaggtcaaaggg
cagcacaggcagcagagcctgcagctgtactccagcctgccctctgtcaaccacgcccac
gccctcagcatgagccacaacttcggctccatcgcccagctcataaacagctccgttgaa
gccatagagaaaggcgggtgtatgagtcgatccagagctgaggaggtctaccgcttcctg
cgctactcctgcgaccccgtcctcatgcacacttcaaaagcaggaaaaaacagctag
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integrated database retrieval system
