KEGG   Semicossyphus pulcher (California sheephead): 138592157
Entry
138592157         CDS       T10596                                 
Symbol
col4a2
Name
(RefSeq) collagen alpha-2(IV) chain
  KO
K06237  collagen type IV alpha
Organism
spul  Semicossyphus pulcher (California sheephead)
Pathway
spul04382  Cornified envelope formation
spul04510  Focal adhesion
spul04512  ECM-receptor interaction
spul04518  Integrin signaling
spul04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:spul00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    138592157 (col4a2)
   04518 Integrin signaling
    138592157 (col4a2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    138592157 (col4a2)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    138592157 (col4a2)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    138592157 (col4a2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:spul04147]
    138592157 (col4a2)
   00536 Glycosaminoglycan binding proteins [BR:spul00536]
    138592157 (col4a2)
Exosome [BR:spul04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   138592157 (col4a2)
Glycosaminoglycan binding proteins [BR:spul00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   138592157 (col4a2)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 138592157
NCBI-ProteinID: XP_069518930
LinkDB
Position
Unknown
AA seq 1673 aa
MSRTMQGLHNRGLYNLRLLLLCLSIAILASGVHAGGKKHSGPCGGRDCSGGCKCFPEKGA
RGPPGALGPQGSQGPSGRPGDSGIQGHKGQKGDSGHGGIFGPKGNVGMTGVPGFTGSDGI
PGHPGQAGPRGKPGADGCNGTNGEPGSPGQPGYSGSPGFPGQHGRKGAKGDSLELSVYME
RFRGDPGTPGFNGIVGPRGNPGWPGNSGYPGPKGPPGPPGPRGPKGTMTKVLKGLRGDQG
DIGPPGPQGNSTHPLVKVTYENQGDKGLKGEVGDQADNKGETGVMGFPGQRGYPGGNGSD
GARGDFGDPGQKGRDGPKGDRGEAGELISSGLWPWPAGGGPAGPPGEQGPQGERGPVGDQ
GYPGPPGLPASGSQHLVLAFYGPFGKKGEQGEKGQQGEPGLPAVTAGPPGSNGRPGETGP
PGPKGSWAEFFKGAPGGSGRPGYSGYKGLKGDHGECECSGVDTTPGPRGPAGERGDPGMT
GEFGPQGDVGDPGPQGDDGFPGFAGLSGVPGPKGRKGDLTHVTEKGFSGDPGSQGLDGEP
GSPGAPGRDGLPGFPGTRGLYGAGPTGERGDKGFPGRAGQPGVAGFRGEPGAALIGIKGQ
RGLPGDDGLAGYLGVPGTPGAPGGCIPRGDGGHVDVTGPCSAVQGPPGLPGPPGFAGSPG
FPGGPGQKGPQGQHGPYGEKGESGERGIGGSPGPPGFPGPRGELGIPGSKGSVGSFGFPG
VPGRHGPQGDKGLHGDILGASTGPPGDPGPPGLQGQKGQAGDPGEPGYGGMSGMPGMIGF
KGHGGPHGLQGEQGRPGPAGKYGYPGDRGNAGSPGPRGGVGQPGVIGERGPEGDPGPPGP
IGLKGVPGTYGDDGIIGEYGPLGNPGQPGGDGRPGLSGMKGYKGSTGMSGFQGIRGGAGG
KGFSGQRGEPGLFGQVGLKGLSGQGGEKGDRGLRGRPGDKPKITAQVKVDMKGAKGDHGG
HGNQGFTGPRGTKGIYGVPGTEGSHGLPGEPSSEKGYYGDPGAQGLPGIKGMPGLTGNRG
IDGFQGMPGNTGIKGSPGAYGASGDKGRKGIKGEKGLRIDLQGTPGLRGEFGIPGDPGRI
GFTGATGHRGEPGSDGIEGKRGESGEPGIFGSQGSDGQRGTPGNQGEKGFPGPSGKEGHP
GFPGFPGNRGFPGLKGLYGLDGLKGQKGVAGTPGLDTLGPAGESGVKGEKGESGDPNSQP
GFPGTEGLKGFQGPQGDHGQPGLPGFRGPVGPEATSDRPGSSGDHGFLGPKGYQGFPGAR
GFPGVDAPPGEKGIDGINGFPGLPGQKGYKGNQGLPGYIGPNGVPGKKGVKGGQGLMGVP
GQMGLKGERGAPGPKGNTGPPGFRGNPGNQGRPPIPIRIPGERGIPGPQGIQGPKGFNGG
