Semicossyphus pulcher (California sheephead): 138592256
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Entry
138592256 CDS
T10596
Symbol
ifih1
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul04622
RIG-I-like receptor signaling pathway
spul05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
138592256 (ifih1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
138592256 (ifih1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
spul04054
]
138592256 (ifih1)
Enzymes [BR:
spul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
138592256 (ifih1)
Pattern recognition receptors [BR:
spul04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
138592256 (ifih1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARD_2
RIG-I_C-RD
RIG-I_C
DEAD
Helicase_C
ResIII
SWI2_SNF2
DUF3638
DUF576
ERCC3_RAD25_C
ARM_LIN_C
Enterotoxin_ST
Motif
Other DBs
NCBI-GeneID:
138592256
NCBI-ProteinID:
XP_069519087
LinkDB
All DBs
Position
Unknown
AA seq
982 aa
AA seq
DB search
MASDQDDANVRLVDDLTPRLRELIEVERVLDHVNLIENDVRDRIRQKAKYETNLAAVDLL
LWAVTKKPHSPGWFRAFVDALVNAGLENAAEYIEVNHRKPEEDAENDYCVKLIQILSPSL
IEMKTDDVCHMCFARELLSQDDKELIEATIKNKGLRSGARELLRAIVRGRQWYSTFLSVL
RDTGHQNLYELTGGSPDCDKLGSDEKRSSCKDEHTGSDVTMEERPAVAERSDSPEFMEIS
VTEKPQNQDLYEGMMVESRPQPNSLERLQPDGTDSAAGPERAHIVLRDYQMEVARPALEG
KNIIICLPTGSGKTRVAVYITKIHLDSRRAEGRSGKVVVLVNKVPLVEQHYSAEFLRFLK
HTYKVERVSGDCQHKISFTEIVRRNDVIICTAQILENYLERSNKGEDEGVNLSDLSLIVI
DECHHTQKGEVYNHIMMRYLKQKHKNIRLKKEQKETSPLPQILGLTASPGVGEATRMEQA
EEHILRICANLDASNIMTRGLGEYKKEQRTKVVTVEDRNQDPFGDVIKNIMNAIHTHANL
SPTCDLGSQIYEQWVVQKERIAATEEDHKVRVCADHLRQYNEGLNLSNTIRMCDSFSFLK
KYHEEELKRKTPAEEEQIIQITDTERFLFNLFNEKKEELQKLTEIPAYENDSLSKLRVNI
LQEFSTRDAPRGIIFTKTRRSAIALTNWIQENPKFADIGVKASYIIGGGDQSVVKPMTAA
EQKDVLKKFGKGEVNLLIATSVAEEGLDIPECNIVIQYGLLTNEIGMIQTKGRGRAEGSS
YILIDTKNSGVAEKECVNEYRINMMNKAIGKIRALNPEDYRKKVEEFQFHSIMEDRVRAT
KRRQKDIKNENPSDVKFSCRGCSRPACTGEDIQVIGNVHKVNVTSQFSDLFIQTENTRLQ
ERLLDYETNGFISCKHCGQRWGSMMLFHGLECPSLHVKNFVVTVNGKKVNKCVKWKDLAV
KFSDFDYVEHARQVMPSSDDED
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgaccaggatgatgcaaacgttcgtctcgttgatgaccttacaccgaggttg
cgagagctgattgaggtggagcgtgtcctggatcatgtgaatttgatcgaaaacgacgta
agggatcggatcagacagaaagcgaagtacgagactaatttagcggctgtagatcttctc
ctatgggccgtcaccaaaaagcctcacagccctggatggttcagggcgtttgttgacgcg
ctggtaaatgcaggtttagaaaacgcagcggaatacatagaggtgaatcaccgaaaacct
gaagaagacgcagagaatgattactgtgtcaagcttatacagatactgtccccaagtctt
attgagatgaagactgatgatgtgtgccatatgtgtttcgcaagagaactgctgagccaa
gacgacaaggagcttatagaagctacaataaagaataaagggctcaggagtggagcccga
