Semicossyphus pulcher (California sheephead): 138592085
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Entry
138592085 CDS
T10596
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
138592085 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spul03400
]
138592085 (xrcc5)
DNA repair and recombination proteins [BR:
spul03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
138592085 (xrcc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
VWA
DUF6005
Motif
Other DBs
NCBI-GeneID:
138592085
NCBI-ProteinID:
XP_069518807
LinkDB
All DBs
Position
Unknown
AA seq
724 aa
AA seq
DB search
MAGSKSALVLCMDVGYSMSNSAPGEEPPFELAKKVIQKFVQRQVFAETKDELALVLFGTD
YTNNPLDQDGQYQNISVHRHLMMPDFDLLEEIQNQIHPEGSQADWLDALVVCQDLLQTET
KDKKCDRRIIALLTDLSTQASSDNLDVIIENLKQDNITLQFFLPFPADEDEEGGGDAERR
GPGHPGTGKGLTSEQKDGLDMVKHIMLTLDEEDGLDEVYTFRNAIEQLCMFKRIERRPMA
WPCQLTIGSCLTIRIVGYKAVTEEKLKKTWVTVDAQTNQKEDVKRETVYCLDDDNETEVQ
KDDTIQGFRYGSDIVPFSKVDQDQMKYKHDGKCFAVLGFTKQSQVNRHQFMGTQVIKMFS
AKEDEHAAVALSALIRALHELEMVAIVRYAYDRRSNPQVGAAFPCIKKNYECLMYVQLPF
MEDLRQFTFPSLENNKKLTPSDTQLSAVDSLIDSMMLVEEEDGEKKDLFKVHNIPNPAFQ
RHFQCLHHRAVSPGTPLPSMEPWLKAALERPDVVSERCQAPLEEIKRKFPLTEVEKKKKL
KTSAQIFGKDSAEPDAKKAKGEEEEEEYNLKDIAEGSVTKVGSVDPARDFRTLIKQKTLP
IGEACQQLTHRIEQLLSNKNTHYYMKSITCIQAFREQSVKLGNADLYNSYLQSLKRSIPN
RGLEVFWDLLVQDALTLISKDEVEGSTVSKNEANQFLAAEEKKEEAAAPPAEDAGDFDDL
LDMM
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggcaggttctaaatcagccctagtgttgtgcatggatgttggatactccatgtccaac
tctgcccccggtgaagagccaccctttgaacttgccaaaaaagtcatccagaagtttgtc
caacgccaggtgttcgcagagacaaaggatgagcttgctttagttctgtttggcacagac
tacacaaataacccactggaccaggatggtcagtaccagaacatcagtgtgcatcgccat
ctaatgatgcctgattttgaccttctggaggaaatacagaatcagatccatccggagggt
tcgcaggctgattggctggatgctcttgtggtctgccaggatctccttcagacagaaaca
aaggacaagaagtgtgatcgtcgcatcattgccctcctgaccgacctcagcactcaggcc
agttctgataacctggacgtcatcattgagaacctgaaacaagataacatcaccctgcag
tttttcttgcctttccctgcagacgaagatgaagaaggtggaggagatgcagaaagaaga
ggccctggtcatccaggcacggggaaaggcctgaccagcgaacagaaggatggtctggac
atggtgaaacacatcatgctgactctggatgaggaggacggcctggatgaagtttacacc
ttcaggaatgcaattgaacagctgtgtatgttcaagcgtatcgagaggagacccatggcc
tggccctgtcagctgaccatcggcagctgtctgaccatccgcattgttggatacaaagca
gtgactgaagagaaactgaagaaaacgtgggttacagtcgacgctcaaacaaaccagaaa
gaagacgtgaaacgagagaccgtctactgtctggatgatgacaatgagactgaggtgcag
aaggatgataccatccaaggttttcgctatggaagtgatatcgtccccttctccaaagtt
gatcaggaccagatgaagtacaagcatgatgggaagtgcttcgctgttcttggctttacc
aaacagagccaggtaaatcgccatcagttcatggggactcaagtcatcaagatgttttct
gctaaggaagatgagcacgcagcggttgctctgtccgctctaatccgagcgctacatgaa
ctggaaatggtggccattgtacgttacgcctacgaccggcgcagcaaccctcaagtagga
gcagccttcccctgcattaagaagaactatgagtgcctgatgtacgtccagctgcccttc
atggaggacctcagacagtttacatttccttctcttgaaaacaacaaaaagttaactcca
tcagacacccagctgtcggcagtggactccctcatcgactccatgatgttggtagaggag
gaagatggagaaaaaaaggacttgttcaaggtccacaacattcccaaccctgccttccag
aggcacttccagtgtctgcatcatcgtgcagtgagtcccggcacccctcttccctccatg
gagccgtggctgaaggctgctcttgagcgccctgatgtggtcagtgaacggtgccaggct
ccgctggaggagataaagaggaagtttcctctcacagaagtggagaagaagaagaagctg
aagacgagtgctcagatttttgggaaagactctgcagagccagatgccaagaaggccaaa
ggagaagaagaagaggaggagtataacctcaaggacattgctgaaggctcggttactaag
gtggggagcgtggatccagcccgggacttccgcactttgatcaagcagaagactcttccc
atcggagaggcctgtcagcaactgactcacaggatagagcagttgcttagcaacaagaac
acgcactactacatgaaaagcatcacctgtatccaggctttcagggagcagtcggttaag
ctggggaatgccgatctgtacaacagctacctccaatccctgaaaagaagcatcccaaac
agagggctggaagtcttctgggacctgcttgttcaagatgccttaactctgatcagcaag
gacgaggttgagggaagcactgtatccaaaaacgaagctaaccagtttctggctgctgag
gagaagaaagaggaggcggctgcaccacctgcagaagatgcaggagactttgatgacttg
ctggacatgatgtaa
DBGET
integrated database retrieval system
