Semicossyphus pulcher (California sheephead): 138592340
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Entry
138592340 CDS
T10596
Symbol
nalcn
Name
(RefSeq) sodium leak channel NALCN isoform X1
KO
K21863
sodium leak channel non-selective protein
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
spul04040
]
138592340 (nalcn)
Ion channels [BR:
spul04040
]
Voltage-gated cation channels
Sodium leak channel, non-selective
138592340 (nalcn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
PsaF
DUF5914
TraP
FAM165
Motif
Other DBs
NCBI-GeneID:
138592340
NCBI-ProteinID:
XP_069519214
LinkDB
All DBs
Position
Unknown
AA seq
1744 aa
AA seq
DB search
MCSAGAISALLFPLIHSLYSTASPSMLKRKQSSRVEAQPMTDFGPDETLADSADIFWINK
PWVHSLLRACAIISVISVCMNTPKTFEHYPPLQYVTFTLDTLLMFLYTAEMIAKMHIRGI
IKGDNSYVKDRWCMFDGFMVFFIWVSLVLQVFEIAGLVDQMSPWGMLRIPRALIMIRAFR
IYFRFELPRSRITNILKRSGEQIWSVSIFLLFFLLLYGILGVQMFGTFNHHCVTNDTQKG
NVSWNSLAIPDTHCSPDGEGYQCPLGFKCMDLEELGLSRQELGYSGFNELGTSIFTVYEA
ASQEGWVFLMYRAIDSFPRWRSYFYFITLIFFLAWLVKNVFIAVIIETFAEIRVQFQQMW
GSRSSTTSTATTQMFHEDAAGGWQLVAVDVNKPHGRAPACLQQLMRSSVFHMFILSMVAV
DVIVAASNYYKGENHRRHYDEFYLAEVAFTVLFDLEALLKIWCLGFTGYISSSLHKFESL
LVVGTTLHIYPDLYHSQFTYFQVLRVVRLIKISPALEDFVYKIFGPGKKLGSLVVFTASL
LIVMSAISLQMFCFVEELDRFTTFPRAFMSMFQILTQEGWVDVMDQTLVAVGHMWAPVVA
IYFILYHLFATLILLSLFVAVILDNLELDEDLKKLKQLKQSEANADTKEKLPLRLRIFEK
FPNRPQMVKISKLPSDFTVPRIRESFMKQFIDRQQQDTSCLFRRLPSASSSSCDHSKRSA
IEDNKYIDQKLRRSIFSIRARNLLEKETTINKILRACTRQRMLSGSFEGQPAKERSILSV
QHHIRQERRSLRHGSTSQRISRGKSLETLTQDHSSTVRYRNAQREDSEIKMIQEKKEQAE
MKRKVQEEELRENHPYFDKPLFIVGREHRFRNFCRMIVRARFNASKTDPITGAVKNTKYH
QLYDLLGLVTYLDWVMIVVTICSCISMMFESPFTRVMHVPSLQFGEYVFVIFMSIELNLK
IMADGLFFTPTAVIRDFGGVMDIFIYLVSLIFLCWLPPDVPPESGAQLLMMLRCLRPLRI
FKLVPQMRKVVREVLKGFKEIFLVSILLLTLMLVFASFGVQLFAGKLAKCNDPHILKRDE
CHGIFRINVSVSKNLNLKLKPGEKKPGFWVPRVWANPRNFNFDNVGNAMLALFEVLSLKG
WVEVRDVIIHRVGPIHGIYIHVFVFLGCMIGLTLFVGVVIANFNENKGTALLTVDQRRWE
DLKSRLKIAQPLHLPPRPETGGFRAKMYDITQHPFFKRGIAVLVLAQSVLLSVKWDVDDQ
VTFPLATMSVVFTFIFVLEVTMKLIAMSPAGYWQSRRNRYDLLVTSLGVIWIVLHFSLLN
AYTYMMGTCVIVFRFFTICGKHVTLKMLLLTVVVSMYKSFFIIVGMFLLLLCYAFAGVVL
FGTVKYGENINRHANFSTAGKAITVLFRIVTGEDWNKIMHDCMLQAPFCTPDNHRYWETD
CGNYAGALIYFCSFYVIIAYIMLNLLVAIIVENFSLFYSTEEDQLLSYNDLRHFQIIWNM
VDDKREGVIPTSRVKFLLRLLRGRLEVDLDKDKLLFKHMCYEMERLHSGGDVTFHDVLSM
LSYRSVDIRKSLQLEELLAREQLEYTIEEEVAKQTIRMWLKKCLKGIRAQLQSCCIFQSL
RESQQQELSRLLNPPSIETTVPSEDHNANNPDNPSQPEMSGLQQLLSPTLSDRGGYRQDS
SDLGRPQRKLGQWRLPAGRTSVKSIVCKMNPVNDEASSGSEVKKWWTRQLTVESDESGDD
LIDI
NT seq
5235 nt
NT seq
+upstream
nt +downstream
nt
atgtgcagtgctggagcaatttcagctttacttttccctttgatccactctctgtatagc
acagcaagccccagcatgctgaagaggaaacagagctcacgggtcgaggcccagcccatg