gagcttctgagagcaatcgtgagaggtcgacagtggtattctacatttctcagtgttctg
cgtgacactggacaccagaacctgtatgagctgactggaggatcacctgactgcgacaag
ctaggctcagatgagaaacggtcttcatgtaaagatgaacacacaggaagtgacgtaaca
atggaggagagaccagcagtagctgaaagaagtgatagcccagagttcatggaaatcagc
gtaacagagaagcctcagaatcaagacctgtacgaaggaatgatggttgaatccagacca
cagccaaacagcttggagcgcttgcagccagatgggactgactcagctgcaggcccagaa
agagcgcatattgttcttcgagactatcagatggaagtcgctagacctgccttggagggg
aaaaacatcatcatatgcctcccgacgggaagtggtaaaaccagagttgcagtttacatt
accaaaatacatctggacagcaggagggcggaagggcgatcagggaaagtggtcgtcctg
gtgaacaaggttccccttgtggagcagcattattctgcagagttcctgcgttttttgaag
cacacgtataaagtggagagagtcagcggagactgccagcacaaaatctccttcacagag
attgtgaggaggaatgacgtcatcatctgcacagcccagattcttgaaaattacttggag
aggtctaacaaaggggaggacgaaggggtgaacttgagcgatctgtcactgatcgtgata
gatgagtgtcaccacactcaaaaaggagaggtctacaaccacataatgatgcgttacctg
aagcagaaacacaagaacataaggctgaagaaggagcagaaggagacctcgcccctgcct
cagatcctgggcctgactgcctcgccgggggtcggggaagccacaagaatggagcaagca
gaggagcacatactacgcatttgtgcaaacttggatgcttccaatatcatgacaagggga
cttggggaatacaaaaaggaacaaaggacaaaagttgtaactgttgaagacagaaaccag
gacccctttggtgatgtcatcaagaatatcatgaatgccattcatacccatgccaatctg
agtcccacctgtgaccttggctctcagatttatgaacagtgggttgttcaaaaagagcga
atagcggcaacagaggaagatcacaaagtgcgggtttgtgcggatcaccttcgacagtac
aacgagggcctgaatctcagcaacaccatccgcatgtgtgattccttcagtttcctgaag
aagtaccacgaggaggagttaaagaggaagacaccagcagaggaggagcagatcatacaa
atcacagatactgagagattcctcttcaatttgtttaacgagaaaaaggaagagttgcag
aagctcacagagatccccgcttatgaaaatgacagcctgtcaaaactaagagttaatatt
ctgcaagagttcagcacccgggatgcgcctcgtgggatcattttcaccaaaacacgtcgc
agcgccattgctctaactaactggattcaggaaaacccgaagtttgctgacattggagtg
aaagcctcgtacatcattggaggaggagaccagagtgttgttaaaccaatgaccgctgca
gagcagaaggacgtgttgaaaaaatttggcaaaggtgaagtcaacttgctgattgctaca
tcagtggctgaggaaggtttggacataccagagtgcaacattgtgatacaatatggtcta
ctgaccaatgagattggaatgattcagactaaaggcagaggaagagctgagggcagcagc
tacattctgatcgacaccaagaactctggggtggcagaaaaggagtgcgtcaatgagtac
cgcattaacatgatgaacaaagccattggcaaaatcagagccttgaatccagaagactat
cgcaaaaaggtcgaagagtttcagtttcattctataatggaggacagggtgagagcaaca
aaaaggaggcagaaagacataaagaacgagaacccgtctgacgtgaagttcagctgccgc
ggctgcagcaggcctgcctgcaccggggaagacattcaggtcatcggaaacgtgcacaaa
gtcaacgtaacatcacagtttagtgaccttttcattcagaccgaaaacaccagacttcaa
gagagacttctagattatgagaccaatggcttcatatcatgcaaacactgcggacagaga
tggggctccatgatgctcttccacgggctcgagtgcccatctctacacgtgaaaaacttt
gtggtgacagtcaacggaaagaaggtcaacaaatgcgtcaagtggaaggacctcgccgtg
aagttttctgatttcgactacgttgaacacgcaagacaagtgatgccgagctcagacgat
gaagattaa
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