Semicossyphus pulcher (California sheephead): 138592350
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Entry
138592350 CDS
T10596
Symbol
clasp1a
Name
(RefSeq) CLIP-associating protein 1a
KO
K16578
CLIP-associating protein 1/2
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spul03036
]
138592350 (clasp1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
spul04812
]
138592350 (clasp1a)
Chromosome and associated proteins [BR:
spul03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
138592350 (clasp1a)
Cytoskeleton proteins [BR:
spul04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
138592350 (clasp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
HEAT_EF3_N
CEP104-like_TOG
HEAT
TOR1L1_N
Sec7-like_HUS
Adaptin_N
Cnd1
MMS19_C
RTP1_C1
ParcG
HEAT_DAAF5
TAN
Paxt-1_C
TPR_20
Motif
Other DBs
NCBI-GeneID:
138592350
NCBI-ProteinID:
XP_069519227
LinkDB
All DBs
Position
Unknown
AA seq
1546 aa
AA seq
DB search
MMEPSMENCLAQVLQKDMGRRLQVGQEIIDYILDKEKSHDLEQDQTALDKMVDGIASSWV
NSSNFKVALLGLDLLSALVTRLQERFRAQVGTVLPSLIDRLGDAKDQVRDQDQTVLLKIM
EQAASPQYVWDRMLGGFKHKNNRTREGVCLCLIATLSTYGAQGLTLSKIVPHICNLLADP
TSQVRDGAMSSLVEIYRHVGERVRMDLSKKGLPQSRLNVIFSKFDEVQRSGNMIPSSGSD
KNFEDEDSVDGGRSSSSSSSKAPPGGRRTVVSSVRRPSSATTAKATAKEAAAGAVDEEDF
IKAFEDVPSIQIYSNREFEDQLTKIREVLSDDKHDWEHRVVALKKVRSVMLAGAAEYDGF
PQQLRLMEAPLKLSAKDLRSQVVREACITLGHLSSLLGNKFDHGAESIMPTLLNLVPNSA
KVMATSGMAAIRLILRHTHYPRLIPIITSNCTSKSVAVRRRCYEFLDLMLQEWHTNTLER
HVAVLTETIKKGIHDADSEARSIARKCYWGFHGHYSREAEHLFQALESTYQKALQSHLKS
SDSIVSLPQSDRSSSSSQESLNRPLSVKSVIGGSITRSKLVSTRVPSTSGSLQRSRSDID
VNAASSAKSRLSTVPASSPFGSAAALPPGSYASLDGTPGKSDGRVRTRRQSSGSVGGAST
SVVDSRGRSRAKVVSQSQPGSRSSSPGKLLGHSSGYGRVTRATVSASSTPADKRSRIPRS
QGCSRETSPSRMGLARSRIPRPSMSQGCSRDTSRESSRDTSPARGFTPLASRRHSRSTSA
LSTADPHGQSDRYGLIHQARISASVNAMRVLNTGTEVEAAVADALLLGDSRNKRKPMRRR
YESPGMYSDDDANSDASSACSERSYGSRNGGIPHYLRQTEDVAEILNHCASSNWSERKEG
LLGLQNLLKSQRILSRVELKRLCEIFTRMFADPHSKVFSMFLETLVDFVTVHREDLQDWL
FVLLTQLLKKMGADLLGSVQAKVQKALDITRDSFPFDQQFNILMRFIVDQTQTPNLKVKV
AILKYIECLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQVVLISLFELNTP
EFTMLLGALPKTFQDGATKLLHNHLKNSSNTSSSVGSPSNTIGRTPSRHTPSRTSPLTSP
TNCSHGGLSPSMMEYDTENMNSEEIYSSLRGVTEAIQSYSYRSQEDLNEPIRQEGKRDDA
AGREGVASSPGSDARLGLDVVEGGRTALDNKTSLLNTPSPRSFSGPRGREFAPYGYGETI
CTYDKSALKEAVFDDDVEQFRDCRRQESGENKMTLPKVFGPAKVGQDHSDMVADLLKELS
NHNERSEERKGALVELLKITREDSMAVWDEHFKTILLLLLETLGDKDHTIRALALRVLKE
ILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLAGSIHPEQCIKVLCPIVQ
TADYPINLAAIKMQTKVIERIAKDSLLQLLPDIIPGLLQGYDNTESSVRKASVFCLVAIY
SVIGEDLKPHLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSSHS
NT seq
4641 nt
NT seq
+upstream
nt +downstream
nt
atgatggagcccagcatggagaactgcctagctcaggtcctgcagaaggacatgggccga
cggctgcaggtggggcaggagatcattgattacattctggacaaagagaagtcccacgac
ctggagcaggatcagacggcgctggacaagatggtggacggcatcgccagctcctgggtc
aactctagcaacttcaaggtggctctgctgggtttggacctcttatctgccttagtgaca
cggttacaggagagattcagggcccaggtgggaacagttctgcccagccttatcgatcga
ttgggagatgcaaaagaccaggtgcgagaccaagaccaaacagtgctgctaaagatcatg
gaacaagctgccagcccgcagtacgtgtgggacagaatgctcggaggcttcaaacacaag
aacaacaggaccagagaaggagtgtgcctttgtctcatcgccacgctgagcacatatgga
gctcaaggcctgacccttagtaaaattgttcctcacatatgtaaccttttggcagacccc
acaagtcaggtacgtgacggggcaatgagcagcttggtggagatctaccgacatgtgggt
gagagggtgaggatggatctcagcaaaaaaggccttccacagtcacggttgaatgtaatc
ttcagcaaatttgatgaagtccaaagatccgggaacatgatcccctcctctggctcagat
aagaattttgaggatgaggactctgtggatggaggccggtcctcctcctcctcttcatcc
aaagcgccccccggtggcaggaggactgtagtgagctctgttagaagacccagctcggcc
accacagctaaggccacagctaaggaagcagctgcgggtgctgttgatgaagaggatttc
atcaaagcctttgaagacgttccctcgatccagatctactctaacagagagtttgaggac
cagctgaccaaaatcagagaagtgctgtctgatgacaaacatgactgggagcaccgagtt
gtggcgctgaagaaggtgcgttctgtcatgttggccggagcagcagagtatgatggtttc
cctcagcagctgcgtctcatggaggctccgcttaaactgtcagctaaagacctgcgctcg
caggtggtgcgagaggcctgcatcacactgggacatctgtcttcactgctgggcaacaag
tttgaccacggagcggagagcatcatgcccacgctgctgaaccttgtgcccaacagtgcc
aaagtcatggccacgtctggcatggctgccatccgcctcatcctcaggcacacacactac
ccacgtctcatccccatcatcaccagtaactgcacctccaaatccgtagcagtcagacga
cgctgttatgagttcttggatctcatgttacaagagtggcacactaatacactggagaga
catgtggctgttctgactgagaccatcaagaaaggcatacacgatgcggactctgaggcc
agatccatcgcaagaaagtgctattggggtttccatggtcactacagccgcgaggcagag
catctgtttcaggcgctggagtctacctatcagaaggcgctccagtctcacctgaagagc
tctgacagcatcgtgtctcttccccagtctgaccgctcctcctcgtcttcccaggagagc
cttaaccggccattgtctgtgaagagtgtcattggagggagcataacaagaagtaagctt
gtgagcaccagggtgccttccacgtctggttctctgcagcgttcacgtagcgacatcgat
gtaaacgccgcctccagcgccaagtcccgtctgtccaccgtccctgcctcctcaccgttc
ggctcggcggctgcacttcctccgggatcctacgcctcattagatggcactccgggtaaa
agtgatggtcgtgttcgtacccggagacaaagctcgggcagcgtgggcggggccagcacc
tccgtggtggacagtagaggtcgcagccgagccaaagtcgtctcacagtcccagcccggc
agtcgctccagctccccgggcaagctccttggccacagcagcggctacggccgggtcact
cgagccacggtgtcggcgtccagcacgccagcggacaagcgcagcaggatccctcgcagc
cagggctgcagccgcgagacgagccccagccgcatgggcctcgcccggagccgcattccc
cgtcccagcatgagtcagggctgcagtcgcgacacaagtcgtgagagcagccgcgacacc