PGPHGPPGDNGFMGPIGLKGMPGIGGRPGTPGFRGANGQLGHPGLQGEEGRRGSTGVPGL
PGMPGRSVSVGYLLVKHSQSEQTPMCPVGMSKLWDGYSLLYLEGQEKAHNQDLGLAGSCL
PRFNTMPFLYCNPGDICYYASRNDKSYWLSTTAPLPMMPVEEAEIKPYISRCSVCEAPSV
AIAVHSQDITIPQCPSGWRSLWIGYSFLMHTAAGNEGGGQSLSSPGSCLEDFRTSPFVEC
NGAKGTCHYFANKYSFWLTSIDQSFHTQPASETLKAGQLLSRISRCQVCMKNL
NT seq 5022 nt   +upstreamnt  +downstreamnt
atgagtcggaccatgcaaggactacacaacagaggactttacaatctgaggctgctgctt
ctctgcctctccattgctatcctcgcctctggagtgcacgcgggcgggaagaagcacagc
ggcccctgtggaggaagagactgcagcggaggatgtaaatgtttcccagagaagggagcc
aggggtcccccaggggctctcggtcctcagggctcccaggggccttcaggacgaccaggt
gactcaggcatccaaggacataaggggcagaaaggtgactctggacatggcggcatcttc
ggtcctaaaggaaatgtgggaatgaccggcgttcccgggtttactggaagcgatggcatt
cctggacaccctggacaagccggccccagagggaaaccgggcgcggacggatgtaacggg
acaaacggagaaccaggctcaccggggcaacctggctatagtggctcacctggttttcct
ggacaacacggccgaaagggagcgaagggagactctctggagctgagtgtgtacatggag
cgtttcaggggggatccaggcacgccagggttcaacggaatagttgggcctcgtggaaac
ccgggatggccgggaaacagtggctacccaggaccaaagggtcctccagggcctcctggt
ccccgtggaccaaagggcacaatgaccaaagtgctgaaaggactccgaggagaccaaggg
gacatcggaccaccagggccgcagggaaactccactcatccgcttgttaaggtcacctac
gaaaaccaaggagataaaggtctgaagggggaagtaggagatcaggctgacaacaaagga
gagactggtgtgatgggcttcccaggacagaggggttatcctggtgggaatgggagcgat
ggagcgaggggggacttcggtgatccaggacagaaaggcagagatgggcctaagggtgac
agaggagaagcaggagagctgatttcatcaggactctggccctggcctgcaggaggtggt
cccgccggtcctcctggtgagcagggtccacaaggagagaggggcccggtcggagaccaa
ggctatcccggacccccaggtttgcccgcctccggatcacagcacctagtgttggctttc
tacgggccgtttggtaaaaagggggagcagggagagaagggccaacaaggggaaccagga
cttcctgctgtcactgcaggacccccgggcagcaatggccgaccaggggagacgggccct
ccaggacctaaagggtcatgggccgagttcttcaagggagcccccggcgggtcaggacga
cccggatattcaggctataaaggactgaaaggtgatcatggggaatgtgaatgcagcggt
gtggacaccacaccgggcccccgtggccctgcaggagagcgaggggatcctgggatgact
ggagagtttggtccgcagggagatgtaggagaccctggtcctcagggagacgacggattc
ccaggatttgctggactcagcggagttccaggtccaaaaggtcgcaaaggggacctgact
catgtcacagagaaaggattttctggagacccagggtcacaggggctggacggcgagcca
ggatcgccgggtgctccaggccgagatgggttgcctggtttccctgggaccagaggtctt
tacggagcgggtcccaccggagaacgtggagacaaaggtttcccaggtcgggccggccaa
cccggtgtagccggtttcaggggggaaccaggtgcagccctcattggcatcaaaggccag
cgtgggttacctggtgacgacggtcttgctggatatctaggtgttccaggaacacctgga
gccccaggcggctgtattccaagaggagatggaggacatgtggatgtaacaggtccttgc
agcgctgttcaaggaccccccggactgcccggtcctccaggattcgctggatcaccaggt
ttcccaggtggtccgggccaaaaaggacctcagggtcaacatggaccgtatggagagaaa
ggagaatcaggagaacgaggcataggtggctctcctggaccaccaggtttccccggcccc
cgtggagagttgggaattcctggcagcaaaggttcggtaggatcttttggtttccccggt
gtacccggccgacacgggccacaaggagataaaggtcttcatggggatatcctcggagca
tcgacaggaccacctggtgaccccgggccgcctgggcttcaaggacaaaaaggccaggct
ggtgatccaggagagcccggctatgggggaatgagcggcatgcctggcatgatcggcttc
