KEGG   Semicossyphus pulcher (California sheephead): 138592448
Entry
138592448         CDS       T10596                                 
Symbol
wdr3
Name
(RefSeq) WD repeat-containing protein 3
  KO
K14556  U3 small nucleolar RNA-associated protein 12
Organism
spul  Semicossyphus pulcher (California sheephead)
Pathway
spul03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:spul00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    138592448 (wdr3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:spul03009]
    138592448 (wdr3)
Ribosome biogenesis [BR:spul03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    138592448 (wdr3)
SSDB
Motif
Pfam: Beta-prop_WDR3_2nd Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40 Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Utp12 NBCH_WD40 DSE1_N Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_WDR41 ANAPC4_WD40 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_VPS8 Beta-prop_NOL10_N Beta-prop_SCAP ASA1 CFAP251_N PEP5_VPS11_N Beta-prop_Aladin Beta-prop_WDR19_1st Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_EIPR1 Beta-prop_ACSF4 Beta-prop_HPS5 Beta-prop_SPT8 WDR54 RMC1_N VPS11_N WD40_like Beta-prop_WDR75_2nd Beta-prop_WDR35_TULP_N Utp21 Beta-prop_LRRK2 PAC11 Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 138592448
NCBI-ProteinID: XP_069519361
LinkDB
Position
Unknown
AA seq 939 aa
MGLTKQYLRYVASAVFGVIGSQKANIAYVTQRGGERGRYVAVAACEQVFIWDVRKGEKVL
ILQGQKHEVTFLCPSPDGIHIAVGYEDGAVRIFSLMNGESNVSFNGHKSAVSVIHYDKLG
ARLVTGSKDTEVIVWDIINECGLYRLRGHKDVITQALFLKDKNLLVTSSKDSFVKWWDLD
TQHCFKTMVGHRSEVWGMALLNQENRLLTGSADSELRAWDIKYLQEEKAQGEPQVKKGKT
LLDDDDDEDEGEDENVEERILSCKKAGSILREARDRVVSMATDARARVIACHGNDSVLEL
FTVLSEEEVQKKMTKKMKKAKKKAAKAQEEADEEAAEPVVERMLKDEIIRLTNIKASSKI
RWVDCLSCAGGELKVALLLQNNTIETYSLKTSDKTPTANKTARLTLGGHRTDVRTLAFSS
DNLAVLSASGDTVKVWNRSTLQVIRTMACDYALCSLFVPGDRQIILGTKSGKLQIFELAS
GSLLETVDAHDGALWSLCLAPDQRGIVTGSADKKVKFWEFELIKDEGSSQKRLTVKHTRT
LQLEEDVLCVKFSPDHRLLAVSLLDCTVKVFYTDSLKFFLSLYGHKLPVLCLDISHDNTL
IATGSADRNVKIWGLDFGDCHRSMFAHDDSVMFLQFVPKTHLFFTAGKDKKIKQWDADKF
EHIQTLEGHHREVWCLTISPNGDHIVSTSHDKSLRLWERTREPIILEEEREMEREAEFEE
SMAKGDMPVVPGETQGEAAPAAKKTVETVKAAERIMEALELFKEEARKMEEYKYACERAG
NEVPPPKPNPILVAFGNVTPSRYVLDVIKKVRSSELEVSLLVLPFPYIPELLKLFNSYIE
QGLEVELVCRCLFFLLKIHFGQISSNQMLLSVIDELRTNTLSKVREIRDVMGFNSAALQF
LQREIESKEDVMFFAEATGQLKEKKKRRRKRERAILTIA
NT seq 2820 nt   +upstreamnt  +downstreamnt
atggggttgaccaagcagtacctgcgctacgttgccagtgcagtgtttggagtaattggc
agccagaaagccaacatcgcatatgtgacccagcgagggggagagagggggcgctacgtc
gctgtcgctgcatgtgaacaggtgttcatctgggatgttcggaaaggagagaaggtcctg
atcctgcagggccagaaacacgaggtgaccttcctctgcccctcacccgatggcatccac