agccccgctcggggcttcactcctctggcctcccgacgtcactcccgttcaaccagcgct
ctctccacagccgacccccacggccagtcagaccgatacggtttgattcaccaagcaaga
atctctgcgtcagtcaacgccatgagggtccttaacaccggcactgaggtggaggcagct
gttgctgacgctctgctgttaggagactccaggaataagaggaagccgatgaggaggagg
tacgaatcacccgggatgtactctgatgacgatgccaacagcgatgcgtccagtgcctgc
tcagagcgctcatatggctcgaggaacggaggcattccccattacctgcgccagacggag
gacgtggcggagatcctgaaccactgcgccagctccaactggtcagagaggaaggaaggc
ctgctgggcctgcagaacctcctcaagagccaaagaatactgagccgagtggagctgaag
agactgtgtgaaatcttcacaaggatgtttgcagatccacatagcaaggtgttcagcatg
tttctggagactctggtggacttcgtcacggtccacagggaggacctgcaggactggctt
tttgtcctgctcactcagctgctgaagaagatgggggcagacctgctgggctcagtccag
gccaaagtccagaaggctctggatatcacaagggactccttcccgttcgaccaacagttc
aacatcctgatgaggtttatcgtggatcagactcagactcctaatctcaaggtcaaagtg
gccattttgaagtacatcgagtgtctggctcggcagatggacccgacggactttgtgaac
tccagtgagacccgcctggccgtgtctcgcatcatcacctggaccacagaaccaaagagt
tctgatgtcaggaaggcggctcaggtggtgctgatctctttgttcgagctcaacacccca
gagttcaccatgctgctgggagctctgcccaagaccttccaggacggcgccaccaaactg
ctgcacaaccacctgaagaactccagcaacaccagcagcagcgtggggtctccgagcaat
accattggtcggacgccgtcacgccacacccccagcagaaccagccccctcacctctccg
acaaactgttcccacggaggattatctccaagcatgatggagtatgacaccgagaacatg
aactctgaggagatctacagctcgctgcgcggtgtcacagaggccatccagagctacagc
taccggagccaggaggacctgaacgagccgatcagacaggagggcaagagggacgacgca
gcaggaagagaaggcgtcgcgtcctctcccggctccgacgcccgcctcggcttagacgta
gtggaaggtggtcgcaccgccttagacaacaagacgtccctcctcaacacgccttcacct
cgctcgttctctgggccacgaggtcgtgaattcgctccgtacggctacggtgaaaccatc
tgcacgtatgacaagagcgccctgaaggaggccgtgtttgacgacgatgtggagcagttc
agagactgccgacgtcaggaaagtggtgaaaacaagatgacgctccccaaggtctttggt
cccgctaaagtcggtcaggaccactcagacatggtagccgacctgctcaaggaactgtcc
aatcacaacgagcgctctgaggagcgtaaaggcgccctggtggagctgctgaagatcaca
cgagaagacagcatggctgtgtgggatgaacactttaaaaccatcctcctcctcctgctg
gagacactgggtgataaagatcacacgatccgagccttggccctgcgagtgctgaaagaa
attctgaggaaccagccggcccgcttcaaaaactatgccgagctaaccatcatgaagacg
ctggaggctcacaaagactctcacaaggaggtggttcgtgcagcagaggaggcagcgtcc
accctggccggctccatccacccggagcagtgcatcaaggtgttgtgtcctattgtgcag
acagccgactaccccatcaacctggctgctatcaagatgcaaaccaaagtcattgaacgc
atcgccaaggactccttactgcagctgctgcccgacatcatccctggactcctgcagggc
tatgacaacacagagagcagcgttcgcaaggccagcgtgttctgtctggtggctatctac
tctgtgattggcgaggatctcaaaccccacctggcacagctcacgggcagcaagatgaag
ttactgaatctgtacatcaagcgcgcccagaccaccaacagcaatagcagcagttcctcg
gacgtctcctctcacagttaa
DBGET
integrated database retrieval system