aagggtcacggtggtcctcacggcctgcagggggagcaagggaggcccgggccagccggc
aagtacggctaccctggtgatcgtgggaacgcaggttctcctgggccgcgtggtggtgtt
ggacagccaggtgtcataggagagaggggacctgaaggagacccaggccctccgggtcca
atagggttgaaaggcgtcccaggtacatacggtgatgatggcattatcggagagtatggg
ccattaggtaacccagggcaacctggtggagacggacgcccaggactttcaggaatgaag
ggttacaaagggtcgacaggcatgtcaggttttcagggcatccggggtggtgcaggaggg
aagggcttcagtggccagagaggagaacctggattgtttggtcaagttggccttaaagga
ttgtcgggtcaaggtggagagaaaggtgatcgtggtttgagaggacgacccggggacaag
cctaagattactgctcaggttaaggttgacatgaaaggagccaagggagaccatggaggc
cacggaaatcaaggtttcactgggccaagaggtactaagggtatctacggtgtgccgggc
actgagggaagtcacggtcttcctggagaacccagcagcgagaaaggttactatggagat
ccaggtgcacaggggctgccggggataaaaggaatgccaggccttacaggaaatcgagga
atcgatggtttccagggaatgccaggcaacacgggaatcaaagggagtcctggtgcctac
ggtgcatcaggagacaaaggaaggaaaggaatcaaaggtgagaaaggccttcgtatagac
cttcaaggaactcccggattgagaggagagtttggtattccaggagatccaggccggata
ggttttactggagctactgggcacaggggtgaacctggctctgatggtattgaagggaaa
agaggagagtcgggtgaacccggaatatttggatcccaaggctcagatgggcagagggga
actcctggtaaccaaggtgaaaaaggctttcccggaccttctggaaaagaaggacacccc
ggctttcctggcttcccaggaaacagaggtttccccggcttgaagggtctgtatggatta
gatggactgaaaggacaaaagggtgtcgctggaaccccaggtctggatacacttggacca
gctggggaatcaggagtcaaaggagagaagggagagagtggagaccccaacagccaacca
ggttttcccggcacagagggtttgaaaggcttccaggggccccaaggtgatcatggtcaa
cctggactgccaggattccgcggccctgttggaccagaggcgacttcagacagaccagga
tccagcggggaccacggctttttaggacctaaagggtaccaaggattccccggagccaga
ggattccctggtgtggatgctcctcctggagagaagggtatagatggaattaatggtttt
cctggacttcctggtcagaaaggatacaaaggaaatcaaggtcttcctggatacataggg
ccaaatggggtccctggaaagaaaggagtgaaaggaggtcaggggttgatgggagttcct
ggtcagatgggtttgaagggagaaagaggagcacctggtccaaaaggaaacactggaccc
ccaggttttcgtgggaatccaggcaaccagggtcgtccaccaatccccatcaggatccca
ggagagaggggcattccaggaccgcagggcatccaaggaccgaaggggttcaacggtgga
cctgggccacacggccccccaggggataacggtttcatgggacccatcggtctgaaaggc
atgcctgggatcggaggtagaccaggaacgcctggattccgaggagcgaatggacaactg
ggccaccccggtctgcagggcgaggaaggtcgccgtggcagcactggtgtcccggggtta
cctggaatgcctggccgcagcgtcagcgtggggtatttgctggtgaagcacagtcagtcg
gagcagacgcccatgtgtcctgtgggcatgtccaaactgtgggacggctacagtctgctg
tacctcgagggacaggagaaggcccacaaccaggacctgggtctggcgggctcttgcctc
cctcgcttcaacaccatgcccttcctgtactgcaaccctggagacatttgttactacgcc
agcaggaacgataagtcctactggttgtcgacgacggcccctcttcccatgatgcccgta
gaagaggcagagatcaaaccgtacatcagccgctgctcagtgtgtgaagctccatcggtg
gccatcgcggtccacagtcaggacatcaccatcccgcagtgtccgtcgggctggcgcagc
ctgtggatcggatactccttcctcatgcacacggcggcaggaaacgaaggcgggggccag
tccttgtcgtctccgggctcctgcctggaggacttccgcacatcgccgttcgtcgagtgt
aacggggccaaaggcacgtgccactactttgccaacaagtacagcttctggctaacctcc
atcgatcagtcgttccacactcagccagcatcagagacgctcaaagcgggccagctcctg
tcgcgcatcagccgctgccaggtgtgcatgaagaacttgtaa

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