atcgctgtgggttatgaggacggcgctgtgcgaatcttcagcttgatgaacggcgagagc
aatgtctcctttaatggccacaagtctgctgtcagcgtcatacactatgacaagctcgga
gctcggctcgtcactgggtccaaggacacagaggtgatcgtgtgggacatcatcaatgag
tgtgggctgtacaggctgagaggccataaagacgtcatcacacaggctttattcctcaaa
gacaagaacctcctggtcacaagctccaaggacagttttgtgaagtggtgggacctggac
acacagcactgcttcaagaccatggtgggccatcgcagtgaggtgtggggcatggcgctg
ctgaaccaggagaacaggctgctgacaggctcggcagacagcgagctgcgagcctgggac
atcaagtacctgcaggaggagaaagctcaaggcgagccacaggtgaagaaggggaaaact
ctgcttgatgacgacgatgatgaagacgaaggggaggatgaaaatgttgaagagcggatc
ttgagttgtaagaaagccggctccatcctgcgagaggccagagaccgagtcgtttcgatg
gcaacagacgccagagccagagtcatcgcctgccatggcaatgactcggtcctggagctc
ttcacggtgctgtcagaggaggaggtgcagaagaaaatgacaaagaagatgaagaaagcc
aaaaagaaggcagcaaaagctcaggaagaagcagacgaggaggcggccgagccggttgtg
gagaggatgctgaaggacgagatcatcagactgacgaacatcaaggcctcatcaaagatc
aggtgggtggactgcctgtcctgcgcaggtggggagctgaaggtggcgctgctcctgcag
aacaacacgatcgagacctacagcctgaagacgtcagacaagacccccacggccaataag
acggctcgcctcacgctcggcggccaccgcacagacgtccgcacgctggccttcagctcg
gacaacctggccgtcctctcggcctccggagacaccgtcaaagtttggaacaggtccact
ctgcaggtgattcgcacaatggcctgtgattacgccctctgctccctgtttgtgccagga
gacagacagatcatcctgggaactaagagcgggaagctgcagatcttcgagctggcctca
ggaagcctcctggagacggtcgatgcccacgatggagctctgtggtcgctgtgcctcgca
ccagatcagagagggattgtcacaggaagtgcagataagaaagtgaagttctgggagttt
gagctgataaaggacgaagggagcagccagaagaggctgacagtgaaacacacgcgcact
ctgcagttggaggaagacgttttgtgtgtgaagttctctcccgaccacagactgctggct
gtctctttgttggactgcacggtcaaggtcttctacacagactcactaaagttcttcttg
tctctgtatggacacaagctgcctgtactgtgtctggacatctcacatgacaacacgctc
atcgccacgggctccgccgacagaaacgtgaagatctggggtttggacttcggcgactgt
caccgctccatgttcgctcatgacgacagcgtcatgttcctccagtttgtccccaagact
catctgttcttcacagcaggaaaggacaagaagatcaaacagtgggacgccgacaagttt
gagcacatccagactctcgagggccatcatcgggaggtttggtgtctgaccatcagccca
aacggtgaccacatcgtgtcgacatcgcacgacaaatccctgcgtctgtgggagaggacg
agggagcccatcatcctggaggaggagagagagatggagcgagaagcagagtttgaggag
agcatggccaaaggagacatgcctgtggtacctggagagactcaaggagaggcagcacca
gccgccaagaagacggttgagacggtcaaagctgctgagcgaatcatggaggctctggaa
cttttcaaagaggaagccaggaagatggaggagtataaatatgcttgtgagagagcaggc
aacgaggttcctccaccgaaacccaacccgatcctcgttgcctttgggaatgttacaccg
tctcgctacgtgttagacgtcataaagaaagtcagatcaagtgagctggaggtgtctctg
ctggtgttaccgttcccttacatccccgagctgctgaagctgttcaacagctacatcgag
cagggcctggaggtggagctggtctgccgctgcctcttcttcctgctcaagatccacttt
ggtcagatctccagtaaccagatgctgctgtcggtcatagacgagctacggaccaatact
ctgtcaaaagtgcgagagatcagagacgtgatgggcttcaacagcgcagcgctgcagttc
ctccagcgggagattgagagcaaagaggacgtgatgttctttgcggaggccacgggtcag
ctgaaggagaagaagaagaggaggaggaagagggagcgagccatcctgaccatcgcttaa

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