Semicossyphus pulcher (California sheephead): 138592412
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Entry
138592412 CDS
T10596
Symbol
prpf40a
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138592412 (prpf40a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spul03041
]
138592412 (prpf40a)
Spliceosome [BR:
spul03041
]
Complex A
U1 snRNP components
U1 related factors
138592412 (prpf40a)
Complex B
138592412 (prpf40a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
Motif
Other DBs
NCBI-GeneID:
138592412
NCBI-ProteinID:
XP_069519313
LinkDB
All DBs
Position
Unknown
AA seq
879 aa
AA seq
DB search
MSSSEANNGPNQAPPYPGVPPSGIPPPFMGPPGIPPHFPPMGMPPMGQRPPSMTPMPPGI
IPPGIMPPMGAPPMGQMPGMMPPMMPGMMMPPRMPAAAVQPTGPPGVDSAAAAPGTASTT
NGSPQEDQPKKKSLWTEHKSLDGKTYYYNTDSKQSTWEKPDDLKSPAEQMLSKCPWKEYK
SDTGKPYYYNSQTKESRWTKPKELEDLEAMIKAEENGTAEAAAPGTAAAPVVQTDNTATM
ATVMEAETATAVSEEQLSQAAVLHTAEVKIAEAPVASSESPAPTEVTASVEVAKEERPEL
QKKTYKWNTKEEAKQAFKELLKEKGVSSNSSWEQAMKMIINDPRYSALPKLSEKKQAFNA
YKVQTEKEEKEEARIKYKESKETFQRFLENHDKMTSTTRYKKAEQMFNEQEVWSCVPERD
RLEIYEDVLFYLAKKEKEQAKQLRKRNWEALKNILDNMANVTYRTTWSEAQQYLLDNPTF
AEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKTLLRERRRQRKNRESFQKFLDELHD
HGQLHSMSAWMEMYPTLSSDIRFANMLGQPGSTPLDLFKFYVEDLKARYHDEKRIIKDIL
KDKGFLVEVNTSFDDFGSVISSDKRATTLDAGNIKLAFNSLLEKAEAREREREKEEARKM
KRKEAAFKNMLKQATPPLEPEASWEGVRERFLKESAFEDVTLESERKRIFKDFMHVLEHE
CQHHHSKTKKHSKKSKKHHRKRSRSRSGSESEEEEYHKKKKRSQSKSPSERSSSGESERS
YKKSKKHKKKGKKRRHKSASPDSDNEKRGRERDGKREKDLEKDKENDKSRGKSRSDSKQK
SPKRKAVKEEGGWDTSGSELSEGELEKRRRTLLEQLDAP
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcatcggaggctaataatggcccgaaccaagcgccaccttatccaggtgtaccg
ccctcagggatacctcccccgtttatgggaccaccaggaataccgcctcatttccctcca
atgggaatgcctcccatgggacagagaccgcctagcatgactcctatgcctcctggtata
attccccctggtataatgccgccaatgggggctccaccaatgggacagatgccaggcatg
atgccacctatgatgcccgggatgatgatgccccctcgcatgccagctgcggctgtacaa
ccgacgggaccgcctggtgttgactccgcagctgctgcacctggaacagctagtacaaca
aatggatctccacaggaagaccagccaaagaagaagtccctgtggacagaacacaaatca
ctggatgggaagacttattattacaacacagactccaagcagtccacatgggagaagccg
gatgacctcaaatctcctgcagagcaaatgctctctaaatgcccttggaaggagtacaag
tccgacacagggaagccttattattacaactctcagacgaaggagtccagatggaccaaa
cccaaggagctggaggatctggaagcgatgatcaaagcagaggagaatgggacggcagag
gctgcagctcccggcaccgcagcagctcctgtagttcaaacagataatacagccactatg
gcaacagtaatggaggcggaaactgcaacagcggtctcagaggagcaactgtctcaggcg
gccgtgcttcacacagctgaggtgaagattgcagaagcacctgtggcttcttcagagagc
ccggcccctacagaggtcacagccagcgttgaagtcgcaaaggaagaacggccagagctt
cagaagaaaacttacaagtggaacacaaaagaggaggccaagcaggccttcaaagagctg
ctgaaagagaagggtgtgtcctcaaactcctcctgggagcaggctatgaaaatgatcatc
aatgaccctcgctacagtgcgctgcccaaactgagcgagaagaaacaagcgttcaacgcc
tacaaagtccaaacagagaaggaggagaaagaggaggccagaattaaatacaaggagtcc
aaagagacctttcagaggttcttggagaaccacgacaagatgacgtccaccaccagatac
aagaaagcagagcagatgtttaatgagcaggaggtgtggagctgtgtgccagagagagac
aggctggagatctatgaagatgttctgttctacctcgccaagaaagagaaggaacaagcc
aagcagctgaggaagaggaactgggaagctctgaagaacattctggacaacatggccaac
gtcacttaccgcaccacctggtctgaggcgcagcagtacctgctggacaaccctaccttt
gcggaggacgaggagctgcagaatatggacaaagaggatgccctcatttgttttgaagag
cacatccgggcgctggagaaggaggaggaggaagagaaacagaagactcttctcagggag
aggaggcgacagcgcaagaacagagagtccttccagaaattcctcgatgagctccacgac
cacggccagctccactccatgtccgcctggatggagatgtacccgaccctgagctcagac
atccgctttgccaacatgctgggccagccgggctccactcccctggatctgttcaaattc
tatgtggaagatttaaaggcccgctaccacgacgagaagaggatcatcaaagatattctt
aaggacaaaggcttcctggtagaagtcaacaccagctttgacgacttcggatccgtgatc
agctcagacaagagagccaccacgctggatgctgggaacataaagctcgcattcaacagc
ttactggagaaggcagaagccagagagagagagcgagagaaggaggaggcgaggaagatg
aaaaggaaagaggcagcctttaaaaacatgctgaagcaggcaacaccaccgctggagcca
gaggcatcatgggagggggtgagagagaggttcttaaaagagtcggcctttgaagatgtg
actctggagtcggagaggaaacggatattcaaagacttcatgcacgtcttagagcatgaa
tgccagcatcaccactccaagacaaagaagcactcgaagaagtccaagaagcaccacagg
aaacgatcccgctctcgatcgggctcagagtctgaagaagaggaataccacaagaagaag
aagaggtcacagtccaaatctccctctgaacgctcgtctagtggagaatctgagagaagc
tataaaaaatctaagaagcacaagaagaagggcaagaagagacgccacaagtctgcgtcg
ccagactctgacaacgagaagcgaggacgagagcgtgacggaaagcgggagaaggactta
gagaaagacaaagagaacgacaagtctcgggggaaatctcgctcggactctaaacagaag
tctcctaaaagaaaagcagtaaaagaagagggcggctgggacacgtcaggcagcgagctg
agtgaaggagagctggagaaaagaagaagaactttgctggagcagctggacgcaccttga
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integrated database retrieval system