accgactttgggccggacgagaccctcgcagacagcgccgacatcttctggatcaacaaa
ccatgggtgcactccctgctaagggcctgtgccatcatcagtgtcatctctgtttgtatg
aacacccccaagacattcgagcattaccctccgttgcagtatgtgacgttcacgctagac
accctgctgatgttcctctacaccgccgagatgatcgccaagatgcacatcagaggaatc
atcaagggggataactcctatgtcaaggatcgctggtgtatgtttgatggattcatggtg
tttttcatctgggtgtccctggtgctgcaggtgtttgaaatagcggggcttgtggatcag
atgtctccatggggaatgttaagaatccctcgagcgctcattatgatccgggccttcagg
atctacttccgcttcgagcttcctcgctcacgcatcaccaacattctgaagcgatcgggg
gaacaaatctggagtgtctccatcttcctgctgttttttctgctgctctatggaattctg
ggtgttcagatgtttggaacgttcaaccatcactgtgttactaatgatacacagaaaggt
aatgtgtcgtggaacagcttggccatcccagacacacattgttctccagatggggagggc
taccagtgtcctctgggcttcaaatgcatggacctggaagagctgggcctcagccgacag
gagcttggttatagtggcttcaatgaactcgggacgagtatcttcaccgtgtacgaggct
gcgtcacaggagggttgggtgttcctcatgtacagagccattgacagtttccctcgctgg
cgctcctacttctactttataaccctcattttcttcttggcatggcttgtcaagaatgtg
ttcatagcagtcatcatcgagacgttcgctgagatcagagtgcagtttcagcagatgtgg
gggtcgaggagcagtaccacctccactgctacaacacagatgttccatgaagacgctgct
gggggatggcagcttgtagctgtggacgtcaacaaaccacatggccgagcgcctgcctgc
ctccagcaactgatgcggtcgtctgtgttccacatgttcatcctgagcatggtcgctgtg
gacgtcatcgttgctgctagcaactattataaaggcgagaaccaccgcaggcactatgac
gagttttacctggcagaggtggcctttactgtcttgttcgacctggaagctcttctgaaa
atctggtgtctgggcttcaccggctacattagctcctccctgcacaagtttgaatctctg
ttggtggtgggcaccacgctgcacatctaccccgacctctaccactctcagttcacctac
tttcaggtgctccgtgtggtgcgtctcattaagatttccccggctctggaggactttgta
tacaagatatttggtcccggtaagaaactgggcagcctggtggtgttcacagccagcctc
ctcatcgtcatgtcggccatcagcctgcagatgttctgcttcgttgaggagctggaccgc
ttcaccacattccccagggcattcatgtccatgttccagatcctaacccaggagggctgg
gtggatgtcatggaccagactctggtggctgtaggtcacatgtgggctcccgtggtggcc
atttacttcatcctctaccatctgtttgctaccctgattctgctcagtcttttcgtggct
gtgatcctggacaatctggagttggatgaagacttgaagaagctcaaacagctcaagcaa
agtgaagccaacgctgacaccaaagagaagctcccactgcgactcaggatctttgaaaag
tttcccaacagacctcagatggtgaagatctccaagctcccatctgatttcacagtgccc
aggatcagggagagtttcatgaagcagttcattgatcggcagcagcaggacaccagttgt
ttgttccggcgtcttccctccgcttcatcgtcctcctgtgaccactccaaacgctcagcc
atcgaagacaacaagtatatcgaccaaaagcttcgcaggtcaatatttagtatccgagct
cgcaacctcctggaaaaagaaactactatcaataaaattctgcgagcgtgtaccagacag
cgtatgctaagcggatcttttgaaggccagccagccaaagaacgctccatactcagcgtc
cagcatcacatacggcaggagcgcaggtctctgagacatggctccaccagtcagcggatc
agccgagggaagtcgctggagacgctcacccaggatcattcaagtactgttcgctaccgt
aacgcacagagagaggacagcgagatcaagatgatccaagaaaagaaagaacaagcggag
atgaaaagaaaagtccaggaggaggaactgagagagaaccatccttactttgataagcct
ctcttcatcgtgggccgggagcaccgcttcaggaacttctgcaggatgatcgttcgagca
cgcttcaatgcatccaaaactgaccccataaccggagcggtgaagaacaccaaataccac
cagctgtacgatcttctgggtctcgtcacctatttggactgggttatgatcgtcgtaacc
atctgctcctgcatctccatgatgttcgaatcacccttcaccagggtcatgcacgtcccc
tcgctgcagttcggggagtatgtgtttgtgatcttcatgagcatcgagctgaacctgaag
atcatggccgacggtctgttcttcactcccacagctgtaatcagagactttggaggagtc
atggacatcttcatctatcttgtgagtctaatctttctgtgctggctgcctcctgacgtc
cctcctgagtctggggctcagctgctgatgatgctgcgctgcctgcgtccgctcaggatc
ttcaagctggtaccccagatgaggaaggtggtgcgggaggttctcaaaggattcaaggag
attttcttggtttccattctgctcctcacgctaatgctggtgttcgcgagctttggagtt
caactgtttgccggaaagcttgccaagtgcaacgacccccatatccttaaacgggacgag
tgtcacggtattttccgaataaatgtcagcgtttccaaaaacctcaacctgaaactgaag
cctggggagaagaaacctggtttctgggtaccaagagtctgggccaaccctcgtaatttc
aactttgacaatgtgggaaatgccatgttggctctgtttgaagtgctgtcactcaaaggc
tgggtggaggtcagagatgtcattattcaccgcgttggaccgatccatggcatctacatc
catgtgtttgtgtttcttggatgcatgattggactcactctgtttgtcggcgtcgtcatt
gcaaacttcaatgagaacaagggtactgctctcctgactgtagaccagaggagatgggaa
gatctgaagagtcgactgaaaatagcccaacctctccacctacctcctcgcccagaaact
gggggtttccgggctaagatgtatgacatcactcaacatcccttcttcaaacggggcatt
gctgtactggtgctggcgcagtcggtgctgctgtcagtcaagtgggacgtcgacgatcaa
gtcacatttcctctcgccaccatgtctgtcgtcttcacctttatatttgtcctggaggtg
accatgaagctgatagccatgtctccagcgggttactggcagagccgacgcaatcgctac
gacctgctggtgacatcactgggtgtcatatggatcgtcctgcacttctcattactgaat
gcatacacctacatgatgggcacgtgtgtgattgtcttcagattcttcacaatatgcggg
aaacatgtgactctgaagatgctgctgctgactgtggtggtcagcatgtacaagagcttc
ttcatcatcgtagggatgttcctgcttctcctgtgctacgccttcgccggagtcgttctc
tttggaactgtaaagtatggagagaacattaaccggcacgccaacttctccacagcgggc
aaagctatcaccgttctcttccgtatcgtcacaggggaagattggaacaaaatcatgcat
gattgtatgttgcaggcccctttctgcaccccggataatcaccgctactgggagactgac
tgtggcaactacgctggagcgctgatctacttctgctccttctatgtcatcatagcttac
atcatgctcaacctactcgtagccatcatcgtggagaacttctccctcttctactccacc
gaggaggaccagctgctcagctataacgacctgaggcacttccaaatcatctggaacatg
gtggatgacaaacgcgagggcgtcatcccgacatccagagtaaagttcctgctccgcctg
ctcagaggcaggctggaggtggacctggacaaagacaagctgctgtttaaacacatgtgc
tatgagatggagcgactgcacagcggaggagatgtgaccttccatgatgtgctgagcatg
ctgtcgtatcgctcagtggacattaggaagtctctccagctggaggagctgttggccagg
gaacagctggagtacaccattgaagaagaggttgccaaacagaccatacgcatgtggctc
aagaagtgcctcaaaggcatccgagcgcagctgcagtcgtgttgcatcttccaaagcctg
agagagagccagcagcaggagctgagccgcctactcaacccccccagcatagagaccacc
gtgccaagcgaagaccacaacgctaacaacccagacaacccctcgcagcctgagatgagt
ggtctccagcagctcctgagccccacgttgtcagacagaggaggctacaggcaggactcc
tcggacctggggaggccgcagaggaagctgggacagtggcggctgcctgcaggtcgcaca
agtgtcaagtccatcgtgtgcaagatgaaccccgtcaacgacgaggcgtcttcggggtcg
gaggtgaagaagtggtggacccgtcagctgacagtggagagcgacgagagcggcgacgac
ctcatcgacatttag
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integrated database retrieval system
